CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1201
PRO 10010.0355
GLN 10020.0348
ILE 10030.0186
THR 10040.0165
LEU 10050.0185
TRP 10060.0352
LYS 10070.0281
LYS 10070.0282
ARG 10080.0259
ARG 10080.0259
PRO 10090.0176
LEU 10100.0175
VAL 10110.0138
THR 10120.0156
ILE 10130.0118
LYS 10140.0079
ILE 10150.0054
GLY 10160.0167
GLY 10170.0569
GLN 10180.0256
LEU 10190.0154
LYS 10200.0118
GLU 10210.0118
GLU 10210.0117
ALA 10220.0040
LEU 10230.0090
LEU 10240.0077
ASP 10250.0060
THR 10260.0094
GLY 10270.0132
ALA 10280.0164
ASP 10290.0236
ASP 10300.0051
THR 10310.0068
VAL 10320.0088
VAL 10320.0086
LEU 10330.0048
GLU 10340.0121
GLU 10350.0094
MET 10360.0102
MET 10360.0102
ASN 10370.0096
LEU 10380.0101
PRO 10390.0134
GLY 10400.0207
ARG 10410.0181
TRP 10420.0196
LYS 10430.0161
PRO 10440.0112
LYS 10450.0050
MET 10460.0129
ILE 10470.0233
GLY 10480.0408
GLY 10490.0307
ILE 10500.0440
GLY 10510.0277
GLY 10520.0510
PHE 10530.0435
ILE 10540.0351
LYS 10550.0149
VAL 10560.0074
ARG 10570.0106
GLN 10580.0098
TYR 10590.0099
ASP 10600.0149
GLN 10610.0103
ILE 10620.0103
LEU 10630.0093
ILE 10640.0080
ILE 10640.0081
GLU 10650.0122
ILE 10660.0167
CYS 10670.0233
GLY 10680.0215
HIS 10690.0176
LYS 10700.0184
ALA 10710.0100
ILE 10720.0124
GLY 10730.0109
THR 10740.0079
VAL 10750.0054
LEU 10760.0062
VAL 10770.0069
GLY 10780.0075
PRO 10790.0111
THR 10800.0238
PRO 10810.1201
VAL 10820.0263
ASN 10830.0093
ILE 10840.0052
ILE 10840.0053
ILE 10850.0071
GLY 10860.0113
ARG 10870.0209
ASN 10880.0207
LEU 10890.0180
LEU 10900.0185
THR 10910.0222
THR 10910.0222
THR 10910.0228
GLN 10920.0197
ILE 10930.0188
GLY 10940.0171
CYS 10950.0168
THR 10960.0137
LEU 10970.0133
ASN 10980.0230
PHE 10990.0261
PRO 10010.0355
GLN 10020.0348
ILE 10030.0186
THR 10040.0165
LEU 10050.0185
TRP 10060.0352
LYS 10070.0281
LYS 10070.0282
ARG 10080.0259
ARG 10080.0259
PRO 10090.0176
LEU 10100.0175
VAL 10110.0138
THR 10120.0156
ILE 10130.0118
LYS 10140.0079
ILE 10150.0054
GLY 10160.0167
GLY 10170.0569
GLN 10180.0256
LEU 10190.0154
LYS 10200.0118
GLU 10210.0118
GLU 10210.0117
ALA 10220.0040
LEU 10230.0090
LEU 10240.0077
ASP 10250.0060
THR 10260.0094
GLY 10270.0132
ALA 10280.0164
ASP 10290.0236
ASP 10300.0051
THR 10310.0068
VAL 10320.0088
VAL 10320.0086
LEU 10330.0048
GLU 10340.0121
GLU 10350.0094
MET 10360.0102
MET 10360.0102
ASN 10370.0096
LEU 10380.0101
PRO 10390.0134
GLY 10400.0207
ARG 10410.0181
TRP 10420.0196
LYS 10430.0161
PRO 10440.0112
LYS 10450.0050
MET 10460.0129
ILE 10470.0233
GLY 10480.0408
GLY 10490.0307
ILE 10500.0440
GLY 10510.0277
GLY 10520.0510
PHE 10530.0435
ILE 10540.0351
LYS 10550.0149
VAL 10560.0074
ARG 10570.0106
GLN 10580.0098
TYR 10590.0099
ASP 10600.0149
GLN 10610.0103
ILE 10620.0103
LEU 10630.0093
ILE 10640.0080
ILE 10640.0081
GLU 10650.0122
ILE 10660.0167
CYS 10670.0233
GLY 10680.0215
HIS 10690.0176
LYS 10700.0184
ALA 10710.0100
ILE 10720.0124
GLY 10730.0109
THR 10740.0079
VAL 10750.0054
LEU 10760.0062
VAL 10770.0069
GLY 10780.0075
PRO 10790.0111
THR 10800.0238
PRO 10810.1201
VAL 10820.0263
ASN 10830.0093
ILE 10840.0052
ILE 10840.0053
ILE 10850.0071
GLY 10860.0113
ARG 10870.0209
ASN 10880.0207
LEU 10890.0180
LEU 10900.0185
THR 10910.0222
THR 10910.0222
THR 10910.0228
GLN 10920.0197
ILE 10930.0188
GLY 10940.0171
CYS 10950.0168
THR 10960.0137
LEU 10970.0133
ASN 10980.0230
PHE 10990.0261

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.