CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  Y_modelo_12_KELEY  ***

Normal Mode Analysis for ID 260211175519973776

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.7505
mode 8 1.14 0.7358
mode 9 1.37 0.7667
mode 10 2.50 0.8058
mode 11 2.56 0.7632
mode 12 2.97 0.7926
mode 13 3.94 0.5157
mode 14 3.96 0.4688
mode 15 4.23 0.3223
mode 16 4.25 0.3256
mode 17 4.60 0.2275
mode 18 4.67 0.2281
mode 19 4.93 0.4106
mode 20 5.00 0.3144
mode 21 5.08 0.4160
mode 22 5.18 0.3270
mode 23 5.34 0.3047
mode 24 5.38 0.3719
mode 25 5.43 0.1053
mode 26 5.49 0.1100
mode 27 5.68 0.1296
mode 28 5.71 0.1182
mode 29 5.82 0.2662
mode 30 5.83 0.3505
mode 31 5.89 0.2637
mode 32 5.90 0.2464
mode 33 6.12 0.3403
mode 34 6.18 0.3619
mode 35 6.29 0.4045
mode 36 6.33 0.2915
mode 37 6.37 0.3736
mode 38 6.45 0.6221
mode 39 6.63 0.5576
mode 40 6.71 0.5643
mode 41 6.77 0.5212
mode 42 6.82 0.6644
mode 43 7.01 0.6906
mode 44 7.03 0.6362
mode 45 7.10 0.5434
mode 46 7.13 0.3791
mode 47 7.25 0.4241
mode 48 7.31 0.4912
mode 49 7.47 0.3788
mode 50 7.66 0.4922
mode 51 7.72 0.3748
mode 52 7.76 0.3611
mode 53 7.78 0.2099
mode 54 7.82 0.3376
mode 55 7.86 0.2231
mode 56 7.89 0.2849
mode 57 7.95 0.2801
mode 58 8.07 0.3766
mode 59 8.14 0.4785
mode 60 8.23 0.2907
mode 61 8.25 0.4648
mode 62 8.28 0.4478
mode 63 8.32 0.3397
mode 64 8.46 0.4034
mode 65 8.51 0.3783
mode 66 8.57 0.4566
mode 67 8.58 0.3828
mode 68 8.64 0.3853
mode 69 8.70 0.3737
mode 70 8.78 0.2791
mode 71 8.79 0.3379
mode 72 8.89 0.3392
mode 73 8.90 0.4241
mode 74 8.93 0.3894
mode 75 9.00 0.3494
mode 76 9.03 0.2011
mode 77 9.04 0.3663
mode 78 9.11 0.3441
mode 79 9.16 0.5234
mode 80 9.20 0.2743
mode 81 9.22 0.2337
mode 82 9.26 0.3861
mode 83 9.31 0.4460
mode 84 9.33 0.2948
mode 85 9.34 0.4918
mode 86 9.40 0.3683
mode 87 9.43 0.4463
mode 88 9.50 0.3697
mode 89 9.51 0.4455
mode 90 9.52 0.4726
mode 91 9.57 0.4646
mode 92 9.71 0.5124
mode 93 9.72 0.4314
mode 94 9.88 0.5362
mode 95 9.89 0.5036
mode 96 9.94 0.5745
mode 97 9.98 0.4825
mode 98 10.11 0.5659
mode 99 10.13 0.4543
mode 100 10.24 0.3225
mode 101 10.35 0.2911
mode 102 10.36 0.3494
mode 103 10.42 0.3905
mode 104 10.43 0.2962
mode 105 10.46 0.3515
mode 106 10.50 0.3946

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.