CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HYDROLASE 10-FEB-15 4Y4D  ***

<R2> analysis for 2602120905571230321

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0703
SER 10.0152
SER 10.0152
THR 20.0110
GLY 30.0092
SER 40.0081
ALA 50.0082
THR 60.0139
THR 70.0151
THR 80.0166
PRO 90.0108
ILE 100.0116
ASP 110.0126
SER 120.0223
LEU 130.0112
ASP 140.0050
ASP 150.0125
ALA 160.0165
TYR 170.0130
ILE 180.0143
THR 190.0098
PRO 200.0087
VAL 210.0053
GLN 220.0076
ILE 230.0063
GLY 240.0059
THR 250.0058
PRO 260.0063
ALA 270.0079
GLN 280.0106
THR 290.0042
LEU 300.0046
ASN 310.0054
LEU 320.0050
ASP 330.0079
PHE 340.0078
ASP 350.0066
THR 360.0067
GLY 370.0110
SER 380.0100
SER 390.0079
ASP 400.0066
LEU 410.0040
TRP 420.0041
VAL 430.0059
PHE 440.0061
SER 450.0117
SER 460.0115
GLU 470.0096
THR 480.0097
THR 490.0117
ALA 500.0172
SER 510.0119
GLU 520.0110
VAL 530.0110
ASP 540.0081
ASP 540.0081
GLY 550.0047
GLN 560.0047
THR 570.0052
ILE 580.0077
TYR 590.0143
THR 600.0129
PRO 610.0093
SER 620.0203
LYS 630.0261
SER 640.0114
THR 650.0222
THR 660.0093
ALA 670.0031
LYS 680.0042
LEU 690.0070
LEU 700.0094
SER 710.0290
GLY 720.0137
ALA 730.0132
THR 740.0126
TRP 750.0092
SER 760.0087
ILE 770.0061
SER 780.0064
SER 780.0064
TYR 790.0086
GLY 800.0166
ASP 810.0135
GLY 820.0118
SER 830.0038
SER 840.0034
SER 850.0055
SER 860.0059
GLY 870.0089
ASP 880.0089
VAL 890.0106
TYR 900.0099
THR 910.0098
ASP 920.0083
THR 930.0086
VAL 940.0065
SER 950.0093
VAL 960.0072
GLY 970.0089
GLY 980.0140
LEU 990.0120
THR 1000.0132
VAL 1010.0116
THR 1020.0173
GLY 1030.0134
GLN 1040.0078
ALA 1050.0092
VAL 1060.0089
GLU 1070.0090
SER 1080.0080
ALA 1090.0082
LYS 1100.0066
LYS 1110.0042
VAL 1120.0049
SER 1130.0040
SER 1140.0092
SER 1150.0084
SER 1150.0083
PHE 1160.0037
THR 1170.0081
GLU 1180.0079
ASP 1190.0051
SER 1200.0062
THR 1210.0067
ILE 1220.0055
ASP 1230.0012
GLY 1240.0018
LEU 1250.0054
LEU 1260.0054
GLY 1270.0068
LEU 1280.0074
ALA 1290.0076
PHE 1300.0068
SER 1310.0151
THR 1320.0230
LEU 1330.0177
ASN 1340.0106
THR 1350.0098
VAL 1360.0107
SER 1370.0172
PRO 1380.0161
THR 1390.0174
GLN 1400.0145
GLN 1410.0079
LYS 1420.0086
THR 1430.0089
PHE 1440.0064
PHE 1450.0101
ASP 1460.0131
ASP 1460.0131
ASN 1470.0086
ALA 1480.0100
LYS 1490.0143
ALA 1500.0169
SER 1510.0133
SER 1510.0132
LEU 1520.0130
ASP 1530.0132
SER 1540.0135
PRO 1550.0095
VAL 1560.0052
PHE 1570.0025
THR 1580.0017
ALA 1590.0074
ASP 1600.0080
LEU 1610.0155
GLY 1620.0144
TYR 1630.0224
HIS 1640.0173
ALA 1650.0153
PRO 1660.0230
GLY 1670.0162
THR 1680.0097
TYR 1690.0053
ASN 1700.0051
PHE 1710.0069
GLY 1720.0089
PHE 1730.0028
ILE 1740.0046
ASP 1750.0043
THR 1760.0037
THR 1770.0111
ALA 1780.0057
TYR 1790.0093
THR 1800.0076
GLY 1810.0085
SER 1820.0110
SER 1820.0110
ILE 1830.0103
THR 1840.0130
TYR 1850.0117
THR 1860.0123
ALA 1870.0097
VAL 1880.0090
SER 1890.0046
THR 1900.0091
LYS 1910.0188
GLN 1920.0221
GLY 1930.0129
PHE 1940.0123
TRP 1950.0061
GLU 1960.0057
TRP 1970.0071
THR 1980.0055
SER 1990.0094
THR 2000.0087
GLY 2010.0073
TYR 2020.0064
ALA 2030.0067
VAL 2040.0065
GLY 2050.0063
SER 2060.0245
SER 2060.0245
GLY 2070.0412
THR 2080.0170
THR 2080.0175
PHE 2090.0094
LYS 2100.0172
SER 2110.0198
THR 2120.0147
SER 2130.0062
ILE 2140.0068
ASP 2150.0072
ASP 2150.0072
GLY 2160.0091
ILE 2170.0088
ALA 2180.0100
ASP 2190.0059
THR 2200.0063
GLY 2210.0085
THR 2220.0072
THR 2230.0114
LEU 2240.0071
LEU 2250.0018
TYR 2260.0011
LEU 2270.0053
PRO 2280.0120
ALA 2290.0165
THR 2300.0139
VAL 2310.0060
VAL 2320.0034
SER 2330.0044
ALA 2340.0097
TYR 2350.0071
TRP 2360.0064
ALA 2370.0101
GLN 2380.0172
VAL 2390.0178
SER 2400.0324
SER 2400.0325
GLY 2410.0273
ALA 2420.0145
LYS 2430.0167
SER 2440.0144
SER 2450.0124
SER 2460.0167
SER 2470.0228
VAL 2480.0077
GLY 2490.0181
GLY 2500.0163
TYR 2510.0096
VAL 2520.0091
PHE 2530.0066
PRO 2540.0039
CYS 2550.0147
SER 2560.0193
ALA 2570.0012
THR 2580.0283
LEU 2590.0075
PRO 2600.0053
SER 2610.0036
PHE 2620.0019
THR 2630.0033
PHE 2640.0036
GLY 2650.0073
VAL 2660.0123
GLY 2670.0198
SER 2680.0201
ALA 2690.0108
ARG 2700.0024
ILE 2710.0093
VAL 2720.0111
ILE 2730.0144
PRO 2740.0157
GLY 2750.0135
ASP 2760.0200
ASP 2760.0201
TYR 2770.0154
ILE 2780.0086
ASP 2790.0058
PHE 2800.0020
GLY 2810.0117
PRO 2820.0137
ILE 2830.0129
SER 2840.0140
THR 2850.0117
GLY 2860.0262
SER 2870.0278
SER 2880.0315
SER 2890.0112
SER 2890.0112
CYS 2900.0062
PHE 2910.0067
GLY 2920.0062
GLY 2930.0071
ILE 2940.0056
GLN 2950.0107
SER 2960.0109
SER 2970.0100
ALA 2980.0480
ALA 2980.0490
GLY 2990.0167
GLY 2990.0159
ILE 3000.0342
GLY 3010.0703
ILE 3020.0323
ASN 3030.0095
ILE 3040.0090
PHE 3050.0038
GLY 3060.0040
ASP 3070.0122
VAL 3080.0108
ALA 3090.0107
LEU 3100.0103
LYS 3110.0188
LYS 3110.0188
ALA 3120.0198
ALA 3130.0144
PHE 3140.0113
VAL 3150.0073
VAL 3160.0078
PHE 3170.0034
ASN 3180.0042
GLY 3190.0070
ALA 3200.0154
THR 3210.0231
THR 3220.0368
PRO 3230.0082
PRO 3230.0082
THR 3240.0093
LEU 3250.0093
LEU 3250.0093
GLY 3260.0097
PHE 3270.0110
ALA 3280.0101
SER 3290.0134
SER 3290.0135
LYS 3300.0139

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.