CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SUGAR BINDING PROTEIN 10-JUL-21 7RDP  ***

CA strain for 2602120908101231422

---  normal mode 21  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 112PRO 113 -0.1976
PRO 113LEU 114 -0.3772
LEU 114ILE 115 -0.0471
ILE 115VAL 116 0.2752
VAL 116PRO 117 0.0280
PRO 117TYR 118 0.1715
TYR 118ASN 119 -0.1731
ASN 119LEU 120 -0.2937
LEU 120PRO 121 0.3004
PRO 121LEU 122 -0.0437
LEU 122PRO 123 0.1009
PRO 123GLY 124 0.2892
GLY 124GLY 125 -0.0573
GLY 125VAL 126 0.0248
VAL 126VAL 127 -0.2782
VAL 127PRO 128 0.0887
PRO 128ARG 129 0.0465
ARG 129MET 130 -0.4627
MET 130LEU 131 0.2750
LEU 131ILE 132 -0.4733
ILE 132THR 133 0.0893
THR 133ILE 134 -0.0669
ILE 134LEU 135 0.0042
LEU 135GLY 136 0.0224
GLY 136THR 137 0.0339
THR 137VAL 138 0.0036
VAL 138LYS 139 0.0780
LYS 139PRO 140 0.1745
PRO 140ASN 141 -0.0691
ASN 141ALA 142 -0.1274
ALA 142ASN 143 -0.1207
ASN 143ASN 143 0.0288
ASN 143ARG 144 0.1302
ARG 144ILE 145 0.0930
ILE 145ALA 146 0.2095
ALA 146LEU 147 0.1734
LEU 147ASP 148 0.1277
ASP 148PHE 149 0.2197
PHE 149GLN 150 -0.0485
GLN 150ARG 151 0.0347
ARG 151GLY 152 0.3370
GLY 152ASN 153 0.0004
ASN 153ASP 154 0.2664
ASP 154VAL 155 -0.0106
VAL 155ALA 156 0.1382
ALA 156PHE 157 0.1996
PHE 157HIS 158 0.1638
HIS 158PHE 159 0.3410
PHE 159ASN 160 0.0907
ASN 160PRO 161 0.2176
PRO 161ARG 162 0.0686
ARG 162PHE 163 0.0467
PHE 163ASN 164 0.1430
ASN 164GLU 165 0.0607
GLU 165ASN 166 -0.0488
ASN 166ASN 166 0.0332
ASN 166ASN 167 -0.0126
ASN 167ARG 168 0.1584
ARG 168ARG 169 0.3170
ARG 169VAL 170 0.2853
VAL 170ILE 171 0.1483
ILE 171VAL 172 0.2177
VAL 172CYS 173 0.1576
CYS 173ASN 174 0.3518
ASN 174THR 175 0.2308
THR 175LYS 176 0.1365
LYS 176LEU 177 0.1771
LEU 177ASP 178 0.2288
ASP 178ASN 179 -0.0212
ASN 179ASN 180 0.0493
ASN 180TRP 181 0.4272
TRP 181GLY 182 -0.1471
GLY 182ARG 183 0.1920
ARG 183GLU 184 0.0264
GLU 184GLU 185 0.1768
GLU 185ARG 186 0.1906
ARG 186GLN 187 0.0750
GLN 187SER 188 0.1452
SER 188VAL 189 0.0554
VAL 189PHE 190 0.0599
PHE 190PRO 191 -0.1113
PRO 191PHE 192 0.0739
PHE 192GLU 193 0.0985
GLU 193GLU 193 -0.0922
GLU 193SER 194 -0.2320
SER 194GLY 195 0.0965
GLY 195LYS 196 -0.0544
LYS 196PRO 197 0.0374
PRO 197PHE 198 0.0445
PHE 198LYS 199 0.1615
LYS 199ILE 200 -0.0193
ILE 200GLN 201 0.0345
GLN 201VAL 202 0.2073
VAL 202LEU 203 -0.2064
LEU 203VAL 204 0.3353
VAL 204GLU 205 -0.1874
GLU 205PRO 206 0.0515
PRO 206ASP 207 -0.0205
ASP 207HIS 208 -0.0277
HIS 208PHE 209 -0.0912
PHE 209LYS 210 0.1404
LYS 210VAL 211 0.1558
VAL 211ALA 212 0.0742
ALA 212VAL 213 0.2608
VAL 213ASN 214 -0.0136
ASN 214ASP 215 -0.1160
ASP 215ALA 216 -0.1028
ALA 216HIS 217 0.1471
HIS 217LEU 218 0.0058
LEU 218LEU 219 0.1595
LEU 219GLN 220 0.1803
GLN 220TYR 221 -0.0170
TYR 221ASN 222 0.0275
ASN 222ASN 222 0.0208
ASN 222HIS 223 -0.0538
HIS 223ARG 224 0.0139
ARG 224VAL 225 -0.1085
VAL 225LYS 226 -0.1220
LYS 226LYS 227 -0.0450
LYS 227LEU 228 0.5777
LEU 228ASN 229 -0.1515
ASN 229GLU 230 0.1348
GLU 230ILE 231 0.1609
ILE 231SER 232 -0.0831
SER 232SER 232 0.0080
SER 232LYS 233 0.1130
LYS 233LEU 234 0.2702
LEU 234GLY 235 0.0877
GLY 235ILE 236 -0.0687
ILE 236SER 237 0.2700
SER 237GLY 238 0.1241
GLY 238ASP 239 0.2439
ASP 239ILE 240 0.1295
ILE 240ASP 241 -0.1348
ASP 241LEU 242 0.0804
LEU 242THR 243 -0.0201
THR 243SER 244 -0.0937
SER 244SER 244 -0.0054
SER 244ALA 245 0.1981
ALA 245SER 246 -0.5511
SER 246TYR 247 -0.3977
TYR 247THR 248 -0.2753
THR 248MET 249 -0.0661
MET 249MET 249 -0.0075
MET 249ILE 250 0.0108

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.