CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 18-AUG-21 7PHT  ***

Normal Mode Analysis for ID 260210202843550410

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6546
mode 8 1.20 0.5844
mode 9 1.59 0.5605
mode 10 2.45 0.6237
mode 11 2.71 0.6454
mode 12 3.21 0.5089
mode 13 3.28 0.5946
mode 14 4.22 0.0700
mode 15 4.23 0.5392
mode 16 4.45 0.3832
mode 17 4.76 0.0308
mode 18 5.05 0.6356
mode 19 5.16 0.0075
mode 20 5.28 0.0063
mode 21 5.45 0.0586
mode 22 5.51 0.0290
mode 23 5.58 0.2355
mode 24 5.64 0.0080
mode 25 5.74 0.0090
mode 26 5.80 0.0486
mode 27 5.85 0.0081
mode 28 5.92 0.0330
mode 29 5.96 0.0301
mode 30 6.00 0.0143
mode 31 6.05 0.1234
mode 32 6.09 0.0391
mode 33 6.17 0.0189
mode 34 6.20 0.0124
mode 35 6.24 0.0184
mode 36 6.25 0.0243
mode 37 6.33 0.0119
mode 38 6.42 0.0196
mode 39 6.44 0.0103
mode 40 6.52 0.0183
mode 41 6.54 0.0166
mode 42 6.61 0.0180
mode 43 6.72 0.0922
mode 44 6.77 0.0500
mode 45 6.86 0.2376
mode 46 6.94 0.0170
mode 47 6.98 0.0086
mode 48 7.01 0.0163
mode 49 7.07 0.0173
mode 50 7.11 0.0549
mode 51 7.12 0.0298
mode 52 7.17 0.0455
mode 53 7.20 0.1114
mode 54 7.21 0.0369
mode 55 7.24 0.0202
mode 56 7.27 0.0592
mode 57 7.30 0.0477
mode 58 7.37 0.0655
mode 59 7.40 0.0463
mode 60 7.41 0.0193
mode 61 7.43 0.0371
mode 62 7.44 0.0277
mode 63 7.45 0.0111
mode 64 7.47 0.0202
mode 65 7.48 0.0337
mode 66 7.50 0.0866
mode 67 7.51 0.0429
mode 68 7.52 0.0202
mode 69 7.60 0.0228
mode 70 7.61 0.0233
mode 71 7.66 0.0090
mode 72 7.67 0.1758
mode 73 7.75 0.0074
mode 74 7.76 0.0121
mode 75 7.78 0.0551
mode 76 7.81 0.0309
mode 77 7.86 0.0166
mode 78 7.89 0.0572
mode 79 7.92 0.0182
mode 80 7.97 0.1137
mode 81 8.01 0.0849
mode 82 8.02 0.0342
mode 83 8.04 0.0348
mode 84 8.05 0.0195
mode 85 8.06 0.0367
mode 86 8.12 0.0477
mode 87 8.14 0.0235
mode 88 8.16 0.0284
mode 89 8.23 0.0203
mode 90 8.24 0.0361
mode 91 8.27 0.0249
mode 92 8.29 0.0393
mode 93 8.31 0.0486
mode 94 8.34 0.0368
mode 95 8.39 0.0304
mode 96 8.48 0.0152
mode 97 8.52 0.0266
mode 98 8.53 0.0089
mode 99 8.55 0.0115
mode 100 8.55 0.0353
mode 101 8.56 0.0490
mode 102 8.61 0.0278
mode 103 8.64 0.0836
mode 104 8.65 0.0447
mode 105 8.68 0.0426
mode 106 8.68 0.0204

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.