CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1184
PRO 10010.0149
GLN 10020.0153
ILE 10030.0130
THR 10040.0116
LEU 10050.0099
TRP 10060.0103
LYS 10070.0090
LYS 10070.0090
ARG 10080.0081
ARG 10080.0081
PRO 10090.0098
LEU 10100.0103
VAL 10110.0107
THR 10120.0139
ILE 10130.0115
LYS 10140.0155
ILE 10150.0178
GLY 10160.0268
GLY 10170.0290
GLN 10180.0263
LEU 10190.0215
LYS 10200.0181
GLU 10210.0139
GLU 10210.0139
ALA 10220.0093
LEU 10230.0083
LEU 10240.0080
ASP 10250.0082
THR 10260.0085
GLY 10270.0076
ALA 10280.0071
ASP 10290.0067
ASP 10300.0061
THR 10310.0030
VAL 10320.0021
VAL 10320.0022
LEU 10330.0090
GLU 10340.0164
GLU 10350.0217
MET 10360.0271
MET 10360.0270
ASN 10370.0334
LEU 10380.0322
PRO 10390.0403
GLY 10400.0458
ARG 10410.0489
TRP 10420.0370
LYS 10430.0359
PRO 10440.0263
LYS 10450.0243
MET 10460.0282
ILE 10470.0286
GLY 10480.0473
GLY 10490.0748
ILE 10500.1036
GLY 10510.1184
GLY 10520.0704
PHE 10530.0441
ILE 10540.0223
LYS 10550.0073
VAL 10560.0063
ARG 10570.0181
GLN 10580.0228
TYR 10590.0259
ASP 10600.0288
GLN 10610.0253
ILE 10620.0203
LEU 10630.0157
ILE 10640.0107
ILE 10640.0108
GLU 10650.0089
ILE 10660.0069
CYS 10670.0094
GLY 10680.0089
HIS 10690.0045
LYS 10700.0057
ALA 10710.0064
ILE 10720.0115
GLY 10730.0132
THR 10740.0153
VAL 10750.0111
LEU 10760.0092
VAL 10770.0113
GLY 10780.0081
PRO 10790.0148
THR 10800.0119
PRO 10810.0205
VAL 10820.0140
ASN 10830.0107
ILE 10840.0066
ILE 10840.0066
ILE 10850.0049
GLY 10860.0062
ARG 10870.0081
ASN 10880.0081
LEU 10890.0054
LEU 10900.0076
THR 10910.0095
THR 10910.0095
THR 10910.0094
GLN 10920.0081
ILE 10930.0075
GLY 10940.0112
CYS 10950.0110
THR 10960.0126
LEU 10970.0121
ASN 10980.0139
PHE 10990.0129
PRO 10010.0149
GLN 10020.0153
ILE 10030.0130
THR 10040.0116
LEU 10050.0099
TRP 10060.0103
LYS 10070.0090
LYS 10070.0090
ARG 10080.0081
ARG 10080.0081
PRO 10090.0098
LEU 10100.0103
VAL 10110.0107
THR 10120.0139
ILE 10130.0115
LYS 10140.0155
ILE 10150.0178
GLY 10160.0268
GLY 10170.0290
GLN 10180.0263
LEU 10190.0215
LYS 10200.0181
GLU 10210.0139
GLU 10210.0139
ALA 10220.0093
LEU 10230.0083
LEU 10240.0080
ASP 10250.0082
THR 10260.0085
GLY 10270.0076
ALA 10280.0071
ASP 10290.0067
ASP 10300.0061
THR 10310.0030
VAL 10320.0021
VAL 10320.0022
LEU 10330.0090
GLU 10340.0164
GLU 10350.0217
MET 10360.0271
MET 10360.0270
ASN 10370.0334
LEU 10380.0322
PRO 10390.0403
GLY 10400.0458
ARG 10410.0489
TRP 10420.0370
LYS 10430.0359
PRO 10440.0263
LYS 10450.0243
MET 10460.0282
ILE 10470.0286
GLY 10480.0473
GLY 10490.0748
ILE 10500.1036
GLY 10510.1184
GLY 10520.0704
PHE 10530.0441
ILE 10540.0223
LYS 10550.0073
VAL 10560.0063
ARG 10570.0181
GLN 10580.0228
TYR 10590.0259
ASP 10600.0288
GLN 10610.0253
ILE 10620.0203
LEU 10630.0157
ILE 10640.0107
ILE 10640.0108
GLU 10650.0089
ILE 10660.0069
CYS 10670.0094
GLY 10680.0089
HIS 10690.0045
LYS 10700.0057
ALA 10710.0064
ILE 10720.0115
GLY 10730.0132
THR 10740.0153
VAL 10750.0111
LEU 10760.0092
VAL 10770.0113
GLY 10780.0081
PRO 10790.0148
THR 10800.0119
PRO 10810.0205
VAL 10820.0140
ASN 10830.0107
ILE 10840.0066
ILE 10840.0066
ILE 10850.0049
GLY 10860.0062
ARG 10870.0081
ASN 10880.0081
LEU 10890.0054
LEU 10900.0076
THR 10910.0095
THR 10910.0095
THR 10910.0094
GLN 10920.0081
ILE 10930.0075
GLY 10940.0112
CYS 10950.0110
THR 10960.0126
LEU 10970.0121
ASN 10980.0139
PHE 10990.0129

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.