CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0838
PRO 10010.0125
GLN 10020.0071
ILE 10030.0077
THR 10040.0052
LEU 10050.0048
TRP 10060.0056
LYS 10070.0068
LYS 10070.0068
ARG 10080.0083
ARG 10080.0083
PRO 10090.0086
LEU 10100.0139
VAL 10110.0176
THR 10120.0210
ILE 10130.0169
LYS 10140.0182
ILE 10150.0122
GLY 10160.0109
GLY 10170.0190
GLN 10180.0206
LEU 10190.0231
LYS 10200.0211
GLU 10210.0205
GLU 10210.0205
ALA 10220.0147
LEU 10230.0115
LEU 10240.0078
ASP 10250.0059
THR 10260.0052
GLY 10270.0065
ALA 10280.0051
ASP 10290.0060
ASP 10300.0106
THR 10310.0062
VAL 10320.0117
VAL 10320.0118
LEU 10330.0135
GLU 10340.0213
GLU 10350.0227
MET 10360.0146
MET 10360.0145
ASN 10370.0074
LEU 10380.0050
PRO 10390.0144
GLY 10400.0249
ARG 10410.0328
TRP 10420.0316
LYS 10430.0409
PRO 10440.0442
LYS 10450.0449
MET 10460.0526
ILE 10470.0439
GLY 10480.0446
GLY 10490.0582
ILE 10500.0462
GLY 10510.0838
GLY 10520.0799
PHE 10530.0652
ILE 10540.0527
LYS 10550.0482
VAL 10560.0346
ARG 10570.0291
GLN 10580.0272
TYR 10590.0208
ASP 10600.0253
GLN 10610.0245
ILE 10620.0157
LEU 10630.0170
ILE 10640.0135
ILE 10640.0136
GLU 10650.0184
ILE 10660.0150
CYS 10670.0195
GLY 10680.0248
HIS 10690.0204
LYS 10700.0211
ALA 10710.0175
ILE 10720.0195
GLY 10730.0173
THR 10740.0173
VAL 10750.0104
LEU 10760.0164
VAL 10770.0180
GLY 10780.0277
PRO 10790.0370
THR 10800.0286
PRO 10810.0311
VAL 10820.0211
ASN 10830.0158
ILE 10840.0093
ILE 10840.0093
ILE 10850.0047
GLY 10860.0026
ARG 10870.0036
ASN 10880.0073
LEU 10890.0069
LEU 10900.0053
THR 10910.0062
THR 10910.0062
THR 10910.0062
GLN 10920.0109
ILE 10930.0115
GLY 10940.0090
CYS 10950.0064
THR 10960.0046
LEU 10970.0055
ASN 10980.0058
PHE 10990.0102
PRO 10010.0125
GLN 10020.0071
ILE 10030.0077
THR 10040.0052
LEU 10050.0048
TRP 10060.0056
LYS 10070.0068
LYS 10070.0068
ARG 10080.0083
ARG 10080.0083
PRO 10090.0086
LEU 10100.0139
VAL 10110.0176
THR 10120.0210
ILE 10130.0169
LYS 10140.0182
ILE 10150.0122
GLY 10160.0109
GLY 10170.0190
GLN 10180.0206
LEU 10190.0231
LYS 10200.0211
GLU 10210.0205
GLU 10210.0205
ALA 10220.0147
LEU 10230.0115
LEU 10240.0078
ASP 10250.0059
THR 10260.0052
GLY 10270.0065
ALA 10280.0051
ASP 10290.0060
ASP 10300.0106
THR 10310.0062
VAL 10320.0117
VAL 10320.0118
LEU 10330.0135
GLU 10340.0213
GLU 10350.0227
MET 10360.0146
MET 10360.0145
ASN 10370.0074
LEU 10380.0050
PRO 10390.0144
GLY 10400.0249
ARG 10410.0328
TRP 10420.0316
LYS 10430.0409
PRO 10440.0442
LYS 10450.0449
MET 10460.0526
ILE 10470.0439
GLY 10480.0446
GLY 10490.0582
ILE 10500.0462
GLY 10510.0838
GLY 10520.0799
PHE 10530.0652
ILE 10540.0527
LYS 10550.0482
VAL 10560.0346
ARG 10570.0291
GLN 10580.0272
TYR 10590.0208
ASP 10600.0253
GLN 10610.0245
ILE 10620.0157
LEU 10630.0170
ILE 10640.0135
ILE 10640.0136
GLU 10650.0184
ILE 10660.0150
CYS 10670.0195
GLY 10680.0248
HIS 10690.0204
LYS 10700.0211
ALA 10710.0175
ILE 10720.0195
GLY 10730.0173
THR 10740.0173
VAL 10750.0104
LEU 10760.0164
VAL 10770.0180
GLY 10780.0277
PRO 10790.0370
THR 10800.0286
PRO 10810.0311
VAL 10820.0211
ASN 10830.0158
ILE 10840.0093
ILE 10840.0093
ILE 10850.0047
GLY 10860.0026
ARG 10870.0036
ASN 10880.0073
LEU 10890.0069
LEU 10900.0053
THR 10910.0062
THR 10910.0062
THR 10910.0062
GLN 10920.0109
ILE 10930.0115
GLY 10940.0090
CYS 10950.0064
THR 10960.0046
LEU 10970.0055
ASN 10980.0058
PHE 10990.0102

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.