CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HIV_apo  ***

CA distance fluctuations for 2602061631263072433

---  normal mode 9  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
PRO 1009 0.11 PRO 1001 -0.31 GLY 1051
LYS 1007 0.06 GLN 1002 -0.33 GLY 1051
LYS 1007 0.08 ILE 1003 -0.38 GLY 1051
THR 1096 0.07 THR 1004 -0.38 GLY 1051
LYS 1045 0.06 LEU 1005 -0.42 GLY 1051
LYS 1045 0.05 TRP 1006 -0.41 GLY 1051
LYS 1045 0.10 LYS 1007 -0.50 GLY 1051
LYS 1045 0.10 LYS 1007 -0.49 GLY 1051
LYS 1045 0.16 ARG 1008 -0.57 GLY 1051
LYS 1045 0.16 ARG 1008 -0.56 GLY 1051
ILE 1047 0.14 PRO 1009 -0.52 GLY 1051
ILE 1047 0.23 LEU 1010 -0.52 GLY 1051
ILE 1047 0.23 VAL 1011 -0.44 GLY 1051
ILE 1047 0.26 THR 1012 -0.38 GLY 1051
ILE 1047 0.27 ILE 1013 -0.35 GLY 1051
ILE 1047 0.28 LYS 1014 -0.28 GLY 1051
ILE 1047 0.31 ILE 1015 -0.25 GLY 1051
GLY 1048 0.34 GLY 1016 -0.18 GLY 1051
GLY 1048 0.32 GLY 1017 -0.19 GLY 1051
GLY 1048 0.35 GLN 1018 -0.23 GLY 1051
GLY 1048 0.33 LEU 1019 -0.29 GLY 1051
GLY 1048 0.38 LYS 1020 -0.34 GLY 1051
ILE 1047 0.36 GLU 1021 -0.43 GLY 1051
ILE 1047 0.36 GLU 1021 -0.43 GLY 1051
ILE 1047 0.36 ALA 1022 -0.49 GLY 1051
ILE 1047 0.28 LEU 1023 -0.58 GLY 1051
ILE 1047 0.19 LEU 1024 -0.52 GLY 1051
THR 1080 0.19 ASP 1025 -0.59 GLY 1051
THR 1080 0.12 THR 1026 -0.51 GLY 1051
ALA 1028 0.25 GLY 1027 -0.65 GLY 1051
VAL 1082 0.34 ALA 1028 -0.62 ILE 1050
VAL 1082 0.28 ASP 1029 -0.55 ILE 1050
VAL 1082 0.34 ASP 1030 -0.44 GLY 1051
THR 1080 0.35 THR 1031 -0.43 GLY 1051
THR 1080 0.45 VAL 1032 -0.42 GLY 1051
THR 1080 0.46 VAL 1032 -0.42 GLY 1051
GLY 1048 0.49 LEU 1033 -0.37 GLY 1051
GLY 1048 0.61 GLU 1034 -0.32 GLY 1051
GLY 1048 0.58 GLU 1035 -0.18 GLY 1051
GLY 1048 0.49 MET 1036 -0.16 GLY 1051
GLY 1048 0.49 MET 1036 -0.17 GLY 1051
GLY 1048 0.42 ASN 1037 -0.11 GLY 1051
ILE 1054 0.37 LEU 1038 -0.12 GLY 1051
ILE 1054 0.33 PRO 1039 -0.08 HIS 1069
ILE 1054 0.31 GLY 1040 -0.08 LEU 1063
PRO 1079 0.33 ARG 1041 -0.06 LEU 1063
PRO 1079 0.38 TRP 1042 -0.05 LEU 1063
PRO 1079 0.41 LYS 1043 -0.03 ILE 1064
PRO 1079 0.47 PRO 1044 -0.04 VAL 1056
PRO 1081 0.49 LYS 1045 -0.04 PRO 1081
PRO 1081 0.56 MET 1046 -0.14 GLY 1051
PRO 1081 0.70 ILE 1047 -0.25 GLY 1051
PRO 1081 0.85 GLY 1048 -0.47 GLY 1051
PRO 1079 0.62 GLY 1049 -0.72 GLY 1051
PRO 1079 0.74 ILE 1050 -0.97 GLY 1051
PRO 1079 0.49 GLY 1051 -1.16 GLY 1051
PRO 1079 0.50 GLY 1052 -0.74 GLY 1051
PRO 1079 0.64 PHE 1053 -0.38 PRO 1081
PRO 1079 0.71 ILE 1054 -0.21 PRO 1081
PRO 1079 0.61 LYS 1055 -0.08 PRO 1081
PRO 1079 0.55 VAL 1056 -0.06 GLY 1051
PRO 1079 0.47 ARG 1057 -0.04 ILE 1064
THR 1080 0.41 GLN 1058 -0.09 GLY 1051
PRO 1079 0.34 TYR 1059 -0.11 GLY 1051
THR 1080 0.28 ASP 1060 -0.13 GLY 1051
THR 1080 0.23 GLN 1061 -0.16 GLY 1051
ILE 1054 0.26 ILE 1062 -0.19 GLY 1051
ILE 1047 0.23 LEU 1063 -0.22 GLY 1051
ILE 1047 0.24 ILE 1064 -0.27 GLY 1051
ILE 1047 0.24 ILE 1064 -0.27 GLY 1051
ILE 1047 0.22 GLU 1065 -0.29 GLY 1051
ILE 1047 0.21 ILE 1066 -0.34 GLY 1051
ILE 1047 0.19 CYS 1067 -0.34 GLY 1051
ILE 1047 0.17 GLY 1068 -0.29 GLY 1051
ILE 1047 0.16 HIS 1069 -0.28 GLY 1051
ILE 1047 0.18 LYS 1070 -0.26 GLY 1051
ILE 1047 0.17 ALA 1071 -0.26 GLY 1051
ILE 1047 0.19 ILE 1072 -0.23 GLY 1051
THR 1080 0.22 GLY 1073 -0.23 GLY 1051
THR 1080 0.28 THR 1074 -0.22 GLY 1051
THR 1080 0.34 VAL 1075 -0.26 GLY 1051
THR 1080 0.43 LEU 1076 -0.23 GLY 1051
ILE 1054 0.48 VAL 1077 -0.20 GLY 1051
GLY 1048 0.59 GLY 1078 -0.18 GLY 1051
GLY 1048 0.75 PRO 1079 -0.24 GLY 1051
GLY 1048 0.76 THR 1080 -0.50 GLY 1051
GLY 1048 0.85 PRO 1081 -0.76 GLY 1051
GLY 1048 0.65 VAL 1082 -0.66 GLY 1051
ILE 1047 0.48 ASN 1083 -0.53 GLY 1051
ILE 1047 0.38 ILE 1084 -0.57 GLY 1051
ILE 1047 0.38 ILE 1084 -0.57 GLY 1051
THR 1080 0.26 ILE 1085 -0.48 GLY 1051
THR 1080 0.25 GLY 1086 -0.50 GLY 1051
THR 1080 0.16 ARG 1087 -0.42 ILE 1050
THR 1080 0.18 ASN 1088 -0.36 ILE 1050
THR 1080 0.18 LEU 1089 -0.35 GLY 1051
THR 1080 0.13 LEU 1090 -0.38 GLY 1051
THR 1080 0.09 THR 1091 -0.32 GLY 1051
THR 1080 0.09 THR 1091 -0.33 GLY 1051
THR 1080 0.09 THR 1091 -0.33 GLY 1051
ILE 1047 0.11 GLN 1092 -0.29 GLY 1051
ILE 1047 0.11 ILE 1093 -0.31 GLY 1051
ILE 1047 0.07 GLY 1094 -0.30 GLY 1051
ILE 1047 0.06 CYS 1095 -0.34 GLY 1051
THR 1004 0.07 THR 1096 -0.34 GLY 1051
LYS 1045 0.05 LEU 1097 -0.37 GLY 1051
THR 1004 0.06 ASN 1098 -0.33 GLY 1051
PRO 1009 0.08 PHE 1099 -0.31 GLY 1051
PRO 1009 0.11 PRO 1001 -0.31 GLY 1051
LYS 1007 0.06 GLN 1002 -0.33 GLY 1051
LYS 1007 0.08 ILE 1003 -0.38 GLY 1051
THR 1096 0.07 THR 1004 -0.38 GLY 1051
LYS 1045 0.06 LEU 1005 -0.42 GLY 1051
LYS 1045 0.05 TRP 1006 -0.41 GLY 1051
LYS 1045 0.10 LYS 1007 -0.50 GLY 1051
LYS 1045 0.10 LYS 1007 -0.49 GLY 1051
LYS 1045 0.16 ARG 1008 -0.57 GLY 1051
LYS 1045 0.16 ARG 1008 -0.56 GLY 1051
ILE 1047 0.14 PRO 1009 -0.52 GLY 1051
ILE 1047 0.23 LEU 1010 -0.52 GLY 1051
ILE 1047 0.23 VAL 1011 -0.44 GLY 1051
ILE 1047 0.26 THR 1012 -0.38 GLY 1051
ILE 1047 0.27 ILE 1013 -0.35 GLY 1051
ILE 1047 0.28 LYS 1014 -0.28 GLY 1051
ILE 1047 0.31 ILE 1015 -0.25 GLY 1051
GLY 1048 0.34 GLY 1016 -0.18 GLY 1051
GLY 1048 0.32 GLY 1017 -0.19 GLY 1051
GLY 1048 0.35 GLN 1018 -0.23 GLY 1051
GLY 1048 0.33 LEU 1019 -0.29 GLY 1051
GLY 1048 0.38 LYS 1020 -0.34 GLY 1051
ILE 1047 0.36 GLU 1021 -0.43 GLY 1051
ILE 1047 0.36 GLU 1021 -0.43 GLY 1051
ILE 1047 0.36 ALA 1022 -0.49 GLY 1051
ILE 1047 0.28 LEU 1023 -0.58 GLY 1051
ILE 1047 0.19 LEU 1024 -0.52 GLY 1051
THR 1080 0.19 ASP 1025 -0.59 GLY 1051
THR 1080 0.12 THR 1026 -0.51 GLY 1051
ALA 1028 0.25 GLY 1027 -0.65 GLY 1051
VAL 1082 0.34 ALA 1028 -0.62 ILE 1050
VAL 1082 0.28 ASP 1029 -0.55 ILE 1050
VAL 1082 0.34 ASP 1030 -0.44 GLY 1051
THR 1080 0.35 THR 1031 -0.43 GLY 1051
THR 1080 0.45 VAL 1032 -0.42 GLY 1051
THR 1080 0.46 VAL 1032 -0.42 GLY 1051
GLY 1048 0.49 LEU 1033 -0.37 GLY 1051
GLY 1048 0.61 GLU 1034 -0.32 GLY 1051
GLY 1048 0.58 GLU 1035 -0.18 GLY 1051
GLY 1048 0.49 MET 1036 -0.16 GLY 1051
GLY 1048 0.49 MET 1036 -0.17 GLY 1051
GLY 1048 0.42 ASN 1037 -0.11 GLY 1051
ILE 1054 0.37 LEU 1038 -0.12 GLY 1051
ILE 1054 0.33 PRO 1039 -0.08 HIS 1069
ILE 1054 0.31 GLY 1040 -0.08 LEU 1063
PRO 1079 0.33 ARG 1041 -0.06 LEU 1063
PRO 1079 0.38 TRP 1042 -0.05 LEU 1063
PRO 1079 0.41 LYS 1043 -0.03 ILE 1064
PRO 1079 0.47 PRO 1044 -0.04 VAL 1056
PRO 1081 0.49 LYS 1045 -0.04 PRO 1081
PRO 1081 0.56 MET 1046 -0.14 GLY 1051
PRO 1081 0.70 ILE 1047 -0.25 GLY 1051
PRO 1081 0.85 GLY 1048 -0.47 GLY 1051
PRO 1079 0.62 GLY 1049 -0.72 GLY 1051
PRO 1079 0.74 ILE 1050 -0.97 GLY 1051
PRO 1079 0.49 GLY 1051 -1.16 GLY 1051
PRO 1079 0.50 GLY 1052 -0.74 GLY 1051
PRO 1079 0.64 PHE 1053 -0.38 PRO 1081
PRO 1079 0.71 ILE 1054 -0.21 PRO 1081
PRO 1079 0.61 LYS 1055 -0.08 PRO 1081
PRO 1079 0.55 VAL 1056 -0.06 GLY 1051
PRO 1079 0.47 ARG 1057 -0.04 ILE 1064
THR 1080 0.41 GLN 1058 -0.09 GLY 1051
PRO 1079 0.34 TYR 1059 -0.11 GLY 1051
THR 1080 0.28 ASP 1060 -0.13 GLY 1051
THR 1080 0.23 GLN 1061 -0.16 GLY 1051
ILE 1054 0.26 ILE 1062 -0.19 GLY 1051
ILE 1047 0.23 LEU 1063 -0.22 GLY 1051
ILE 1047 0.24 ILE 1064 -0.27 GLY 1051
ILE 1047 0.24 ILE 1064 -0.27 GLY 1051
ILE 1047 0.22 GLU 1065 -0.29 GLY 1051
ILE 1047 0.21 ILE 1066 -0.34 GLY 1051
ILE 1047 0.19 CYS 1067 -0.34 GLY 1051
ILE 1047 0.17 GLY 1068 -0.29 GLY 1051
ILE 1047 0.16 HIS 1069 -0.28 GLY 1051
ILE 1047 0.18 LYS 1070 -0.26 GLY 1051
ILE 1047 0.17 ALA 1071 -0.26 GLY 1051
ILE 1047 0.19 ILE 1072 -0.23 GLY 1051
THR 1080 0.22 GLY 1073 -0.23 GLY 1051
THR 1080 0.28 THR 1074 -0.22 GLY 1051
THR 1080 0.34 VAL 1075 -0.26 GLY 1051
THR 1080 0.43 LEU 1076 -0.23 GLY 1051
ILE 1054 0.48 VAL 1077 -0.20 GLY 1051
GLY 1048 0.59 GLY 1078 -0.18 GLY 1051
GLY 1048 0.75 PRO 1079 -0.24 GLY 1051
GLY 1048 0.76 THR 1080 -0.50 GLY 1051
GLY 1048 0.85 PRO 1081 -0.76 GLY 1051
GLY 1048 0.65 VAL 1082 -0.66 GLY 1051
ILE 1047 0.48 ASN 1083 -0.53 GLY 1051
ILE 1047 0.38 ILE 1084 -0.57 GLY 1051
ILE 1047 0.38 ILE 1084 -0.57 GLY 1051
THR 1080 0.26 ILE 1085 -0.48 GLY 1051
THR 1080 0.25 GLY 1086 -0.50 GLY 1051
THR 1080 0.16 ARG 1087 -0.42 ILE 1050
THR 1080 0.18 ASN 1088 -0.36 ILE 1050
THR 1080 0.18 LEU 1089 -0.35 GLY 1051
THR 1080 0.13 LEU 1090 -0.38 GLY 1051
THR 1080 0.09 THR 1091 -0.32 GLY 1051
THR 1080 0.09 THR 1091 -0.33 GLY 1051
THR 1080 0.09 THR 1091 -0.33 GLY 1051
ILE 1047 0.11 GLN 1092 -0.29 GLY 1051
ILE 1047 0.11 ILE 1093 -0.31 GLY 1051
ILE 1047 0.07 GLY 1094 -0.30 GLY 1051
ILE 1047 0.06 CYS 1095 -0.34 GLY 1051
THR 1004 0.07 THR 1096 -0.34 GLY 1051
LYS 1045 0.05 LEU 1097 -0.37 GLY 1051
THR 1004 0.06 ASN 1098 -0.33 GLY 1051
PRO 1009 0.08 PHE 1099 -0.31 GLY 1051

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.