CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 50  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0850
PRO 10010.0419
GLN 10020.0413
ILE 10030.0165
THR 10040.0070
LEU 10050.0093
TRP 10060.0261
LYS 10070.0231
LYS 10070.0228
ARG 10080.0178
ARG 10080.0177
PRO 10090.0116
LEU 10100.0169
VAL 10110.0190
THR 10120.0177
ILE 10130.0055
LYS 10140.0074
ILE 10150.0171
GLY 10160.0250
GLY 10170.0658
GLN 10180.0355
LEU 10190.0154
LYS 10200.0096
GLU 10210.0124
GLU 10210.0123
ALA 10220.0037
LEU 10230.0080
LEU 10240.0075
ASP 10250.0068
THR 10260.0059
GLY 10270.0074
ALA 10280.0056
ASP 10290.0130
ASP 10300.0075
THR 10310.0135
VAL 10320.0169
VAL 10320.0170
LEU 10330.0160
GLU 10340.0163
GLU 10350.0166
MET 10360.0079
MET 10360.0078
ASN 10370.0078
LEU 10380.0135
PRO 10390.0339
GLY 10400.0850
ARG 10410.0530
TRP 10420.0218
LYS 10430.0223
PRO 10440.0213
LYS 10450.0182
MET 10460.0168
ILE 10470.0259
GLY 10480.0349
GLY 10490.0169
ILE 10500.0320
GLY 10510.0210
GLY 10520.0783
PHE 10530.0352
ILE 10540.0341
LYS 10550.0180
VAL 10560.0157
ARG 10570.0157
GLN 10580.0114
TYR 10590.0144
ASP 10600.0373
GLN 10610.0218
ILE 10620.0295
LEU 10630.0293
ILE 10640.0138
ILE 10640.0137
GLU 10650.0083
ILE 10660.0105
CYS 10670.0219
GLY 10680.0260
HIS 10690.0150
LYS 10700.0170
ALA 10710.0107
ILE 10720.0195
GLY 10730.0170
THR 10740.0221
VAL 10750.0195
LEU 10760.0144
VAL 10770.0134
GLY 10780.0166
PRO 10790.0245
THR 10800.0243
PRO 10810.0530
VAL 10820.0213
ASN 10830.0123
ILE 10840.0147
ILE 10840.0147
ILE 10850.0095
GLY 10860.0069
ARG 10870.0099
ASN 10880.0125
LEU 10890.0108
LEU 10900.0127
THR 10910.0177
THR 10910.0176
THR 10910.0175
GLN 10920.0148
ILE 10930.0117
GLY 10940.0146
CYS 10950.0146
THR 10960.0138
LEU 10970.0126
ASN 10980.0271
PHE 10990.0222
PRO 10010.0419
GLN 10020.0413
ILE 10030.0165
THR 10040.0070
LEU 10050.0093
TRP 10060.0261
LYS 10070.0231
LYS 10070.0228
ARG 10080.0178
ARG 10080.0177
PRO 10090.0116
LEU 10100.0169
VAL 10110.0190
THR 10120.0177
ILE 10130.0055
LYS 10140.0074
ILE 10150.0171
GLY 10160.0250
GLY 10170.0658
GLN 10180.0355
LEU 10190.0154
LYS 10200.0096
GLU 10210.0124
GLU 10210.0123
ALA 10220.0037
LEU 10230.0080
LEU 10240.0075
ASP 10250.0068
THR 10260.0059
GLY 10270.0074
ALA 10280.0056
ASP 10290.0130
ASP 10300.0075
THR 10310.0135
VAL 10320.0169
VAL 10320.0170
LEU 10330.0160
GLU 10340.0163
GLU 10350.0166
MET 10360.0079
MET 10360.0078
ASN 10370.0078
LEU 10380.0135
PRO 10390.0339
GLY 10400.0850
ARG 10410.0530
TRP 10420.0218
LYS 10430.0223
PRO 10440.0213
LYS 10450.0182
MET 10460.0168
ILE 10470.0259
GLY 10480.0349
GLY 10490.0169
ILE 10500.0320
GLY 10510.0210
GLY 10520.0783
PHE 10530.0352
ILE 10540.0341
LYS 10550.0180
VAL 10560.0157
ARG 10570.0157
GLN 10580.0114
TYR 10590.0144
ASP 10600.0373
GLN 10610.0218
ILE 10620.0295
LEU 10630.0293
ILE 10640.0138
ILE 10640.0137
GLU 10650.0083
ILE 10660.0105
CYS 10670.0219
GLY 10680.0260
HIS 10690.0150
LYS 10700.0170
ALA 10710.0107
ILE 10720.0195
GLY 10730.0170
THR 10740.0221
VAL 10750.0195
LEU 10760.0144
VAL 10770.0134
GLY 10780.0166
PRO 10790.0245
THR 10800.0243
PRO 10810.0530
VAL 10820.0213
ASN 10830.0123
ILE 10840.0147
ILE 10840.0147
ILE 10850.0095
GLY 10860.0069
ARG 10870.0099
ASN 10880.0125
LEU 10890.0108
LEU 10900.0127
THR 10910.0177
THR 10910.0176
THR 10910.0175
GLN 10920.0148
ILE 10930.0117
GLY 10940.0146
CYS 10950.0146
THR 10960.0138
LEU 10970.0126
ASN 10980.0271
PHE 10990.0222

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.