CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3278
PRO 10010.0120
GLN 10020.0047
ILE 10030.0034
THR 10040.0091
LEU 10050.0067
TRP 10060.0058
LYS 10070.0083
LYS 10070.0087
ARG 10080.0067
ARG 10080.0067
PRO 10090.0054
LEU 10100.0039
VAL 10110.0036
THR 10120.0112
ILE 10130.0102
LYS 10140.0175
ILE 10150.0104
GLY 10160.0105
GLY 10170.0303
GLN 10180.0212
LEU 10190.0238
LYS 10200.0112
GLU 10210.0047
GLU 10210.0047
ALA 10220.0045
LEU 10230.0078
LEU 10240.0057
ASP 10250.0071
THR 10260.0051
GLY 10270.0032
ALA 10280.0045
ASP 10290.0038
ASP 10300.0060
THR 10310.0082
VAL 10320.0081
VAL 10320.0082
LEU 10330.0064
GLU 10340.0074
GLU 10350.0071
MET 10360.0119
MET 10360.0119
ASN 10370.0180
LEU 10380.0125
PRO 10390.0127
GLY 10400.0257
ARG 10410.0121
TRP 10420.0202
LYS 10430.0068
PRO 10440.0200
LYS 10450.0249
MET 10460.0374
ILE 10470.0245
GLY 10480.0414
GLY 10490.0418
ILE 10500.0610
GLY 10510.3278
GLY 10520.0870
PHE 10530.0166
ILE 10540.0272
LYS 10550.0400
VAL 10560.0206
ARG 10570.0078
GLN 10580.0079
TYR 10590.0149
ASP 10600.0152
GLN 10610.0186
ILE 10620.0067
LEU 10630.0042
ILE 10640.0064
ILE 10640.0065
GLU 10650.0110
ILE 10660.0079
CYS 10670.0110
GLY 10680.0184
HIS 10690.0112
LYS 10700.0091
ALA 10710.0005
ILE 10720.0060
GLY 10730.0168
THR 10740.0116
VAL 10750.0109
LEU 10760.0072
VAL 10770.0076
GLY 10780.0123
PRO 10790.0292
THR 10800.0181
PRO 10810.0272
VAL 10820.0159
ASN 10830.0085
ILE 10840.0096
ILE 10840.0096
ILE 10850.0080
GLY 10860.0076
ARG 10870.0064
ASN 10880.0089
LEU 10890.0081
LEU 10900.0064
THR 10910.0079
THR 10910.0079
THR 10910.0079
GLN 10920.0064
ILE 10930.0015
GLY 10940.0037
CYS 10950.0026
THR 10960.0010
LEU 10970.0009
ASN 10980.0034
PHE 10990.0068
PRO 10010.0120
GLN 10020.0047
ILE 10030.0034
THR 10040.0091
LEU 10050.0067
TRP 10060.0058
LYS 10070.0083
LYS 10070.0087
ARG 10080.0067
ARG 10080.0067
PRO 10090.0054
LEU 10100.0039
VAL 10110.0036
THR 10120.0112
ILE 10130.0102
LYS 10140.0175
ILE 10150.0104
GLY 10160.0105
GLY 10170.0303
GLN 10180.0212
LEU 10190.0238
LYS 10200.0112
GLU 10210.0047
GLU 10210.0047
ALA 10220.0045
LEU 10230.0078
LEU 10240.0057
ASP 10250.0071
THR 10260.0051
GLY 10270.0032
ALA 10280.0045
ASP 10290.0038
ASP 10300.0060
THR 10310.0082
VAL 10320.0081
VAL 10320.0082
LEU 10330.0064
GLU 10340.0074
GLU 10350.0071
MET 10360.0119
MET 10360.0119
ASN 10370.0180
LEU 10380.0125
PRO 10390.0127
GLY 10400.0257
ARG 10410.0121
TRP 10420.0202
LYS 10430.0068
PRO 10440.0200
LYS 10450.0249
MET 10460.0374
ILE 10470.0245
GLY 10480.0414
GLY 10490.0418
ILE 10500.0610
GLY 10510.3278
GLY 10520.0870
PHE 10530.0166
ILE 10540.0272
LYS 10550.0400
VAL 10560.0206
ARG 10570.0078
GLN 10580.0079
TYR 10590.0149
ASP 10600.0152
GLN 10610.0186
ILE 10620.0067
LEU 10630.0042
ILE 10640.0064
ILE 10640.0065
GLU 10650.0110
ILE 10660.0079
CYS 10670.0110
GLY 10680.0184
HIS 10690.0112
LYS 10700.0091
ALA 10710.0005
ILE 10720.0060
GLY 10730.0168
THR 10740.0116
VAL 10750.0109
LEU 10760.0072
VAL 10770.0076
GLY 10780.0123
PRO 10790.0292
THR 10800.0181
PRO 10810.0272
VAL 10820.0159
ASN 10830.0085
ILE 10840.0096
ILE 10840.0096
ILE 10850.0080
GLY 10860.0076
ARG 10870.0064
ASN 10880.0089
LEU 10890.0081
LEU 10900.0064
THR 10910.0079
THR 10910.0079
THR 10910.0079
GLN 10920.0064
ILE 10930.0015
GLY 10940.0037
CYS 10950.0026
THR 10960.0010
LEU 10970.0009
ASN 10980.0034
PHE 10990.0068

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.