CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***    ***

CA strain for 260210124803446219

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 2ALA 3 -0.0097
ALA 3LYS 4 -0.0357
LYS 4LYS 5 0.1374
LYS 5ASP 6 -0.0886
ASP 6TYR 7 0.0412
TYR 7TYR 8 0.0492
TYR 8ALA 9 0.0114
ALA 9ILE 10 0.1806
ILE 10LEU 11 0.0108
LEU 11GLY 12 0.2066
GLY 12VAL 13 -0.0166
VAL 13PRO 14 -0.0964
PRO 14ARG 15 -0.2853
ARG 15ASN 16 0.0675
ASN 16ALA 17 -0.0618
ALA 17THR 18 0.0956
THR 18GLN 19 0.0185
GLN 19GLU 20 -0.0595
GLU 20GLU 21 0.0613
GLU 21ILE 22 0.0332
ILE 22LYS 23 -0.0423
LYS 23ARG 24 0.0724
ARG 24ALA 25 -0.0101
ALA 25TYR 26 0.0370
TYR 26LYS 27 -0.0133
LYS 27ARG 28 0.1748
ARG 28LEU 29 -0.0687
LEU 29ALA 30 -0.2223
ALA 30ARG 31 0.2569
ARG 31GLN 32 0.0019
GLN 32TYR 33 0.0278
TYR 33HIS 34 -0.0159
HIS 34PRO 35 -0.1843
PRO 35ASP 36 0.0916
ASP 36VAL 37 -0.1031
VAL 37ASN 38 -0.0013
ASN 38LYS 39 -0.0594
LYS 39SER 40 -0.0226
SER 40PRO 41 0.0219
PRO 41GLU 42 0.0355
GLU 42ALA 43 -0.0167
ALA 43GLU 44 0.0508
GLU 44GLU 45 0.1208
GLU 45LYS 46 -0.0291
LYS 46PHE 47 -0.0321
PHE 47LYS 48 0.3838
LYS 48GLU 49 0.2128
GLU 49ILE 50 -0.1561
ILE 50ASN 51 0.0671
ASN 51GLU 52 0.3660
GLU 52ALA 53 -0.0247
ALA 53TYR 54 -0.0006
TYR 54ALA 55 0.1328
ALA 55VAL 56 0.0351
VAL 56LEU 57 -0.0028
LEU 57SER 58 0.0089
SER 58ASP 59 0.0840
ASP 59PRO 60 -0.0248
PRO 60GLU 61 -0.1042
GLU 61LYS 62 -0.0225
LYS 62ARG 63 -0.1221
ARG 63ARG 64 -0.0294
ARG 64ILE 65 -0.0561
ILE 65TYR 66 -0.0949
TYR 66ASP 67 -0.0104
ASP 67THR 68 -0.2365
THR 68TYR 69 0.0911
TYR 69GLY 70 -0.0098
GLY 70THR 71 0.1271
THR 71THR 72 -0.0438
THR 72GLU 73 -0.0186
GLU 73ALA 74 -0.0122
ALA 74PRO 75 0.1127
PRO 75PRO 76 -0.1184
PRO 76PRO 77 -0.0626
PRO 77PRO 78 0.1263
PRO 78PRO 79 -0.0291
PRO 79PRO 80 -0.1727
PRO 80GLY 81 0.0835
GLY 81GLY 82 0.1182
GLY 82TYR 83 0.0832
TYR 83ASP 84 0.0652
ASP 84PHE 85 0.2071
PHE 85SER 86 -0.1046
SER 86GLY 87 0.0134
GLY 87PHE 88 -0.0569
PHE 88ASP 89 0.0767
ASP 89VAL 90 -0.0206
VAL 90GLU 91 -0.0114
GLU 91ASP 92 -0.0086
ASP 92PHE 93 0.0002
PHE 93SER 94 -0.0143
SER 94GLU 95 0.0808
GLU 95PHE 96 -0.0264
PHE 96PHE 97 -0.0293
PHE 97GLN 98 -0.0359
GLN 98GLU 99 0.0186
GLU 99LEU 100 -0.0129
LEU 100PHE 101 0.0026

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.