CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 52  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1642
PRO 10010.0115
GLN 10020.0089
ILE 10030.0101
THR 10040.0153
LEU 10050.0086
TRP 10060.0100
LYS 10070.0071
LYS 10070.0070
ARG 10080.0082
ARG 10080.0081
PRO 10090.0068
LEU 10100.0077
VAL 10110.0072
THR 10120.0064
ILE 10130.0075
LYS 10140.0112
ILE 10150.0198
GLY 10160.0278
GLY 10170.0670
GLN 10180.0284
LEU 10190.0125
LYS 10200.0033
GLU 10210.0021
GLU 10210.0021
ALA 10220.0042
LEU 10230.0059
LEU 10240.0041
ASP 10250.0062
THR 10260.0047
GLY 10270.0066
ALA 10280.0074
ASP 10290.0076
ASP 10300.0071
THR 10310.0086
VAL 10320.0123
VAL 10320.0121
LEU 10330.0118
GLU 10340.0118
GLU 10350.0160
MET 10360.0148
MET 10360.0148
ASN 10370.0180
LEU 10380.0128
PRO 10390.0099
GLY 10400.0179
ARG 10410.0115
TRP 10420.0167
LYS 10430.0158
PRO 10440.0123
LYS 10450.0166
MET 10460.0129
ILE 10470.0159
GLY 10480.0355
GLY 10490.0424
ILE 10500.0478
GLY 10510.1642
GLY 10520.0871
PHE 10530.0260
ILE 10540.0198
LYS 10550.0143
VAL 10560.0091
ARG 10570.0058
GLN 10580.0087
TYR 10590.0061
ASP 10600.0069
GLN 10610.0028
ILE 10620.0072
LEU 10630.0075
ILE 10640.0101
ILE 10640.0100
GLU 10650.0087
ILE 10660.0085
CYS 10670.0093
GLY 10680.0141
HIS 10690.0124
LYS 10700.0129
ALA 10710.0083
ILE 10720.0035
GLY 10730.0036
THR 10740.0075
VAL 10750.0123
LEU 10760.0090
VAL 10770.0129
GLY 10780.0126
PRO 10790.0109
THR 10800.0174
PRO 10810.0790
VAL 10820.0150
ASN 10830.0077
ILE 10840.0087
ILE 10840.0087
ILE 10850.0075
GLY 10860.0066
ARG 10870.0069
ASN 10880.0056
LEU 10890.0037
LEU 10900.0063
THR 10910.0094
THR 10910.0093
THR 10910.0092
GLN 10920.0095
ILE 10930.0103
GLY 10940.0139
CYS 10950.0118
THR 10960.0130
LEU 10970.0106
ASN 10980.0108
PHE 10990.0138
PRO 10010.0115
GLN 10020.0089
ILE 10030.0101
THR 10040.0153
LEU 10050.0086
TRP 10060.0100
LYS 10070.0071
LYS 10070.0070
ARG 10080.0082
ARG 10080.0081
PRO 10090.0068
LEU 10100.0077
VAL 10110.0072
THR 10120.0064
ILE 10130.0075
LYS 10140.0112
ILE 10150.0198
GLY 10160.0278
GLY 10170.0670
GLN 10180.0284
LEU 10190.0125
LYS 10200.0033
GLU 10210.0021
GLU 10210.0021
ALA 10220.0042
LEU 10230.0059
LEU 10240.0041
ASP 10250.0062
THR 10260.0047
GLY 10270.0066
ALA 10280.0074
ASP 10290.0076
ASP 10300.0071
THR 10310.0086
VAL 10320.0123
VAL 10320.0121
LEU 10330.0118
GLU 10340.0118
GLU 10350.0160
MET 10360.0148
MET 10360.0148
ASN 10370.0180
LEU 10380.0128
PRO 10390.0099
GLY 10400.0179
ARG 10410.0115
TRP 10420.0167
LYS 10430.0158
PRO 10440.0123
LYS 10450.0166
MET 10460.0129
ILE 10470.0159
GLY 10480.0355
GLY 10490.0424
ILE 10500.0478
GLY 10510.1642
GLY 10520.0871
PHE 10530.0260
ILE 10540.0198
LYS 10550.0143
VAL 10560.0091
ARG 10570.0058
GLN 10580.0087
TYR 10590.0061
ASP 10600.0069
GLN 10610.0028
ILE 10620.0072
LEU 10630.0075
ILE 10640.0101
ILE 10640.0100
GLU 10650.0087
ILE 10660.0085
CYS 10670.0093
GLY 10680.0141
HIS 10690.0124
LYS 10700.0129
ALA 10710.0083
ILE 10720.0035
GLY 10730.0036
THR 10740.0075
VAL 10750.0123
LEU 10760.0090
VAL 10770.0129
GLY 10780.0126
PRO 10790.0109
THR 10800.0174
PRO 10810.0790
VAL 10820.0150
ASN 10830.0077
ILE 10840.0087
ILE 10840.0087
ILE 10850.0075
GLY 10860.0066
ARG 10870.0069
ASN 10880.0056
LEU 10890.0037
LEU 10900.0063
THR 10910.0094
THR 10910.0093
THR 10910.0092
GLN 10920.0095
ILE 10930.0103
GLY 10940.0139
CYS 10950.0118
THR 10960.0130
LEU 10970.0106
ASN 10980.0108
PHE 10990.0138

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.