CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

CA strain for 2602061631263072433

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1001GLN 1002 -0.0614
GLN 1002ILE 1003 0.0426
ILE 1003THR 1004 -0.1189
THR 1004LEU 1005 -0.0435
LEU 1005TRP 1006 -0.0321
TRP 1006LYS 1007 0.0698
LYS 1007LYS 1007 0.0072
LYS 1007ARG 1008 0.0154
ARG 1008ARG 1008 0.0043
ARG 1008PRO 1009 0.0121
PRO 1009LEU 1010 0.0387
LEU 1010VAL 1011 -0.1169
VAL 1011THR 1012 -0.0558
THR 1012ILE 1013 -0.0271
ILE 1013LYS 1014 -0.0302
LYS 1014ILE 1015 0.0001
ILE 1015GLY 1016 -0.0151
GLY 1016GLY 1017 -0.0134
GLY 1017GLN 1018 -0.0115
GLN 1018LEU 1019 -0.0208
LEU 1019LYS 1020 -0.0007
LYS 1020GLU 1021 -0.0113
GLU 1021GLU 1021 0.0168
GLU 1021ALA 1022 -0.0231
ALA 1022LEU 1023 -0.0539
LEU 1023LEU 1024 0.0281
LEU 1024ASP 1025 -0.0322
ASP 1025THR 1026 -0.0487
THR 1026GLY 1027 0.0308
GLY 1027ALA 1028 0.0227
ALA 1028ASP 1029 0.0052
ASP 1029ASP 1030 -0.1285
ASP 1030THR 1031 -0.0084
THR 1031VAL 1032 -0.0790
VAL 1032VAL 1032 -0.0037
VAL 1032LEU 1033 -0.0552
LEU 1033GLU 1034 -0.0057
GLU 1034GLU 1035 -0.0082
GLU 1035MET 1036 0.0235
MET 1036MET 1036 -0.0064
MET 1036ASN 1037 -0.0075
ASN 1037LEU 1038 0.0034
LEU 1038PRO 1039 0.0003
PRO 1039GLY 1040 -0.0337
GLY 1040ARG 1041 -0.0039
ARG 1041TRP 1042 0.0051
TRP 1042LYS 1043 -0.0016
LYS 1043PRO 1044 -0.0107
PRO 1044LYS 1045 0.0097
LYS 1045MET 1046 -0.0528
MET 1046ILE 1047 0.0035
ILE 1047GLY 1048 0.0753
GLY 1048GLY 1049 -0.0475
GLY 1049ILE 1050 0.1751
ILE 1050GLY 1051 -0.0474
GLY 1051GLY 1052 -0.0219
GLY 1052PHE 1053 -0.0570
PHE 1053ILE 1054 0.0963
ILE 1054LYS 1055 -0.0063
LYS 1055VAL 1056 -0.0098
VAL 1056ARG 1057 0.0038
ARG 1057GLN 1058 -0.0100
GLN 1058TYR 1059 -0.0391
TYR 1059ASP 1060 0.0044
ASP 1060GLN 1061 -0.0675
GLN 1061ILE 1062 0.0007
ILE 1062LEU 1063 -0.0522
LEU 1063ILE 1064 -0.0113
ILE 1064ILE 1064 0.0065
ILE 1064GLU 1065 -0.0203
GLU 1065ILE 1066 -0.0018
ILE 1066CYS 1067 -0.0101
CYS 1067GLY 1068 -0.0483
GLY 1068HIS 1069 0.0747
HIS 1069LYS 1070 -0.1206
LYS 1070ALA 1071 0.0030
ALA 1071ILE 1072 -0.0980
ILE 1072GLY 1073 -0.0203
GLY 1073THR 1074 -0.0840
THR 1074VAL 1075 -0.0100
VAL 1075LEU 1076 -0.0352
LEU 1076VAL 1077 -0.0619
VAL 1077GLY 1078 0.0115
GLY 1078PRO 1079 0.0114
PRO 1079THR 1080 -0.0165
THR 1080PRO 1081 0.0346
PRO 1081VAL 1082 0.1046
VAL 1082ASN 1083 -0.0169
ASN 1083ILE 1084 -0.0691
ILE 1084ILE 1084 0.0248
ILE 1084ILE 1085 -0.0101
ILE 1085GLY 1086 -0.0441
GLY 1086ARG 1087 -0.0787
ARG 1087ASN 1088 0.0701
ASN 1088LEU 1089 0.0169
LEU 1089LEU 1090 -0.0316
LEU 1090THR 1091 0.0237
THR 1091THR 1091 -0.0033
THR 1091THR 1091 0.0027
THR 1091GLN 1092 0.0379
GLN 1092ILE 1093 -0.0532
ILE 1093GLY 1094 0.0346
GLY 1094CYS 1095 0.0123
CYS 1095THR 1096 -0.0386
THR 1096LEU 1097 -0.0242
LEU 1097ASN 1098 0.0105
ASN 1098PHE 1099 -0.0370
PHE 1099PRO 1001 -0.0046
PRO 1001GLN 1002 -0.0614
GLN 1002ILE 1003 0.0426
ILE 1003THR 1004 -0.1189
THR 1004LEU 1005 -0.0435
LEU 1005TRP 1006 -0.0321
TRP 1006LYS 1007 0.0698
LYS 1007LYS 1007 0.0072
LYS 1007ARG 1008 0.0154
ARG 1008ARG 1008 0.0043
ARG 1008PRO 1009 0.0121
PRO 1009LEU 1010 0.0387
LEU 1010VAL 1011 -0.1169
VAL 1011THR 1012 -0.0558
THR 1012ILE 1013 -0.0271
ILE 1013LYS 1014 -0.0302
LYS 1014ILE 1015 0.0001
ILE 1015GLY 1016 -0.0151
GLY 1016GLY 1017 -0.0134
GLY 1017GLN 1018 -0.0115
GLN 1018LEU 1019 -0.0208
LEU 1019LYS 1020 -0.0007
LYS 1020GLU 1021 -0.0113
GLU 1021GLU 1021 0.0168
GLU 1021ALA 1022 -0.0231
ALA 1022LEU 1023 -0.0539
LEU 1023LEU 1024 0.0281
LEU 1024ASP 1025 -0.0322
ASP 1025THR 1026 -0.0487
THR 1026GLY 1027 0.0308
GLY 1027ALA 1028 0.0227
ALA 1028ASP 1029 0.0052
ASP 1029ASP 1030 -0.1285
ASP 1030THR 1031 -0.0084
THR 1031VAL 1032 -0.0790
VAL 1032VAL 1032 -0.0037
VAL 1032LEU 1033 -0.0552
LEU 1033GLU 1034 -0.0057
GLU 1034GLU 1035 -0.0082
GLU 1035MET 1036 0.0235
MET 1036MET 1036 -0.0064
MET 1036ASN 1037 -0.0075
ASN 1037LEU 1038 0.0034
LEU 1038PRO 1039 0.0003
PRO 1039GLY 1040 -0.0337
GLY 1040ARG 1041 -0.0039
ARG 1041TRP 1042 0.0051
TRP 1042LYS 1043 -0.0016
LYS 1043PRO 1044 -0.0107
PRO 1044LYS 1045 0.0097
LYS 1045MET 1046 -0.0528
MET 1046ILE 1047 0.0035
ILE 1047GLY 1048 0.0753
GLY 1048GLY 1049 -0.0475
GLY 1049ILE 1050 0.1751
ILE 1050GLY 1051 -0.0474
GLY 1051GLY 1052 -0.0219
GLY 1052PHE 1053 -0.0570
PHE 1053ILE 1054 0.0963
ILE 1054LYS 1055 -0.0063
LYS 1055VAL 1056 -0.0098
VAL 1056ARG 1057 0.0038
ARG 1057GLN 1058 -0.0100
GLN 1058TYR 1059 -0.0391
TYR 1059ASP 1060 0.0044
ASP 1060GLN 1061 -0.0675
GLN 1061ILE 1062 0.0007
ILE 1062LEU 1063 -0.0522
LEU 1063ILE 1064 -0.0113
ILE 1064ILE 1064 0.0065
ILE 1064GLU 1065 -0.0203
GLU 1065ILE 1066 -0.0018
ILE 1066CYS 1067 -0.0101
CYS 1067GLY 1068 -0.0483
GLY 1068HIS 1069 0.0747
HIS 1069LYS 1070 -0.1206
LYS 1070ALA 1071 0.0030
ALA 1071ILE 1072 -0.0980
ILE 1072GLY 1073 -0.0203
GLY 1073THR 1074 -0.0840
THR 1074VAL 1075 -0.0100
VAL 1075LEU 1076 -0.0352
LEU 1076VAL 1077 -0.0619
VAL 1077GLY 1078 0.0115
GLY 1078PRO 1079 0.0114
PRO 1079THR 1080 -0.0165
THR 1080PRO 1081 0.0346
PRO 1081VAL 1082 0.1046
VAL 1082ASN 1083 -0.0169
ASN 1083ILE 1084 -0.0691
ILE 1084ILE 1084 0.0248
ILE 1084ILE 1085 -0.0101
ILE 1085GLY 1086 -0.0441
GLY 1086ARG 1087 -0.0787
ARG 1087ASN 1088 0.0701
ASN 1088LEU 1089 0.0169
LEU 1089LEU 1090 -0.0316
LEU 1090THR 1091 0.0237
THR 1091THR 1091 -0.0033
THR 1091THR 1091 0.0027
THR 1091GLN 1092 0.0379
GLN 1092ILE 1093 -0.0532
ILE 1093GLY 1094 0.0346
GLY 1094CYS 1095 0.0123
CYS 1095THR 1096 -0.0386
THR 1096LEU 1097 -0.0242
LEU 1097ASN 1098 0.0105
ASN 1098PHE 1099 -0.0370

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.