CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

CA strain for 2602061631263072433

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1001GLN 1002 0.0801
GLN 1002ILE 1003 -0.0384
ILE 1003THR 1004 0.1198
THR 1004LEU 1005 0.0024
LEU 1005TRP 1006 -0.0456
TRP 1006LYS 1007 0.0605
LYS 1007LYS 1007 0.0009
LYS 1007ARG 1008 0.0019
ARG 1008ARG 1008 0.0092
ARG 1008PRO 1009 -0.0307
PRO 1009LEU 1010 0.0971
LEU 1010VAL 1011 0.1129
VAL 1011THR 1012 0.1328
THR 1012ILE 1013 0.0135
ILE 1013LYS 1014 0.0479
LYS 1014ILE 1015 0.0381
ILE 1015GLY 1016 0.0540
GLY 1016GLY 1017 0.0407
GLY 1017GLN 1018 0.0289
GLN 1018LEU 1019 0.0824
LEU 1019LYS 1020 -0.0293
LYS 1020GLU 1021 0.1411
GLU 1021GLU 1021 0.0124
GLU 1021ALA 1022 -0.0129
ALA 1022LEU 1023 0.0828
LEU 1023LEU 1024 -0.0024
LEU 1024ASP 1025 -0.0138
ASP 1025THR 1026 0.0192
THR 1026GLY 1027 0.0130
GLY 1027ALA 1028 -0.0984
ALA 1028ASP 1029 0.0292
ASP 1029ASP 1030 -0.1912
ASP 1030THR 1031 -0.0206
THR 1031VAL 1032 0.0382
VAL 1032VAL 1032 -0.0023
VAL 1032LEU 1033 -0.0270
LEU 1033GLU 1034 -0.0391
GLU 1034GLU 1035 0.0662
GLU 1035MET 1036 -0.0432
MET 1036MET 1036 -0.0056
MET 1036ASN 1037 0.0206
ASN 1037LEU 1038 -0.0391
LEU 1038PRO 1039 0.0253
PRO 1039GLY 1040 0.0950
GLY 1040ARG 1041 0.0656
ARG 1041TRP 1042 0.0363
TRP 1042LYS 1043 0.0227
LYS 1043PRO 1044 0.0215
PRO 1044LYS 1045 -0.0645
LYS 1045MET 1046 0.1652
MET 1046ILE 1047 -0.1085
ILE 1047GLY 1048 -0.0700
GLY 1048GLY 1049 0.0564
GLY 1049ILE 1050 -0.0304
ILE 1050GLY 1051 -0.0530
GLY 1051GLY 1052 -0.0122
GLY 1052PHE 1053 0.0733
PHE 1053ILE 1054 -0.1714
ILE 1054LYS 1055 -0.0795
LYS 1055VAL 1056 -0.0188
VAL 1056ARG 1057 -0.0216
ARG 1057GLN 1058 0.0054
GLN 1058TYR 1059 0.0772
TYR 1059ASP 1060 0.0180
ASP 1060GLN 1061 0.0765
GLN 1061ILE 1062 0.0402
ILE 1062LEU 1063 0.0893
LEU 1063ILE 1064 0.0409
ILE 1064ILE 1064 0.0025
ILE 1064GLU 1065 0.0303
GLU 1065ILE 1066 0.0105
ILE 1066CYS 1067 0.0056
CYS 1067GLY 1068 0.0353
GLY 1068HIS 1069 -0.0530
HIS 1069LYS 1070 0.0910
LYS 1070ALA 1071 -0.0128
ALA 1071ILE 1072 0.0642
ILE 1072GLY 1073 0.0503
GLY 1073THR 1074 0.1202
THR 1074VAL 1075 -0.0016
VAL 1075LEU 1076 0.0731
LEU 1076VAL 1077 -0.0291
VAL 1077GLY 1078 0.0121
GLY 1078PRO 1079 0.0435
PRO 1079THR 1080 0.0454
THR 1080PRO 1081 0.0414
PRO 1081VAL 1082 -0.0745
VAL 1082ASN 1083 0.0006
ASN 1083ILE 1084 0.0138
ILE 1084ILE 1084 -0.0162
ILE 1084ILE 1085 0.0216
ILE 1085GLY 1086 -0.0366
GLY 1086ARG 1087 0.0080
ARG 1087ASN 1088 -0.1546
ASN 1088LEU 1089 -0.0312
LEU 1089LEU 1090 -0.0485
LEU 1090THR 1091 0.0251
THR 1091THR 1091 0.0434
THR 1091THR 1091 -0.0002
THR 1091GLN 1092 -0.0663
GLN 1092ILE 1093 0.0190
ILE 1093GLY 1094 -0.0590
GLY 1094CYS 1095 0.0075
CYS 1095THR 1096 -0.0351
THR 1096LEU 1097 -0.0341
LEU 1097ASN 1098 0.0100
ASN 1098PHE 1099 -0.0036
PHE 1099PRO 1001 0.0065
PRO 1001GLN 1002 -0.0801
GLN 1002ILE 1003 0.0384
ILE 1003THR 1004 -0.1198
THR 1004LEU 1005 -0.0024
LEU 1005TRP 1006 0.0456
TRP 1006LYS 1007 -0.0605
LYS 1007LYS 1007 -0.0009
LYS 1007ARG 1008 -0.0019
ARG 1008ARG 1008 -0.0092
ARG 1008PRO 1009 0.0307
PRO 1009LEU 1010 -0.0971
LEU 1010VAL 1011 -0.1129
VAL 1011THR 1012 -0.1328
THR 1012ILE 1013 -0.0135
ILE 1013LYS 1014 -0.0479
LYS 1014ILE 1015 -0.0381
ILE 1015GLY 1016 -0.0540
GLY 1016GLY 1017 -0.0407
GLY 1017GLN 1018 -0.0289
GLN 1018LEU 1019 -0.0824
LEU 1019LYS 1020 0.0293
LYS 1020GLU 1021 -0.1411
GLU 1021GLU 1021 -0.0124
GLU 1021ALA 1022 0.0129
ALA 1022LEU 1023 -0.0828
LEU 1023LEU 1024 0.0024
LEU 1024ASP 1025 0.0138
ASP 1025THR 1026 -0.0192
THR 1026GLY 1027 -0.0130
GLY 1027ALA 1028 0.0984
ALA 1028ASP 1029 -0.0292
ASP 1029ASP 1030 0.1912
ASP 1030THR 1031 0.0206
THR 1031VAL 1032 -0.0382
VAL 1032VAL 1032 0.0023
VAL 1032LEU 1033 0.0270
LEU 1033GLU 1034 0.0391
GLU 1034GLU 1035 -0.0662
GLU 1035MET 1036 0.0432
MET 1036MET 1036 0.0056
MET 1036ASN 1037 -0.0206
ASN 1037LEU 1038 0.0391
LEU 1038PRO 1039 -0.0253
PRO 1039GLY 1040 -0.0950
GLY 1040ARG 1041 -0.0656
ARG 1041TRP 1042 -0.0363
TRP 1042LYS 1043 -0.0227
LYS 1043PRO 1044 -0.0215
PRO 1044LYS 1045 0.0645
LYS 1045MET 1046 -0.1652
MET 1046ILE 1047 0.1085
ILE 1047GLY 1048 0.0700
GLY 1048GLY 1049 -0.0564
GLY 1049ILE 1050 0.0304
ILE 1050GLY 1051 0.0530
GLY 1051GLY 1052 0.0122
GLY 1052PHE 1053 -0.0733
PHE 1053ILE 1054 0.1714
ILE 1054LYS 1055 0.0795
LYS 1055VAL 1056 0.0188
VAL 1056ARG 1057 0.0216
ARG 1057GLN 1058 -0.0054
GLN 1058TYR 1059 -0.0772
TYR 1059ASP 1060 -0.0180
ASP 1060GLN 1061 -0.0765
GLN 1061ILE 1062 -0.0402
ILE 1062LEU 1063 -0.0893
LEU 1063ILE 1064 -0.0409
ILE 1064ILE 1064 -0.0025
ILE 1064GLU 1065 -0.0303
GLU 1065ILE 1066 -0.0105
ILE 1066CYS 1067 -0.0056
CYS 1067GLY 1068 -0.0353
GLY 1068HIS 1069 0.0530
HIS 1069LYS 1070 -0.0910
LYS 1070ALA 1071 0.0128
ALA 1071ILE 1072 -0.0642
ILE 1072GLY 1073 -0.0503
GLY 1073THR 1074 -0.1202
THR 1074VAL 1075 0.0016
VAL 1075LEU 1076 -0.0731
LEU 1076VAL 1077 0.0291
VAL 1077GLY 1078 -0.0121
GLY 1078PRO 1079 -0.0435
PRO 1079THR 1080 -0.0454
THR 1080PRO 1081 -0.0414
PRO 1081VAL 1082 0.0745
VAL 1082ASN 1083 -0.0006
ASN 1083ILE 1084 -0.0138
ILE 1084ILE 1084 0.0162
ILE 1084ILE 1085 -0.0216
ILE 1085GLY 1086 0.0366
GLY 1086ARG 1087 -0.0080
ARG 1087ASN 1088 0.1546
ASN 1088LEU 1089 0.0312
LEU 1089LEU 1090 0.0485
LEU 1090THR 1091 -0.0251
THR 1091THR 1091 -0.0434
THR 1091THR 1091 0.0002
THR 1091GLN 1092 0.0663
GLN 1092ILE 1093 -0.0190
ILE 1093GLY 1094 0.0590
GLY 1094CYS 1095 -0.0075
CYS 1095THR 1096 0.0351
THR 1096LEU 1097 0.0341
LEU 1097ASN 1098 -0.0100
ASN 1098PHE 1099 0.0036

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.