CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 76  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0585
PRO 10010.0299
GLN 10020.0110
ILE 10030.0052
THR 10040.0220
LEU 10050.0153
TRP 10060.0312
LYS 10070.0264
LYS 10070.0268
ARG 10080.0138
ARG 10080.0138
PRO 10090.0094
LEU 10100.0109
VAL 10110.0059
THR 10120.0084
ILE 10130.0064
LYS 10140.0033
ILE 10150.0055
GLY 10160.0123
GLY 10170.0050
GLN 10180.0045
LEU 10190.0139
LYS 10200.0087
GLU 10210.0098
GLU 10210.0096
ALA 10220.0096
LEU 10230.0071
LEU 10240.0088
ASP 10250.0065
THR 10260.0064
GLY 10270.0055
ALA 10280.0084
ASP 10290.0106
ASP 10300.0056
THR 10310.0044
VAL 10320.0039
VAL 10320.0039
LEU 10330.0078
GLU 10340.0158
GLU 10350.0213
MET 10360.0162
MET 10360.0162
ASN 10370.0310
LEU 10380.0182
PRO 10390.0182
GLY 10400.0564
ARG 10410.0251
TRP 10420.0095
LYS 10430.0248
PRO 10440.0262
LYS 10450.0109
MET 10460.0301
ILE 10470.0205
GLY 10480.0214
GLY 10490.0369
ILE 10500.0333
GLY 10510.0335
GLY 10520.0585
PHE 10530.0204
ILE 10540.0127
LYS 10550.0169
VAL 10560.0112
ARG 10570.0142
GLN 10580.0148
TYR 10590.0216
ASP 10600.0323
GLN 10610.0236
ILE 10620.0095
LEU 10630.0199
ILE 10640.0110
ILE 10640.0109
GLU 10650.0116
ILE 10660.0208
CYS 10670.0322
GLY 10680.0468
HIS 10690.0320
LYS 10700.0126
ALA 10710.0150
ILE 10720.0200
GLY 10730.0167
THR 10740.0190
VAL 10750.0146
LEU 10760.0086
VAL 10770.0138
GLY 10780.0130
PRO 10790.0124
THR 10800.0092
PRO 10810.0379
VAL 10820.0070
ASN 10830.0099
ILE 10840.0047
ILE 10840.0047
ILE 10850.0086
GLY 10860.0094
ARG 10870.0139
ASN 10880.0166
LEU 10890.0208
LEU 10900.0204
THR 10910.0197
THR 10910.0197
THR 10910.0193
GLN 10920.0221
ILE 10930.0227
GLY 10940.0200
CYS 10950.0243
THR 10960.0172
LEU 10970.0128
ASN 10980.0168
PHE 10990.0332
PRO 10010.0299
GLN 10020.0110
ILE 10030.0052
THR 10040.0220
LEU 10050.0153
TRP 10060.0312
LYS 10070.0264
LYS 10070.0268
ARG 10080.0138
ARG 10080.0138
PRO 10090.0094
LEU 10100.0109
VAL 10110.0059
THR 10120.0084
ILE 10130.0064
LYS 10140.0033
ILE 10150.0055
GLY 10160.0123
GLY 10170.0050
GLN 10180.0045
LEU 10190.0139
LYS 10200.0087
GLU 10210.0098
GLU 10210.0096
ALA 10220.0096
LEU 10230.0071
LEU 10240.0088
ASP 10250.0065
THR 10260.0064
GLY 10270.0055
ALA 10280.0084
ASP 10290.0106
ASP 10300.0056
THR 10310.0044
VAL 10320.0039
VAL 10320.0039
LEU 10330.0078
GLU 10340.0158
GLU 10350.0213
MET 10360.0162
MET 10360.0162
ASN 10370.0310
LEU 10380.0182
PRO 10390.0182
GLY 10400.0564
ARG 10410.0251
TRP 10420.0095
LYS 10430.0248
PRO 10440.0262
LYS 10450.0109
MET 10460.0301
ILE 10470.0205
GLY 10480.0214
GLY 10490.0369
ILE 10500.0333
GLY 10510.0335
GLY 10520.0585
PHE 10530.0204
ILE 10540.0127
LYS 10550.0169
VAL 10560.0112
ARG 10570.0142
GLN 10580.0148
TYR 10590.0216
ASP 10600.0323
GLN 10610.0236
ILE 10620.0095
LEU 10630.0199
ILE 10640.0110
ILE 10640.0109
GLU 10650.0116
ILE 10660.0208
CYS 10670.0322
GLY 10680.0468
HIS 10690.0320
LYS 10700.0126
ALA 10710.0150
ILE 10720.0200
GLY 10730.0167
THR 10740.0190
VAL 10750.0146
LEU 10760.0086
VAL 10770.0138
GLY 10780.0130
PRO 10790.0124
THR 10800.0092
PRO 10810.0379
VAL 10820.0070
ASN 10830.0099
ILE 10840.0047
ILE 10840.0047
ILE 10850.0086
GLY 10860.0094
ARG 10870.0139
ASN 10880.0166
LEU 10890.0208
LEU 10900.0204
THR 10910.0197
THR 10910.0197
THR 10910.0193
GLN 10920.0221
ILE 10930.0227
GLY 10940.0200
CYS 10950.0243
THR 10960.0172
LEU 10970.0128
ASN 10980.0168
PHE 10990.0332

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.