CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

CA distance fluctuations for 2602061631263072433

---  normal mode 7  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
VAL 1011 0.14 PRO 1001 -0.14 GLY 1049
VAL 1011 0.15 GLN 1002 -0.13 GLY 1049
GLY 1051 0.19 ILE 1003 -0.17 GLY 1049
GLY 1051 0.23 THR 1004 -0.19 GLY 1049
GLY 1051 0.28 LEU 1005 -0.21 GLY 1049
GLY 1051 0.34 TRP 1006 -0.28 GLY 1049
GLY 1051 0.36 LYS 1007 -0.35 GLY 1049
GLY 1051 0.36 LYS 1007 -0.35 GLY 1049
GLY 1051 0.36 ARG 1008 -0.33 GLY 1049
GLY 1051 0.36 ARG 1008 -0.33 GLY 1049
GLY 1051 0.27 PRO 1009 -0.23 GLY 1049
GLY 1051 0.25 LEU 1010 -0.28 GLY 1049
GLY 1051 0.18 VAL 1011 -0.24 GLY 1049
GLY 1051 0.15 THR 1012 -0.22 GLY 1049
GLY 1051 0.13 ILE 1013 -0.12 GLY 1049
GLY 1051 0.10 LYS 1014 -0.09 GLY 1049
GLY 1051 0.08 ILE 1015 -0.05 GLY 1040
GLY 1051 0.10 GLY 1016 -0.05 PRO 1039
GLY 1051 0.07 GLY 1017 -0.06 PRO 1039
GLY 1051 0.09 GLN 1018 -0.10 GLY 1049
GLY 1051 0.12 LEU 1019 -0.17 GLY 1049
GLY 1051 0.14 LYS 1020 -0.18 GLY 1049
GLY 1051 0.19 GLU 1021 -0.25 GLY 1049
GLY 1051 0.18 GLU 1021 -0.25 GLY 1049
GLY 1051 0.19 ALA 1022 -0.16 GLY 1049
GLY 1051 0.23 LEU 1023 -0.14 GLY 1049
GLY 1051 0.18 LEU 1024 -0.07 GLY 1049
GLY 1051 0.19 ASP 1025 -0.07 GLY 1027
GLY 1051 0.25 THR 1026 -0.07 PRO 1079
GLY 1051 0.32 GLY 1027 -0.14 THR 1080
GLY 1051 0.45 ALA 1028 -0.16 THR 1080
GLY 1051 0.53 ASP 1029 -0.26 GLY 1048
GLY 1051 0.57 ASP 1030 -0.18 TRP 1006
GLY 1051 0.42 THR 1031 -0.10 TRP 1006
GLY 1051 0.41 VAL 1032 -0.15 ASP 1029
GLY 1051 0.41 VAL 1032 -0.16 ASP 1029
GLY 1051 0.21 LEU 1033 -0.12 ASP 1029
GLY 1051 0.14 GLU 1034 -0.15 PRO 1081
ILE 1050 0.15 GLU 1035 -0.12 PRO 1081
ILE 1050 0.11 MET 1036 -0.08 PRO 1081
ILE 1050 0.11 MET 1036 -0.08 PRO 1081
GLY 1051 0.16 ASN 1037 -0.05 LYS 1007
GLY 1051 0.25 LEU 1038 -0.03 CYS 1067
GLY 1051 0.29 PRO 1039 -0.06 GLY 1017
GLY 1051 0.38 GLY 1040 -0.06 ILE 1093
GLY 1051 0.48 ARG 1041 -0.08 ILE 1093
GLY 1051 0.56 TRP 1042 -0.09 TRP 1006
GLY 1051 0.69 LYS 1043 -0.13 TRP 1006
GLY 1051 0.81 PRO 1044 -0.16 TRP 1006
GLY 1051 0.98 LYS 1045 -0.21 TRP 1006
GLY 1051 1.24 MET 1046 -0.25 LYS 1007
GLY 1051 1.28 ILE 1047 -0.29 LYS 1007
GLY 1051 1.38 GLY 1048 -0.31 LYS 1007
GLY 1051 1.83 GLY 1049 -0.35 LYS 1007
GLY 1052 1.42 ILE 1050 -0.23 LYS 1007
GLY 1049 1.83 GLY 1051 -0.18 GLU 1021
GLY 1049 1.54 GLY 1052 -0.24 LYS 1007
GLY 1051 1.41 PHE 1053 -0.26 LYS 1007
ILE 1050 1.14 ILE 1054 -0.23 LYS 1007
GLY 1051 0.93 LYS 1055 -0.20 LYS 1007
GLY 1051 0.73 VAL 1056 -0.16 LYS 1007
GLY 1051 0.63 ARG 1057 -0.13 TRP 1006
GLY 1051 0.65 GLN 1058 -0.13 TRP 1006
GLY 1051 0.50 TYR 1059 -0.09 GLN 1092
GLY 1051 0.49 ASP 1060 -0.11 ILE 1093
GLY 1051 0.40 GLN 1061 -0.10 ILE 1093
GLY 1051 0.31 ILE 1062 -0.06 ILE 1093
GLY 1051 0.22 LEU 1063 -0.06 ARG 1041
GLY 1051 0.16 ILE 1064 -0.05 ASP 1060
GLY 1051 0.16 ILE 1064 -0.05 ASP 1060
GLY 1051 0.08 GLU 1065 -0.07 PRO 1009
GLY 1051 0.10 ILE 1066 -0.09 PRO 1009
GLY 1051 0.12 CYS 1067 -0.15 GLY 1049
GLY 1051 0.09 GLY 1068 -0.13 GLY 1049
GLY 1094 0.09 HIS 1069 -0.12 LYS 1070
GLY 1051 0.13 LYS 1070 -0.12 HIS 1069
GLY 1051 0.21 ALA 1071 -0.11 PHE 1099
GLY 1051 0.29 ILE 1072 -0.11 ILE 1093
GLY 1051 0.38 GLY 1073 -0.13 ILE 1093
GLY 1051 0.48 THR 1074 -0.13 GLN 1092
GLY 1051 0.43 VAL 1075 -0.08 TRP 1006
GLY 1051 0.54 LEU 1076 -0.12 TRP 1006
GLY 1051 0.41 VAL 1077 -0.11 LYS 1007
ILE 1050 0.44 GLY 1078 -0.15 ASP 1029
ILE 1050 0.38 PRO 1079 -0.23 PRO 1081
ILE 1050 0.35 THR 1080 -0.25 PRO 1081
GLY 1051 0.31 PRO 1081 -0.33 PRO 1081
GLY 1051 0.30 VAL 1082 -0.26 PRO 1081
GLY 1051 0.21 ASN 1083 -0.16 PRO 1081
GLY 1051 0.19 ILE 1084 -0.10 ASP 1029
GLY 1051 0.19 ILE 1084 -0.10 ASP 1029
GLY 1051 0.22 ILE 1085 -0.05 ASP 1029
GLY 1051 0.35 GLY 1086 -0.08 PRO 1079
GLY 1051 0.35 ARG 1087 -0.15 GLY 1049
GLY 1051 0.40 ASN 1088 -0.18 ILE 1047
GLY 1051 0.30 LEU 1089 -0.10 MET 1046
GLY 1051 0.24 LEU 1090 -0.10 GLY 1049
GLY 1051 0.27 THR 1091 -0.15 GLY 1049
GLY 1051 0.27 THR 1091 -0.15 GLY 1049
GLY 1051 0.28 THR 1091 -0.15 GLY 1049
GLY 1051 0.26 GLN 1092 -0.13 MET 1046
GLY 1051 0.18 ILE 1093 -0.13 GLY 1073
GLY 1051 0.19 GLY 1094 -0.11 GLN 1092
GLY 1051 0.16 CYS 1095 -0.09 GLY 1049
GLY 1051 0.16 THR 1096 -0.11 GLY 1049
GLY 1051 0.14 LEU 1097 -0.09 GLY 1049
VAL 1011 0.12 ASN 1098 -0.08 GLN 1092
GLY 1051 0.09 PHE 1099 -0.11 ALA 1071
VAL 1011 0.14 PRO 1001 -0.14 GLY 1049
VAL 1011 0.15 GLN 1002 -0.13 GLY 1049
GLY 1051 0.19 ILE 1003 -0.17 GLY 1049
GLY 1051 0.23 THR 1004 -0.19 GLY 1049
GLY 1051 0.28 LEU 1005 -0.21 GLY 1049
GLY 1051 0.34 TRP 1006 -0.28 GLY 1049
GLY 1051 0.36 LYS 1007 -0.35 GLY 1049
GLY 1051 0.36 LYS 1007 -0.35 GLY 1049
GLY 1051 0.36 ARG 1008 -0.33 GLY 1049
GLY 1051 0.36 ARG 1008 -0.33 GLY 1049
GLY 1051 0.27 PRO 1009 -0.23 GLY 1049
GLY 1051 0.25 LEU 1010 -0.28 GLY 1049
GLY 1051 0.18 VAL 1011 -0.24 GLY 1049
GLY 1051 0.15 THR 1012 -0.22 GLY 1049
GLY 1051 0.13 ILE 1013 -0.12 GLY 1049
GLY 1051 0.10 LYS 1014 -0.09 GLY 1049
GLY 1051 0.08 ILE 1015 -0.05 GLY 1040
GLY 1051 0.10 GLY 1016 -0.05 PRO 1039
GLY 1051 0.07 GLY 1017 -0.06 PRO 1039
GLY 1051 0.09 GLN 1018 -0.10 GLY 1049
GLY 1051 0.12 LEU 1019 -0.17 GLY 1049
GLY 1051 0.14 LYS 1020 -0.18 GLY 1049
GLY 1051 0.19 GLU 1021 -0.25 GLY 1049
GLY 1051 0.18 GLU 1021 -0.25 GLY 1049
GLY 1051 0.19 ALA 1022 -0.16 GLY 1049
GLY 1051 0.23 LEU 1023 -0.14 GLY 1049
GLY 1051 0.18 LEU 1024 -0.07 GLY 1049
GLY 1051 0.19 ASP 1025 -0.07 GLY 1027
GLY 1051 0.25 THR 1026 -0.07 PRO 1079
GLY 1051 0.32 GLY 1027 -0.14 THR 1080
GLY 1051 0.45 ALA 1028 -0.16 THR 1080
GLY 1051 0.53 ASP 1029 -0.26 GLY 1048
GLY 1051 0.57 ASP 1030 -0.18 TRP 1006
GLY 1051 0.42 THR 1031 -0.10 TRP 1006
GLY 1051 0.41 VAL 1032 -0.15 ASP 1029
GLY 1051 0.41 VAL 1032 -0.16 ASP 1029
GLY 1051 0.21 LEU 1033 -0.12 ASP 1029
GLY 1051 0.14 GLU 1034 -0.15 PRO 1081
ILE 1050 0.15 GLU 1035 -0.12 PRO 1081
ILE 1050 0.11 MET 1036 -0.08 PRO 1081
ILE 1050 0.11 MET 1036 -0.08 PRO 1081
GLY 1051 0.16 ASN 1037 -0.05 LYS 1007
GLY 1051 0.25 LEU 1038 -0.03 CYS 1067
GLY 1051 0.29 PRO 1039 -0.06 GLY 1017
GLY 1051 0.38 GLY 1040 -0.06 ILE 1093
GLY 1051 0.48 ARG 1041 -0.08 ILE 1093
GLY 1051 0.56 TRP 1042 -0.09 TRP 1006
GLY 1051 0.69 LYS 1043 -0.13 TRP 1006
GLY 1051 0.81 PRO 1044 -0.16 TRP 1006
GLY 1051 0.98 LYS 1045 -0.21 TRP 1006
GLY 1051 1.24 MET 1046 -0.25 LYS 1007
GLY 1051 1.28 ILE 1047 -0.29 LYS 1007
GLY 1051 1.38 GLY 1048 -0.31 LYS 1007
GLY 1051 1.83 GLY 1049 -0.35 LYS 1007
GLY 1052 1.42 ILE 1050 -0.23 LYS 1007
GLY 1049 1.83 GLY 1051 -0.18 GLU 1021
GLY 1049 1.54 GLY 1052 -0.24 LYS 1007
GLY 1051 1.41 PHE 1053 -0.26 LYS 1007
ILE 1050 1.14 ILE 1054 -0.23 LYS 1007
GLY 1051 0.93 LYS 1055 -0.20 LYS 1007
GLY 1051 0.73 VAL 1056 -0.16 LYS 1007
GLY 1051 0.63 ARG 1057 -0.13 TRP 1006
GLY 1051 0.65 GLN 1058 -0.13 TRP 1006
GLY 1051 0.50 TYR 1059 -0.09 GLN 1092
GLY 1051 0.49 ASP 1060 -0.11 ILE 1093
GLY 1051 0.40 GLN 1061 -0.10 ILE 1093
GLY 1051 0.31 ILE 1062 -0.06 ILE 1093
GLY 1051 0.22 LEU 1063 -0.06 ARG 1041
GLY 1051 0.16 ILE 1064 -0.05 ASP 1060
GLY 1051 0.16 ILE 1064 -0.05 ASP 1060
GLY 1051 0.08 GLU 1065 -0.07 PRO 1009
GLY 1051 0.10 ILE 1066 -0.09 PRO 1009
GLY 1051 0.12 CYS 1067 -0.15 GLY 1049
GLY 1051 0.09 GLY 1068 -0.13 GLY 1049
GLY 1094 0.09 HIS 1069 -0.12 LYS 1070
GLY 1051 0.13 LYS 1070 -0.12 HIS 1069
GLY 1051 0.21 ALA 1071 -0.11 PHE 1099
GLY 1051 0.29 ILE 1072 -0.11 ILE 1093
GLY 1051 0.38 GLY 1073 -0.13 ILE 1093
GLY 1051 0.48 THR 1074 -0.13 GLN 1092
GLY 1051 0.43 VAL 1075 -0.08 TRP 1006
GLY 1051 0.54 LEU 1076 -0.12 TRP 1006
GLY 1051 0.41 VAL 1077 -0.11 LYS 1007
ILE 1050 0.44 GLY 1078 -0.15 ASP 1029
ILE 1050 0.38 PRO 1079 -0.23 PRO 1081
ILE 1050 0.35 THR 1080 -0.25 PRO 1081
GLY 1051 0.31 PRO 1081 -0.33 PRO 1081
GLY 1051 0.30 VAL 1082 -0.26 PRO 1081
GLY 1051 0.21 ASN 1083 -0.16 PRO 1081
GLY 1051 0.19 ILE 1084 -0.10 ASP 1029
GLY 1051 0.19 ILE 1084 -0.10 ASP 1029
GLY 1051 0.22 ILE 1085 -0.05 ASP 1029
GLY 1051 0.35 GLY 1086 -0.08 PRO 1079
GLY 1051 0.35 ARG 1087 -0.15 GLY 1049
GLY 1051 0.40 ASN 1088 -0.18 ILE 1047
GLY 1051 0.30 LEU 1089 -0.10 MET 1046
GLY 1051 0.24 LEU 1090 -0.10 GLY 1049
GLY 1051 0.27 THR 1091 -0.15 GLY 1049
GLY 1051 0.27 THR 1091 -0.15 GLY 1049
GLY 1051 0.28 THR 1091 -0.15 GLY 1049
GLY 1051 0.26 GLN 1092 -0.13 MET 1046
GLY 1051 0.18 ILE 1093 -0.13 GLY 1073
GLY 1051 0.19 GLY 1094 -0.11 GLN 1092
GLY 1051 0.16 CYS 1095 -0.09 GLY 1049
GLY 1051 0.16 THR 1096 -0.11 GLY 1049
GLY 1051 0.14 LEU 1097 -0.09 GLY 1049
VAL 1011 0.12 ASN 1098 -0.08 GLN 1092
GLY 1051 0.09 PHE 1099 -0.11 ALA 1071

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.