CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 62  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1121
PRO 10010.0523
GLN 10020.0443
ILE 10030.0344
THR 10040.0331
LEU 10050.0116
TRP 10060.0245
LYS 10070.0113
LYS 10070.0108
ARG 10080.0141
ARG 10080.0139
PRO 10090.0159
LEU 10100.0139
VAL 10110.0094
THR 10120.0179
ILE 10130.0186
LYS 10140.0266
ILE 10150.0101
GLY 10160.0165
GLY 10170.1121
GLN 10180.0379
LEU 10190.0243
LYS 10200.0193
GLU 10210.0159
GLU 10210.0158
ALA 10220.0135
LEU 10230.0139
LEU 10240.0118
ASP 10250.0117
THR 10260.0184
GLY 10270.0164
ALA 10280.0114
ASP 10290.0125
ASP 10300.0077
THR 10310.0066
VAL 10320.0043
VAL 10320.0042
LEU 10330.0050
GLU 10340.0114
GLU 10350.0150
MET 10360.0117
MET 10360.0116
ASN 10370.0233
LEU 10380.0164
PRO 10390.0178
GLY 10400.0387
ARG 10410.0209
TRP 10420.0146
LYS 10430.0141
PRO 10440.0221
LYS 10450.0274
MET 10460.0276
ILE 10470.0256
GLY 10480.0233
GLY 10490.0351
ILE 10500.0177
GLY 10510.0096
GLY 10520.0618
PHE 10530.0160
ILE 10540.0127
LYS 10550.0096
VAL 10560.0102
ARG 10570.0125
GLN 10580.0127
TYR 10590.0109
ASP 10600.0150
GLN 10610.0187
ILE 10620.0180
LEU 10630.0235
ILE 10640.0181
ILE 10640.0181
GLU 10650.0187
ILE 10660.0167
CYS 10670.0225
GLY 10680.0308
HIS 10690.0269
LYS 10700.0276
ALA 10710.0170
ILE 10720.0241
GLY 10730.0199
THR 10740.0066
VAL 10750.0062
LEU 10760.0066
VAL 10770.0082
GLY 10780.0102
PRO 10790.0206
THR 10800.0191
PRO 10810.0753
VAL 10820.0050
ASN 10830.0085
ILE 10840.0077
ILE 10840.0077
ILE 10850.0092
GLY 10860.0052
ARG 10870.0048
ASN 10880.0048
LEU 10890.0092
LEU 10900.0073
THR 10910.0075
THR 10910.0075
THR 10910.0070
GLN 10920.0075
ILE 10930.0133
GLY 10940.0101
CYS 10950.0110
THR 10960.0206
LEU 10970.0242
ASN 10980.0254
PHE 10990.0334
PRO 10010.0523
GLN 10020.0443
ILE 10030.0344
THR 10040.0331
LEU 10050.0116
TRP 10060.0245
LYS 10070.0113
LYS 10070.0108
ARG 10080.0141
ARG 10080.0139
PRO 10090.0159
LEU 10100.0139
VAL 10110.0094
THR 10120.0179
ILE 10130.0186
LYS 10140.0266
ILE 10150.0101
GLY 10160.0165
GLY 10170.1121
GLN 10180.0379
LEU 10190.0243
LYS 10200.0193
GLU 10210.0159
GLU 10210.0158
ALA 10220.0135
LEU 10230.0139
LEU 10240.0118
ASP 10250.0117
THR 10260.0184
GLY 10270.0164
ALA 10280.0114
ASP 10290.0125
ASP 10300.0077
THR 10310.0066
VAL 10320.0043
VAL 10320.0042
LEU 10330.0050
GLU 10340.0114
GLU 10350.0150
MET 10360.0117
MET 10360.0116
ASN 10370.0233
LEU 10380.0164
PRO 10390.0178
GLY 10400.0387
ARG 10410.0209
TRP 10420.0146
LYS 10430.0141
PRO 10440.0221
LYS 10450.0274
MET 10460.0276
ILE 10470.0256
GLY 10480.0233
GLY 10490.0351
ILE 10500.0177
GLY 10510.0096
GLY 10520.0618
PHE 10530.0160
ILE 10540.0127
LYS 10550.0096
VAL 10560.0102
ARG 10570.0125
GLN 10580.0127
TYR 10590.0109
ASP 10600.0150
GLN 10610.0187
ILE 10620.0180
LEU 10630.0235
ILE 10640.0181
ILE 10640.0181
GLU 10650.0187
ILE 10660.0167
CYS 10670.0225
GLY 10680.0308
HIS 10690.0269
LYS 10700.0276
ALA 10710.0170
ILE 10720.0241
GLY 10730.0199
THR 10740.0066
VAL 10750.0062
LEU 10760.0066
VAL 10770.0082
GLY 10780.0102
PRO 10790.0206
THR 10800.0191
PRO 10810.0753
VAL 10820.0050
ASN 10830.0085
ILE 10840.0077
ILE 10840.0077
ILE 10850.0092
GLY 10860.0052
ARG 10870.0048
ASN 10880.0048
LEU 10890.0092
LEU 10900.0073
THR 10910.0075
THR 10910.0075
THR 10910.0070
GLN 10920.0075
ILE 10930.0133
GLY 10940.0101
CYS 10950.0110
THR 10960.0206
LEU 10970.0242
ASN 10980.0254
PHE 10990.0334

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.