CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

<R2> analysis for 2602061631263072433

---  normal mode 9  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0641
PRO 10010.0103
GLN 10020.0148
ILE 10030.0160
THR 10040.0196
LEU 10050.0188
TRP 10060.0205
LYS 10070.0224
LYS 10070.0225
ARG 10080.0200
ARG 10080.0200
PRO 10090.0174
LEU 10100.0141
VAL 10110.0074
THR 10120.0068
ILE 10130.0095
LYS 10140.0170
ILE 10150.0204
GLY 10160.0298
GLY 10170.0335
GLN 10180.0285
LEU 10190.0204
LYS 10200.0159
GLU 10210.0102
GLU 10210.0101
ALA 10220.0106
LEU 10230.0137
LEU 10240.0141
ASP 10250.0173
THR 10260.0182
GLY 10270.0187
ALA 10280.0183
ASP 10290.0170
ASP 10300.0148
THR 10310.0130
VAL 10320.0200
VAL 10320.0200
LEU 10330.0213
GLU 10340.0291
GLU 10350.0372
MET 10360.0359
MET 10360.0357
ASN 10370.0397
LEU 10380.0341
PRO 10390.0372
GLY 10400.0360
ARG 10410.0362
TRP 10420.0342
LYS 10430.0361
PRO 10440.0388
LYS 10450.0353
MET 10460.0370
ILE 10470.0368
GLY 10480.0386
GLY 10490.0390
ILE 10500.0349
GLY 10510.0641
GLY 10520.0440
PHE 10530.0396
ILE 10540.0421
LYS 10550.0417
VAL 10560.0378
ARG 10570.0349
GLN 10580.0270
TYR 10590.0234
ASP 10600.0161
GLN 10610.0150
ILE 10620.0174
LEU 10630.0170
ILE 10640.0126
ILE 10640.0127
GLU 10650.0129
ILE 10660.0077
CYS 10670.0080
GLY 10680.0143
HIS 10690.0130
LYS 10700.0154
ALA 10710.0119
ILE 10720.0115
GLY 10730.0069
THR 10740.0102
VAL 10750.0153
LEU 10760.0232
VAL 10770.0297
GLY 10780.0366
PRO 10790.0401
THR 10800.0317
PRO 10810.0238
VAL 10820.0223
ASN 10830.0174
ILE 10840.0148
ILE 10840.0147
ILE 10850.0101
GLY 10860.0137
ARG 10870.0153
ASN 10880.0123
LEU 10890.0088
LEU 10900.0130
THR 10910.0156
THR 10910.0155
THR 10910.0154
GLN 10920.0132
ILE 10930.0132
GLY 10940.0160
CYS 10950.0151
THR 10960.0170
LEU 10970.0162
ASN 10980.0143
PHE 10990.0135
PRO 10010.0103
GLN 10020.0148
ILE 10030.0160
THR 10040.0196
LEU 10050.0188
TRP 10060.0205
LYS 10070.0224
LYS 10070.0225
ARG 10080.0200
ARG 10080.0200
PRO 10090.0174
LEU 10100.0141
VAL 10110.0074
THR 10120.0068
ILE 10130.0095
LYS 10140.0170
ILE 10150.0204
GLY 10160.0298
GLY 10170.0335
GLN 10180.0285
LEU 10190.0204
LYS 10200.0159
GLU 10210.0102
GLU 10210.0101
ALA 10220.0106
LEU 10230.0137
LEU 10240.0141
ASP 10250.0173
THR 10260.0182
GLY 10270.0187
ALA 10280.0183
ASP 10290.0170
ASP 10300.0148
THR 10310.0130
VAL 10320.0200
VAL 10320.0200
LEU 10330.0213
GLU 10340.0291
GLU 10350.0372
MET 10360.0359
MET 10360.0357
ASN 10370.0397
LEU 10380.0341
PRO 10390.0372
GLY 10400.0360
ARG 10410.0362
TRP 10420.0342
LYS 10430.0361
PRO 10440.0388
LYS 10450.0353
MET 10460.0370
ILE 10470.0368
GLY 10480.0386
GLY 10490.0390
ILE 10500.0349
GLY 10510.0641
GLY 10520.0440
PHE 10530.0396
ILE 10540.0421
LYS 10550.0417
VAL 10560.0378
ARG 10570.0349
GLN 10580.0270
TYR 10590.0234
ASP 10600.0161
GLN 10610.0150
ILE 10620.0174
LEU 10630.0170
ILE 10640.0126
ILE 10640.0127
GLU 10650.0129
ILE 10660.0077
CYS 10670.0080
GLY 10680.0143
HIS 10690.0130
LYS 10700.0154
ALA 10710.0119
ILE 10720.0115
GLY 10730.0069
THR 10740.0102
VAL 10750.0153
LEU 10760.0232
VAL 10770.0297
GLY 10780.0366
PRO 10790.0401
THR 10800.0317
PRO 10810.0238
VAL 10820.0223
ASN 10830.0174
ILE 10840.0148
ILE 10840.0147
ILE 10850.0101
GLY 10860.0137
ARG 10870.0153
ASN 10880.0123
LEU 10890.0088
LEU 10900.0130
THR 10910.0156
THR 10910.0155
THR 10910.0154
GLN 10920.0132
ILE 10930.0132
GLY 10940.0160
CYS 10950.0151
THR 10960.0170
LEU 10970.0162
ASN 10980.0143
PHE 10990.0135

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.