CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SUGAR BINDING PROTEIN 10-JUL-21 7RDP  ***

<R2> analysis for 2602120908101231422

---  normal mode 39  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0661
GLY 1120.0192
PRO 1130.0489
LEU 1140.0348
ILE 1150.0331
VAL 1160.0237
PRO 1170.0259
TYR 1180.0232
ASN 1190.0052
LEU 1200.0161
PRO 1210.0366
LEU 1220.0406
PRO 1230.0661
GLY 1240.0503
GLY 1250.0385
VAL 1260.0341
VAL 1270.0127
PRO 1280.0241
ARG 1290.0294
MET 1300.0055
LEU 1310.0119
ILE 1320.0155
THR 1330.0191
ILE 1340.0136
LEU 1350.0160
GLY 1360.0117
THR 1370.0154
VAL 1380.0207
LYS 1390.0222
PRO 1400.0265
ASN 1410.0321
ALA 1420.0215
ASN 1430.0145
ASN 1430.0146
ARG 1440.0118
ILE 1450.0103
ALA 1460.0113
LEU 1470.0080
ASP 1480.0118
PHE 1490.0139
GLN 1500.0175
ARG 1510.0240
GLY 1520.0139
ASN 1530.0265
ASP 1540.0233
VAL 1550.0178
ALA 1560.0154
PHE 1570.0052
HIS 1580.0067
PHE 1590.0096
ASN 1600.0186
PRO 1610.0192
ARG 1620.0201
PHE 1630.0167
ASN 1640.0331
GLU 1650.0280
ASN 1660.0331
ASN 1660.0326
ASN 1670.0486
ARG 1680.0462
ARG 1690.0294
VAL 1700.0266
ILE 1710.0225
VAL 1720.0176
CYS 1730.0174
ASN 1740.0192
THR 1750.0174
LYS 1760.0223
LEU 1770.0258
ASP 1780.0380
ASN 1790.0327
ASN 1800.0196
TRP 1810.0171
GLY 1820.0244
ARG 1830.0292
GLU 1840.0268
GLU 1850.0238
ARG 1860.0109
GLN 1870.0146
SER 1880.0293
VAL 1890.0349
PHE 1900.0390
PRO 1910.0376
PHE 1920.0251
GLU 1930.0076
GLU 1930.0076
SER 1940.0183
GLY 1950.0254
LYS 1960.0249
PRO 1970.0235
PHE 1980.0231
LYS 1990.0205
ILE 2000.0073
GLN 2010.0074
VAL 2020.0081
LEU 2030.0159
VAL 2040.0106
GLU 2050.0252
PRO 2060.0251
ASP 2070.0390
HIS 2080.0251
PHE 2090.0179
LYS 2100.0211
VAL 2110.0072
ALA 2120.0121
VAL 2130.0232
ASN 2140.0290
ASP 2150.0253
ALA 2160.0500
HIS 2170.0344
LEU 2180.0298
LEU 2190.0223
GLN 2200.0311
TYR 2210.0223
ASN 2220.0240
ASN 2220.0240
HIS 2230.0212
ARG 2240.0083
VAL 2250.0276
LYS 2260.0393
LYS 2270.0250
LEU 2280.0311
ASN 2290.0331
GLU 2300.0178
ILE 2310.0261
SER 2320.0289
SER 2320.0286
LYS 2330.0169
LEU 2340.0170
GLY 2350.0154
ILE 2360.0168
SER 2370.0109
GLY 2380.0114
ASP 2390.0200
ILE 2400.0142
ASP 2410.0192
LEU 2420.0334
THR 2430.0301
SER 2440.0238
SER 2440.0236
ALA 2450.0218
SER 2460.0290
TYR 2470.0344
THR 2480.0174
MET 2490.0128
MET 2490.0127
ILE 2500.0353

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.