CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

CA strain for 2602061631263072433

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1001GLN 1002 -0.1695
GLN 1002ILE 1003 0.0177
ILE 1003THR 1004 -0.0919
THR 1004LEU 1005 0.0205
LEU 1005TRP 1006 0.0155
TRP 1006LYS 1007 -0.0008
LYS 1007LYS 1007 -0.0066
LYS 1007ARG 1008 -0.0063
ARG 1008ARG 1008 -0.0092
ARG 1008PRO 1009 -0.0064
PRO 1009LEU 1010 -0.0422
LEU 1010VAL 1011 0.1193
VAL 1011THR 1012 -0.0316
THR 1012ILE 1013 0.0085
ILE 1013LYS 1014 0.0397
LYS 1014ILE 1015 -0.0435
ILE 1015GLY 1016 -0.0115
GLY 1016GLY 1017 0.0017
GLY 1017GLN 1018 0.0239
GLN 1018LEU 1019 0.0032
LEU 1019LYS 1020 0.0167
LYS 1020GLU 1021 0.0193
GLU 1021GLU 1021 -0.0096
GLU 1021ALA 1022 0.0031
ALA 1022LEU 1023 0.1151
LEU 1023LEU 1024 0.0036
LEU 1024ASP 1025 0.0130
ASP 1025THR 1026 0.0163
THR 1026GLY 1027 -0.0031
GLY 1027ALA 1028 0.2544
ALA 1028ASP 1029 -0.0342
ASP 1029ASP 1030 0.2125
ASP 1030THR 1031 0.0376
THR 1031VAL 1032 -0.0099
VAL 1032VAL 1032 0.0022
VAL 1032LEU 1033 0.0075
LEU 1033GLU 1034 -0.0116
GLU 1034GLU 1035 0.0464
GLU 1035MET 1036 -0.0084
MET 1036MET 1036 0.0014
MET 1036ASN 1037 0.0282
ASN 1037LEU 1038 -0.0078
LEU 1038PRO 1039 0.0264
PRO 1039GLY 1040 -0.0167
GLY 1040ARG 1041 0.0005
ARG 1041TRP 1042 0.0202
TRP 1042LYS 1043 0.0156
LYS 1043PRO 1044 0.0777
PRO 1044LYS 1045 0.0217
LYS 1045MET 1046 0.1594
MET 1046ILE 1047 -0.0698
ILE 1047GLY 1048 0.0563
GLY 1048GLY 1049 -0.1287
GLY 1049ILE 1050 0.0108
ILE 1050GLY 1051 0.0579
GLY 1051GLY 1052 -0.0360
GLY 1052PHE 1053 0.1234
PHE 1053ILE 1054 -0.0758
ILE 1054LYS 1055 0.0805
LYS 1055VAL 1056 0.0238
VAL 1056ARG 1057 0.0181
ARG 1057GLN 1058 -0.0129
GLN 1058TYR 1059 -0.0062
TYR 1059ASP 1060 -0.0049
ASP 1060GLN 1061 -0.0257
GLN 1061ILE 1062 0.0277
ILE 1062LEU 1063 -0.0534
LEU 1063ILE 1064 0.0092
ILE 1064ILE 1064 0.0081
ILE 1064GLU 1065 -0.0121
GLU 1065ILE 1066 -0.0003
ILE 1066CYS 1067 -0.0303
CYS 1067GLY 1068 0.0305
GLY 1068HIS 1069 0.0170
HIS 1069LYS 1070 -0.1078
LYS 1070ALA 1071 0.0164
ALA 1071ILE 1072 -0.0412
ILE 1072GLY 1073 0.0197
GLY 1073THR 1074 -0.0192
THR 1074VAL 1075 -0.0083
VAL 1075LEU 1076 -0.0583
LEU 1076VAL 1077 0.0170
VAL 1077GLY 1078 0.0155
GLY 1078PRO 1079 0.0487
PRO 1079THR 1080 0.0194
THR 1080PRO 1081 0.0220
PRO 1081VAL 1082 0.0977
VAL 1082ASN 1083 0.0422
ASN 1083ILE 1084 0.0534
ILE 1084ILE 1084 0.1137
ILE 1084ILE 1085 -0.0064
ILE 1085GLY 1086 0.0304
GLY 1086ARG 1087 -0.0151
ARG 1087ASN 1088 0.0663
ASN 1088LEU 1089 0.0385
LEU 1089LEU 1090 -0.0297
LEU 1090THR 1091 0.0148
THR 1091THR 1091 0.0182
THR 1091THR 1091 -0.0076
THR 1091GLN 1092 -0.0241
GLN 1092ILE 1093 0.0100
ILE 1093GLY 1094 -0.1386
GLY 1094CYS 1095 0.0290
CYS 1095THR 1096 -0.1173
THR 1096LEU 1097 -0.0998
LEU 1097ASN 1098 0.0360
ASN 1098PHE 1099 -0.1453
PHE 1099PRO 1001 0.0684
PRO 1001GLN 1002 -0.1695
GLN 1002ILE 1003 0.0177
ILE 1003THR 1004 -0.0916
THR 1004LEU 1005 0.0204
LEU 1005TRP 1006 0.0155
TRP 1006LYS 1007 -0.0008
LYS 1007LYS 1007 -0.0066
LYS 1007ARG 1008 -0.0063
ARG 1008ARG 1008 -0.0092
ARG 1008PRO 1009 -0.0064
PRO 1009LEU 1010 -0.0422
LEU 1010VAL 1011 0.1193
VAL 1011THR 1012 -0.0316
THR 1012ILE 1013 0.0085
ILE 1013LYS 1014 0.0397
LYS 1014ILE 1015 -0.0435
ILE 1015GLY 1016 -0.0115
GLY 1016GLY 1017 0.0017
GLY 1017GLN 1018 0.0239
GLN 1018LEU 1019 0.0032
LEU 1019LYS 1020 0.0167
LYS 1020GLU 1021 0.0193
GLU 1021GLU 1021 -0.0096
GLU 1021ALA 1022 0.0031
ALA 1022LEU 1023 0.1151
LEU 1023LEU 1024 0.0036
LEU 1024ASP 1025 0.0130
ASP 1025THR 1026 0.0163
THR 1026GLY 1027 -0.0031
GLY 1027ALA 1028 0.2544
ALA 1028ASP 1029 -0.0342
ASP 1029ASP 1030 0.2125
ASP 1030THR 1031 0.0376
THR 1031VAL 1032 -0.0099
VAL 1032VAL 1032 0.0022
VAL 1032LEU 1033 0.0075
LEU 1033GLU 1034 -0.0116
GLU 1034GLU 1035 0.0464
GLU 1035MET 1036 -0.0084
MET 1036MET 1036 0.0014
MET 1036ASN 1037 0.0282
ASN 1037LEU 1038 -0.0078
LEU 1038PRO 1039 0.0264
PRO 1039GLY 1040 -0.0167
GLY 1040ARG 1041 0.0003
ARG 1041TRP 1042 0.0206
TRP 1042LYS 1043 0.0156
LYS 1043PRO 1044 0.0777
PRO 1044LYS 1045 0.0217
LYS 1045MET 1046 0.1594
MET 1046ILE 1047 -0.0698
ILE 1047GLY 1048 0.0563
GLY 1048GLY 1049 -0.1287
GLY 1049ILE 1050 0.0108
ILE 1050GLY 1051 0.0579
GLY 1051GLY 1052 -0.0360
GLY 1052PHE 1053 0.1234
PHE 1053ILE 1054 -0.0758
ILE 1054LYS 1055 0.0805
LYS 1055VAL 1056 0.0238
VAL 1056ARG 1057 0.0181
ARG 1057GLN 1058 -0.0129
GLN 1058TYR 1059 -0.0062
TYR 1059ASP 1060 -0.0049
ASP 1060GLN 1061 -0.0257
GLN 1061ILE 1062 0.0277
ILE 1062LEU 1063 -0.0534
LEU 1063ILE 1064 0.0092
ILE 1064ILE 1064 0.0081
ILE 1064GLU 1065 -0.0121
GLU 1065ILE 1066 -0.0003
ILE 1066CYS 1067 -0.0303
CYS 1067GLY 1068 0.0305
GLY 1068HIS 1069 0.0170
HIS 1069LYS 1070 -0.1078
LYS 1070ALA 1071 0.0164
ALA 1071ILE 1072 -0.0412
ILE 1072GLY 1073 0.0197
GLY 1073THR 1074 -0.0192
THR 1074VAL 1075 -0.0083
VAL 1075LEU 1076 -0.0583
LEU 1076VAL 1077 0.0170
VAL 1077GLY 1078 0.0155
GLY 1078PRO 1079 0.0487
PRO 1079THR 1080 0.0194
THR 1080PRO 1081 0.0220
PRO 1081VAL 1082 0.0977
VAL 1082ASN 1083 0.0422
ASN 1083ILE 1084 0.0534
ILE 1084ILE 1084 0.1137
ILE 1084ILE 1085 -0.0064
ILE 1085GLY 1086 0.0304
GLY 1086ARG 1087 -0.0151
ARG 1087ASN 1088 0.0663
ASN 1088LEU 1089 0.0385
LEU 1089LEU 1090 -0.0297
LEU 1090THR 1091 0.0148
THR 1091THR 1091 0.0182
THR 1091THR 1091 -0.0076
THR 1091GLN 1092 -0.0241
GLN 1092ILE 1093 0.0100
ILE 1093GLY 1094 -0.1381
GLY 1094CYS 1095 0.0287
CYS 1095THR 1096 -0.1173
THR 1096LEU 1097 -0.0998
LEU 1097ASN 1098 0.0360
ASN 1098PHE 1099 -0.1453

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.