CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  CELL INVASION 16-SEP-16 5TCX  ***

<R2> analysis for 260209051925111772

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0818
SER 60.0133
THR 70.0386
LYS 80.0086
SER 90.0179
ILE 100.0067
LYS 110.0102
TYR 120.0331
LEU 130.0344
LEU 140.0292
PHE 150.0285
VAL 160.0355
PHE 170.0346
ASN 180.0228
PHE 190.0170
VAL 200.0132
PHE 210.0161
TRP 220.0079
LEU 230.0147
ALA 240.0281
GLY 250.0210
GLY 260.0111
VAL 270.0300
ILE 280.0148
LEU 290.0103
GLY 300.0022
VAL 310.0031
ALA 320.0093
LEU 330.0119
TRP 340.0123
LEU 350.0102
ARG 360.0120
HIS 370.0130
PRO 550.0294
ASN 560.0158
THR 570.0075
PHE 580.0071
TYR 590.0153
VAL 600.0221
GLY 610.0246
ILE 620.0172
TYR 630.0136
ILE 640.0157
LEU 650.0049
ILE 660.0046
ALA 670.0130
VAL 680.0157
GLY 690.0184
ALA 700.0193
VAL 710.0183
MET 720.0198
MET 730.0115
PHE 740.0082
VAL 750.0042
GLY 760.0043
PHE 770.0117
LEU 780.0148
GLY 790.0204
YCM 800.0197
TYR 810.0197
GLY 820.0211
ALA 830.0278
ILE 840.0172
GLN 850.0285
GLN 880.0487
YCM 890.0490
LEU 900.0284
LEU 910.0354
GLY 920.0350
THR 930.0304
PHE 940.0260
PHE 950.0175
THR 960.0096
CYS 970.0186
LEU 980.0214
VAL 990.0195
ILE 1000.0392
LEU 1010.0345
PHE 1020.0231
ALA 1030.0245
CYS 1040.0112
GLU 1050.0086
VAL 1060.0525
ALA 1070.0566
ALA 1080.0299
GLY 1090.0217
ILE 1100.0130
TRP 1110.0040
GLY 1120.0086
PHE 1130.0154
VAL 1140.0216
ASN 1150.0178
LYS 1160.0118
ASP 1170.0127
GLN 1180.0058
ILE 1190.0054
ALA 1200.0098
LYS 1210.0132
ASP 1220.0113
VAL 1230.0052
LYS 1240.0015
GLN 1250.0043
PHE 1260.0070
TYR 1270.0074
ASP 1280.0061
GLN 1290.0093
ALA 1300.0153
LEU 1310.0133
GLN 1320.0196
GLN 1330.0221
ALA 1340.0189
VAL 1350.0140
VAL 1360.0275
ASP 1370.0258
ASP 1380.0200
ASP 1390.0124
ALA 1400.0212
ASN 1410.0196
ASN 1420.0162
ALA 1430.0193
LYS 1440.0264
ALA 1450.0349
VAL 1460.0181
VAL 1470.0161
LYS 1480.0198
THR 1490.0223
PHE 1500.0222
HIS 1510.0137
GLU 1520.0240
THR 1530.0473
LEU 1540.0420
ASP 1550.0362
CYS 1560.0208
CYS 1570.0100
GLY 1580.0120
SER 1590.0113
SER 1600.0106
THR 1610.0129
LEU 1620.0144
THR 1630.0117
ALA 1640.0137
LEU 1650.0146
THR 1660.0144
THR 1670.0117
SER 1680.0232
VAL 1690.0287
LEU 1700.0187
LYS 1710.0180
ASN 1720.0277
ASN 1730.0341
LEU 1740.0193
CYS 1750.0144
PRO 1760.0241
SER 1770.0645
GLY 1780.0735
SER 1790.0254
ASN 1800.0267
ILE 1810.0194
ILE 1820.0174
SER 1830.0190
ASN 1840.0136
LEU 1850.0151
PHE 1860.0272
LYS 1870.0247
GLU 1880.0179
ASP 1890.0168
CYS 1900.0125
HIS 1910.0076
GLN 1920.0062
LYS 1930.0051
ILE 1940.0081
ASP 1950.0151
ASP 1960.0171
LEU 1970.0200
PHE 1980.0147
SER 1990.0192
GLY 2000.0292
LYS 2010.0223
LEU 2020.0150
TYR 2030.0250
LEU 2040.0102
ILE 2050.0174
GLY 2060.0091
ILE 2070.0200
ALA 2080.0441
ALA 2090.0501
ILE 2100.0342
VAL 2110.0353
VAL 2120.0276
ALA 2130.0157
VAL 2140.0137
ILE 2150.0279
MET 2160.0207
ILE 2170.0209
PHE 2180.0279
GLU 2190.0227
MET 2200.0210
ILE 2210.0322
LEU 2220.0153
SER 2230.0147
MET 2240.0240
VAL 2250.0279
LEU 2260.0154
SER 2270.0157
SER 2280.0265
GLY 2290.0258
ILE 2300.0296
ARG 2310.0144
ASN 2320.0818

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.