CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 89  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0731
PRO 10010.0098
GLN 10020.0188
ILE 10030.0084
THR 10040.0062
LEU 10050.0081
TRP 10060.0100
LYS 10070.0146
LYS 10070.0142
ARG 10080.0168
ARG 10080.0167
PRO 10090.0128
LEU 10100.0160
VAL 10110.0196
THR 10120.0211
ILE 10130.0171
LYS 10140.0196
ILE 10150.0039
GLY 10160.0118
GLY 10170.0470
GLN 10180.0174
LEU 10190.0447
LYS 10200.0143
GLU 10210.0135
GLU 10210.0136
ALA 10220.0060
LEU 10230.0079
LEU 10240.0078
ASP 10250.0030
THR 10260.0040
GLY 10270.0060
ALA 10280.0035
ASP 10290.0016
ASP 10300.0082
THR 10310.0103
VAL 10320.0095
VAL 10320.0094
LEU 10330.0091
GLU 10340.0168
GLU 10350.0155
MET 10360.0164
MET 10360.0163
ASN 10370.0334
LEU 10380.0129
PRO 10390.0333
GLY 10400.0731
ARG 10410.0676
TRP 10420.0120
LYS 10430.0238
PRO 10440.0249
LYS 10450.0208
MET 10460.0350
ILE 10470.0184
GLY 10480.0385
GLY 10490.0363
ILE 10500.0322
GLY 10510.0262
GLY 10520.0412
PHE 10530.0188
ILE 10540.0166
LYS 10550.0321
VAL 10560.0232
ARG 10570.0142
GLN 10580.0090
TYR 10590.0028
ASP 10600.0085
GLN 10610.0120
ILE 10620.0096
LEU 10630.0051
ILE 10640.0103
ILE 10640.0102
GLU 10650.0136
ILE 10660.0152
CYS 10670.0272
GLY 10680.0496
HIS 10690.0285
LYS 10700.0189
ALA 10710.0123
ILE 10720.0135
GLY 10730.0166
THR 10740.0083
VAL 10750.0070
LEU 10760.0107
VAL 10770.0106
GLY 10780.0144
PRO 10790.0181
THR 10800.0230
PRO 10810.0450
VAL 10820.0139
ASN 10830.0101
ILE 10840.0094
ILE 10840.0094
ILE 10850.0075
GLY 10860.0081
ARG 10870.0057
ASN 10880.0096
LEU 10890.0123
LEU 10900.0090
THR 10910.0086
THR 10910.0086
THR 10910.0086
GLN 10920.0099
ILE 10930.0122
GLY 10940.0192
CYS 10950.0113
THR 10960.0122
LEU 10970.0085
ASN 10980.0151
PHE 10990.0164
PRO 10010.0098
GLN 10020.0188
ILE 10030.0084
THR 10040.0062
LEU 10050.0081
TRP 10060.0100
LYS 10070.0146
LYS 10070.0142
ARG 10080.0168
ARG 10080.0167
PRO 10090.0128
LEU 10100.0160
VAL 10110.0196
THR 10120.0211
ILE 10130.0171
LYS 10140.0196
ILE 10150.0039
GLY 10160.0118
GLY 10170.0470
GLN 10180.0174
LEU 10190.0447
LYS 10200.0143
GLU 10210.0135
GLU 10210.0136
ALA 10220.0060
LEU 10230.0079
LEU 10240.0078
ASP 10250.0030
THR 10260.0040
GLY 10270.0060
ALA 10280.0035
ASP 10290.0016
ASP 10300.0082
THR 10310.0103
VAL 10320.0095
VAL 10320.0094
LEU 10330.0091
GLU 10340.0168
GLU 10350.0155
MET 10360.0164
MET 10360.0163
ASN 10370.0334
LEU 10380.0129
PRO 10390.0333
GLY 10400.0731
ARG 10410.0676
TRP 10420.0120
LYS 10430.0238
PRO 10440.0249
LYS 10450.0208
MET 10460.0350
ILE 10470.0184
GLY 10480.0385
GLY 10490.0363
ILE 10500.0322
GLY 10510.0262
GLY 10520.0412
PHE 10530.0188
ILE 10540.0166
LYS 10550.0321
VAL 10560.0232
ARG 10570.0142
GLN 10580.0090
TYR 10590.0028
ASP 10600.0085
GLN 10610.0120
ILE 10620.0096
LEU 10630.0051
ILE 10640.0103
ILE 10640.0102
GLU 10650.0136
ILE 10660.0152
CYS 10670.0272
GLY 10680.0496
HIS 10690.0285
LYS 10700.0189
ALA 10710.0123
ILE 10720.0135
GLY 10730.0166
THR 10740.0083
VAL 10750.0070
LEU 10760.0107
VAL 10770.0106
GLY 10780.0144
PRO 10790.0181
THR 10800.0230
PRO 10810.0450
VAL 10820.0139
ASN 10830.0101
ILE 10840.0094
ILE 10840.0094
ILE 10850.0075
GLY 10860.0081
ARG 10870.0057
ASN 10880.0096
LEU 10890.0123
LEU 10900.0090
THR 10910.0086
THR 10910.0086
THR 10910.0086
GLN 10920.0099
ILE 10930.0122
GLY 10940.0192
CYS 10950.0113
THR 10960.0122
LEU 10970.0085
ASN 10980.0151
PHE 10990.0164

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.