CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  2btf  ***

Normal Mode Analysis for ID 260209094051182416

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5245
mode 8 1.30 0.4308
mode 9 1.55 0.3564
mode 10 1.63 0.5234
mode 11 1.86 0.2911
mode 12 1.98 0.3546
mode 13 2.17 0.3813
mode 14 2.30 0.0517
mode 15 2.43 0.4439
mode 16 2.48 0.1344
mode 17 2.54 0.5961
mode 18 2.82 0.5978
mode 19 2.85 0.6568
mode 20 3.03 0.5254
mode 21 3.16 0.4920
mode 22 3.36 0.4093
mode 23 3.53 0.5070
mode 24 3.70 0.2446
mode 25 3.86 0.3144
mode 26 3.91 0.1994
mode 27 3.95 0.4840
mode 28 4.01 0.2290
mode 29 4.12 0.2076
mode 30 4.16 0.1923
mode 31 4.23 0.1240
mode 32 4.26 0.3005
mode 33 4.28 0.1749
mode 34 4.44 0.1809
mode 35 4.51 0.2397
mode 36 4.53 0.2420
mode 37 4.67 0.4611
mode 38 4.73 0.3668
mode 39 4.73 0.2810
mode 40 4.86 0.2758
mode 41 4.94 0.3487
mode 42 5.05 0.3986
mode 43 5.12 0.3891
mode 44 5.25 0.1920
mode 45 5.28 0.3111
mode 46 5.34 0.2518
mode 47 5.43 0.3591
mode 48 5.46 0.2724
mode 49 5.48 0.2554
mode 50 5.56 0.4033
mode 51 5.64 0.3820
mode 52 5.70 0.3532
mode 53 5.72 0.1564
mode 54 5.77 0.3211
mode 55 5.85 0.3992
mode 56 5.86 0.4641
mode 57 5.89 0.2652
mode 58 5.94 0.3930
mode 59 6.01 0.4657
mode 60 6.08 0.4102
mode 61 6.14 0.2834
mode 62 6.17 0.5185
mode 63 6.17 0.3517
mode 64 6.25 0.3948
mode 65 6.29 0.3734
mode 66 6.33 0.3521
mode 67 6.38 0.3464
mode 68 6.47 0.3309
mode 69 6.48 0.3468
mode 70 6.51 0.2521
mode 71 6.58 0.4099
mode 72 6.62 0.4818
mode 73 6.65 0.4573
mode 74 6.69 0.4580
mode 75 6.72 0.3840
mode 76 6.78 0.4464
mode 77 6.78 0.4689
mode 78 6.87 0.4329
mode 79 6.90 0.3818
mode 80 6.93 0.3064
mode 81 6.97 0.4517
mode 82 7.02 0.4694
mode 83 7.06 0.4960
mode 84 7.13 0.4820
mode 85 7.15 0.3764
mode 86 7.19 0.4492
mode 87 7.23 0.4402
mode 88 7.25 0.2420
mode 89 7.27 0.4451
mode 90 7.29 0.3915
mode 91 7.36 0.4269
mode 92 7.40 0.3060
mode 93 7.47 0.5576
mode 94 7.50 0.4641
mode 95 7.55 0.4724
mode 96 7.55 0.4988
mode 97 7.59 0.3761
mode 98 7.62 0.3987
mode 99 7.66 0.4348
mode 100 7.71 0.4780
mode 101 7.74 0.4688
mode 102 7.80 0.4822
mode 103 7.83 0.4581
mode 104 7.85 0.4016
mode 105 7.92 0.4697
mode 106 7.96 0.4773

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.