CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 41  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2852
PRO 10010.0193
GLN 10020.0138
ILE 10030.0050
THR 10040.0134
LEU 10050.0142
TRP 10060.0166
LYS 10070.0144
LYS 10070.0144
ARG 10080.0138
ARG 10080.0138
PRO 10090.0126
LEU 10100.0174
VAL 10110.0169
THR 10120.0198
ILE 10130.0115
LYS 10140.0154
ILE 10150.0117
GLY 10160.0147
GLY 10170.0467
GLN 10180.0303
LEU 10190.0281
LYS 10200.0194
GLU 10210.0196
GLU 10210.0196
ALA 10220.0133
LEU 10230.0098
LEU 10240.0067
ASP 10250.0036
THR 10260.0049
GLY 10270.0039
ALA 10280.0036
ASP 10290.0059
ASP 10300.0034
THR 10310.0028
VAL 10320.0039
VAL 10320.0039
LEU 10330.0024
GLU 10340.0080
GLU 10350.0176
MET 10360.0170
MET 10360.0169
ASN 10370.0285
LEU 10380.0210
PRO 10390.0224
GLY 10400.0341
ARG 10410.0178
TRP 10420.0325
LYS 10430.0186
PRO 10440.0087
LYS 10450.0150
MET 10460.0197
ILE 10470.0122
GLY 10480.0143
GLY 10490.0287
ILE 10500.0464
GLY 10510.2852
GLY 10520.0718
PHE 10530.0180
ILE 10540.0308
LYS 10550.0283
VAL 10560.0115
ARG 10570.0092
GLN 10580.0125
TYR 10590.0184
ASP 10600.0248
GLN 10610.0167
ILE 10620.0118
LEU 10630.0210
ILE 10640.0153
ILE 10640.0153
GLU 10650.0143
ILE 10660.0126
CYS 10670.0158
GLY 10680.0186
HIS 10690.0219
LYS 10700.0268
ALA 10710.0221
ILE 10720.0222
GLY 10730.0153
THR 10740.0104
VAL 10750.0074
LEU 10760.0024
VAL 10770.0076
GLY 10780.0108
PRO 10790.0180
THR 10800.0155
PRO 10810.0219
VAL 10820.0088
ASN 10830.0056
ILE 10840.0042
ILE 10840.0042
ILE 10850.0035
GLY 10860.0035
ARG 10870.0102
ASN 10880.0106
LEU 10890.0132
LEU 10900.0137
THR 10910.0191
THR 10910.0190
THR 10910.0189
GLN 10920.0216
ILE 10930.0204
GLY 10940.0163
CYS 10950.0144
THR 10960.0092
LEU 10970.0068
ASN 10980.0137
PHE 10990.0166
PRO 10010.0193
GLN 10020.0138
ILE 10030.0050
THR 10040.0134
LEU 10050.0142
TRP 10060.0166
LYS 10070.0144
LYS 10070.0144
ARG 10080.0138
ARG 10080.0138
PRO 10090.0126
LEU 10100.0174
VAL 10110.0169
THR 10120.0198
ILE 10130.0115
LYS 10140.0154
ILE 10150.0117
GLY 10160.0147
GLY 10170.0467
GLN 10180.0303
LEU 10190.0281
LYS 10200.0194
GLU 10210.0196
GLU 10210.0196
ALA 10220.0133
LEU 10230.0098
LEU 10240.0067
ASP 10250.0036
THR 10260.0049
GLY 10270.0039
ALA 10280.0036
ASP 10290.0059
ASP 10300.0034
THR 10310.0028
VAL 10320.0039
VAL 10320.0039
LEU 10330.0024
GLU 10340.0080
GLU 10350.0176
MET 10360.0170
MET 10360.0169
ASN 10370.0285
LEU 10380.0210
PRO 10390.0224
GLY 10400.0341
ARG 10410.0178
TRP 10420.0325
LYS 10430.0186
PRO 10440.0087
LYS 10450.0150
MET 10460.0197
ILE 10470.0122
GLY 10480.0143
GLY 10490.0287
ILE 10500.0464
GLY 10510.2852
GLY 10520.0718
PHE 10530.0180
ILE 10540.0308
LYS 10550.0283
VAL 10560.0115
ARG 10570.0092
GLN 10580.0125
TYR 10590.0184
ASP 10600.0248
GLN 10610.0167
ILE 10620.0118
LEU 10630.0210
ILE 10640.0153
ILE 10640.0153
GLU 10650.0143
ILE 10660.0126
CYS 10670.0158
GLY 10680.0186
HIS 10690.0219
LYS 10700.0268
ALA 10710.0221
ILE 10720.0222
GLY 10730.0153
THR 10740.0104
VAL 10750.0074
LEU 10760.0024
VAL 10770.0076
GLY 10780.0108
PRO 10790.0180
THR 10800.0155
PRO 10810.0219
VAL 10820.0088
ASN 10830.0056
ILE 10840.0042
ILE 10840.0042
ILE 10850.0035
GLY 10860.0035
ARG 10870.0102
ASN 10880.0106
LEU 10890.0132
LEU 10900.0137
THR 10910.0191
THR 10910.0190
THR 10910.0189
GLN 10920.0216
ILE 10930.0204
GLY 10940.0163
CYS 10950.0144
THR 10960.0092
LEU 10970.0068
ASN 10980.0137
PHE 10990.0166

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.