CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1108
PRO 10010.0096
GLN 10020.0074
ILE 10030.0150
THR 10040.0222
LEU 10050.0155
TRP 10060.0212
LYS 10070.0153
LYS 10070.0154
ARG 10080.0197
ARG 10080.0196
PRO 10090.0225
LEU 10100.0241
VAL 10110.0241
THR 10120.0222
ILE 10130.0166
LYS 10140.0110
ILE 10150.0069
GLY 10160.0151
GLY 10170.0427
GLN 10180.0189
LEU 10190.0158
LYS 10200.0188
GLU 10210.0179
GLU 10210.0180
ALA 10220.0143
LEU 10230.0176
LEU 10240.0159
ASP 10250.0200
THR 10260.0178
GLY 10270.0250
ALA 10280.0174
ASP 10290.0192
ASP 10300.0144
THR 10310.0070
VAL 10320.0095
VAL 10320.0094
LEU 10330.0058
GLU 10340.0056
GLU 10350.0179
MET 10360.0178
MET 10360.0177
ASN 10370.0268
LEU 10380.0163
PRO 10390.0195
GLY 10400.0071
ARG 10410.0078
TRP 10420.0120
LYS 10430.0153
PRO 10440.0015
LYS 10450.0105
MET 10460.0240
ILE 10470.0103
GLY 10480.0036
GLY 10490.0095
ILE 10500.0337
GLY 10510.1108
GLY 10520.0726
PHE 10530.0150
ILE 10540.0110
LYS 10550.0161
VAL 10560.0039
ARG 10570.0051
GLN 10580.0063
TYR 10590.0070
ASP 10600.0134
GLN 10610.0141
ILE 10620.0133
LEU 10630.0170
ILE 10640.0153
ILE 10640.0153
GLU 10650.0150
ILE 10660.0136
CYS 10670.0100
GLY 10680.0107
HIS 10690.0161
LYS 10700.0170
ALA 10710.0175
ILE 10720.0173
GLY 10730.0142
THR 10740.0129
VAL 10750.0069
LEU 10760.0024
VAL 10770.0066
GLY 10780.0104
PRO 10790.0133
THR 10800.0186
PRO 10810.1003
VAL 10820.0131
ASN 10830.0066
ILE 10840.0124
ILE 10840.0124
ILE 10850.0102
GLY 10860.0097
ARG 10870.0096
ASN 10880.0133
LEU 10890.0106
LEU 10900.0078
THR 10910.0166
THR 10910.0165
THR 10910.0162
GLN 10920.0191
ILE 10930.0147
GLY 10940.0163
CYS 10950.0108
THR 10960.0058
LEU 10970.0074
ASN 10980.0031
PHE 10990.0109
PRO 10010.0096
GLN 10020.0074
ILE 10030.0150
THR 10040.0222
LEU 10050.0155
TRP 10060.0212
LYS 10070.0153
LYS 10070.0154
ARG 10080.0197
ARG 10080.0196
PRO 10090.0225
LEU 10100.0241
VAL 10110.0241
THR 10120.0222
ILE 10130.0166
LYS 10140.0110
ILE 10150.0069
GLY 10160.0151
GLY 10170.0427
GLN 10180.0189
LEU 10190.0158
LYS 10200.0188
GLU 10210.0179
GLU 10210.0180
ALA 10220.0143
LEU 10230.0176
LEU 10240.0159
ASP 10250.0200
THR 10260.0178
GLY 10270.0250
ALA 10280.0174
ASP 10290.0192
ASP 10300.0144
THR 10310.0070
VAL 10320.0095
VAL 10320.0094
LEU 10330.0058
GLU 10340.0056
GLU 10350.0179
MET 10360.0178
MET 10360.0177
ASN 10370.0268
LEU 10380.0163
PRO 10390.0195
GLY 10400.0071
ARG 10410.0078
TRP 10420.0120
LYS 10430.0153
PRO 10440.0015
LYS 10450.0105
MET 10460.0240
ILE 10470.0103
GLY 10480.0036
GLY 10490.0095
ILE 10500.0337
GLY 10510.1108
GLY 10520.0726
PHE 10530.0150
ILE 10540.0110
LYS 10550.0161
VAL 10560.0039
ARG 10570.0051
GLN 10580.0063
TYR 10590.0070
ASP 10600.0134
GLN 10610.0141
ILE 10620.0133
LEU 10630.0170
ILE 10640.0153
ILE 10640.0153
GLU 10650.0150
ILE 10660.0136
CYS 10670.0100
GLY 10680.0107
HIS 10690.0161
LYS 10700.0170
ALA 10710.0175
ILE 10720.0173
GLY 10730.0142
THR 10740.0129
VAL 10750.0069
LEU 10760.0024
VAL 10770.0066
GLY 10780.0104
PRO 10790.0133
THR 10800.0186
PRO 10810.1003
VAL 10820.0131
ASN 10830.0066
ILE 10840.0124
ILE 10840.0124
ILE 10850.0102
GLY 10860.0097
ARG 10870.0096
ASN 10880.0133
LEU 10890.0106
LEU 10900.0078
THR 10910.0166
THR 10910.0165
THR 10910.0162
GLN 10920.0191
ILE 10930.0147
GLY 10940.0163
CYS 10950.0108
THR 10960.0058
LEU 10970.0074
ASN 10980.0031
PHE 10990.0109

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.