CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 45  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0871
PRO 10010.0622
GLN 10020.0436
ILE 10030.0380
THR 10040.0298
LEU 10050.0275
TRP 10060.0308
LYS 10070.0361
LYS 10070.0348
ARG 10080.0308
ARG 10080.0307
PRO 10090.0213
LEU 10100.0147
VAL 10110.0071
THR 10120.0109
ILE 10130.0096
LYS 10140.0184
ILE 10150.0167
GLY 10160.0199
GLY 10170.0409
GLN 10180.0242
LEU 10190.0227
LYS 10200.0097
GLU 10210.0044
GLU 10210.0044
ALA 10220.0070
LEU 10230.0135
LEU 10240.0157
ASP 10250.0097
THR 10260.0194
GLY 10270.0153
ALA 10280.0171
ASP 10290.0205
ASP 10300.0095
THR 10310.0085
VAL 10320.0143
VAL 10320.0145
LEU 10330.0178
GLU 10340.0236
GLU 10350.0265
MET 10360.0194
MET 10360.0193
ASN 10370.0224
LEU 10380.0087
PRO 10390.0068
GLY 10400.0011
ARG 10410.0039
TRP 10420.0078
LYS 10430.0092
PRO 10440.0111
LYS 10450.0111
MET 10460.0225
ILE 10470.0191
GLY 10480.0487
GLY 10490.0382
ILE 10500.0246
GLY 10510.0871
GLY 10520.0242
PHE 10530.0189
ILE 10540.0176
LYS 10550.0229
VAL 10560.0167
ARG 10570.0151
GLN 10580.0119
TYR 10590.0096
ASP 10600.0137
GLN 10610.0178
ILE 10620.0166
LEU 10630.0173
ILE 10640.0126
ILE 10640.0126
GLU 10650.0080
ILE 10660.0111
CYS 10670.0166
GLY 10680.0122
HIS 10690.0150
LYS 10700.0079
ALA 10710.0088
ILE 10720.0166
GLY 10730.0158
THR 10740.0126
VAL 10750.0121
LEU 10760.0128
VAL 10770.0174
GLY 10780.0243
PRO 10790.0408
THR 10800.0323
PRO 10810.0512
VAL 10820.0266
ASN 10830.0171
ILE 10840.0147
ILE 10840.0147
ILE 10850.0080
GLY 10860.0088
ARG 10870.0205
ASN 10880.0161
LEU 10890.0124
LEU 10900.0168
THR 10910.0195
THR 10910.0195
THR 10910.0199
GLN 10920.0106
ILE 10930.0108
GLY 10940.0213
CYS 10950.0307
THR 10960.0393
LEU 10970.0371
ASN 10980.0477
PHE 10990.0424
PRO 10010.0622
GLN 10020.0436
ILE 10030.0380
THR 10040.0298
LEU 10050.0275
TRP 10060.0308
LYS 10070.0361
LYS 10070.0348
ARG 10080.0308
ARG 10080.0307
PRO 10090.0213
LEU 10100.0147
VAL 10110.0071
THR 10120.0109
ILE 10130.0096
LYS 10140.0184
ILE 10150.0167
GLY 10160.0199
GLY 10170.0409
GLN 10180.0242
LEU 10190.0227
LYS 10200.0097
GLU 10210.0044
GLU 10210.0044
ALA 10220.0070
LEU 10230.0135
LEU 10240.0157
ASP 10250.0097
THR 10260.0194
GLY 10270.0153
ALA 10280.0171
ASP 10290.0205
ASP 10300.0095
THR 10310.0085
VAL 10320.0143
VAL 10320.0145
LEU 10330.0178
GLU 10340.0236
GLU 10350.0265
MET 10360.0194
MET 10360.0193
ASN 10370.0224
LEU 10380.0087
PRO 10390.0068
GLY 10400.0011
ARG 10410.0039
TRP 10420.0078
LYS 10430.0092
PRO 10440.0111
LYS 10450.0111
MET 10460.0225
ILE 10470.0191
GLY 10480.0487
GLY 10490.0382
ILE 10500.0246
GLY 10510.0871
GLY 10520.0242
PHE 10530.0189
ILE 10540.0176
LYS 10550.0229
VAL 10560.0167
ARG 10570.0151
GLN 10580.0119
TYR 10590.0096
ASP 10600.0137
GLN 10610.0178
ILE 10620.0166
LEU 10630.0173
ILE 10640.0126
ILE 10640.0126
GLU 10650.0080
ILE 10660.0111
CYS 10670.0166
GLY 10680.0122
HIS 10690.0150
LYS 10700.0079
ALA 10710.0088
ILE 10720.0166
GLY 10730.0158
THR 10740.0126
VAL 10750.0121
LEU 10760.0128
VAL 10770.0174
GLY 10780.0243
PRO 10790.0408
THR 10800.0323
PRO 10810.0512
VAL 10820.0266
ASN 10830.0171
ILE 10840.0147
ILE 10840.0147
ILE 10850.0080
GLY 10860.0088
ARG 10870.0205
ASN 10880.0161
LEU 10890.0124
LEU 10900.0168
THR 10910.0195
THR 10910.0195
THR 10910.0199
GLN 10920.0106
ILE 10930.0108
GLY 10940.0213
CYS 10950.0307
THR 10960.0393
LEU 10970.0371
ASN 10980.0477
PHE 10990.0424

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.