CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HYDROLASE 10-FEB-15 4Y4D  ***

<R2> analysis for 2602120909361234529

---  normal mode 11  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1041
SER 10.0207
SER 10.0207
THR 20.0184
GLY 30.0147
SER 40.0143
ALA 50.0102
THR 60.0100
THR 70.0061
THR 80.0066
PRO 90.0049
ILE 100.0050
ASP 110.0047
SER 120.0060
LEU 130.0070
ASP 140.0064
ASP 150.0051
ALA 160.0039
TYR 170.0036
ILE 180.0053
THR 190.0079
PRO 200.0082
VAL 210.0076
GLN 220.0066
ILE 230.0036
GLY 240.0044
THR 250.0080
PRO 260.0103
ALA 270.0067
GLN 280.0084
THR 290.0065
LEU 300.0071
ASN 310.0071
LEU 320.0067
ASP 330.0059
PHE 340.0061
ASP 350.0052
THR 360.0043
GLY 370.0040
SER 380.0059
SER 390.0066
ASP 400.0065
LEU 410.0056
TRP 420.0038
VAL 430.0037
PHE 440.0060
SER 450.0074
SER 460.0109
GLU 470.0094
THR 480.0080
THR 490.0110
ALA 500.0160
SER 510.0178
GLU 520.0143
VAL 530.0139
ASP 540.0174
ASP 540.0174
GLY 550.0146
GLN 560.0106
THR 570.0105
ILE 580.0087
TYR 590.0077
THR 600.0105
PRO 610.0104
SER 620.0156
LYS 630.0155
SER 640.0114
THR 650.0131
THR 660.0098
ALA 670.0100
LYS 680.0124
LEU 690.0122
LEU 700.0122
SER 710.0166
GLY 720.0155
ALA 730.0115
THR 740.0089
TRP 750.0074
SER 760.0072
ILE 770.0097
SER 780.0128
SER 780.0128
TYR 790.0149
GLY 800.0182
ASP 810.0204
GLY 820.0182
SER 830.0142
SER 840.0101
SER 850.0060
SER 860.0035
GLY 870.0036
ASP 880.0068
VAL 890.0069
TYR 900.0077
THR 910.0072
ASP 920.0049
THR 930.0031
VAL 940.0051
SER 950.0087
VAL 960.0102
GLY 970.0135
GLY 980.0152
LEU 990.0142
THR 1000.0116
VAL 1010.0090
THR 1020.0066
GLY 1030.0065
GLN 1040.0053
ALA 1050.0054
VAL 1060.0030
GLU 1070.0030
SER 1080.0033
ALA 1090.0029
LYS 1100.0045
LYS 1110.0049
VAL 1120.0081
SER 1130.0116
SER 1140.0166
SER 1150.0176
SER 1150.0176
PHE 1160.0137
THR 1170.0153
GLU 1180.0195
ASP 1190.0145
SER 1200.0128
THR 1210.0070
ILE 1220.0073
ASP 1230.0067
GLY 1240.0059
LEU 1250.0061
LEU 1260.0066
GLY 1270.0061
LEU 1280.0064
ALA 1290.0056
PHE 1300.0060
SER 1310.0075
THR 1320.0065
LEU 1330.0065
ASN 1340.0066
THR 1350.0098
VAL 1360.0090
SER 1370.0132
PRO 1380.0163
THR 1390.0112
GLN 1400.0096
GLN 1410.0080
LYS 1420.0077
THR 1430.0074
PHE 1440.0082
PHE 1450.0094
ASP 1460.0095
ASP 1460.0096
ASN 1470.0104
ALA 1480.0124
LYS 1490.0148
ALA 1500.0185
SER 1510.0194
SER 1510.0194
LEU 1520.0180
ASP 1530.0198
SER 1540.0160
PRO 1550.0133
VAL 1560.0103
PHE 1570.0085
THR 1580.0075
ALA 1590.0045
ASP 1600.0057
LEU 1610.0030
GLY 1620.0041
TYR 1630.0046
HIS 1640.0053
ALA 1650.0061
PRO 1660.0060
GLY 1670.0083
THR 1680.0080
TYR 1690.0089
ASN 1700.0108
PHE 1710.0128
GLY 1720.0147
PHE 1730.0138
ILE 1740.0108
ASP 1750.0126
THR 1760.0108
THR 1770.0150
ALA 1780.0126
TYR 1790.0108
THR 1800.0124
GLY 1810.0114
SER 1820.0074
SER 1820.0074
ILE 1830.0045
THR 1840.0053
TYR 1850.0035
THR 1860.0058
ALA 1870.0065
VAL 1880.0058
SER 1890.0056
THR 1900.0056
LYS 1910.0045
GLN 1920.0023
GLY 1930.0032
PHE 1940.0023
TRP 1950.0020
GLU 1960.0025
TRP 1970.0054
THR 1980.0079
SER 1990.0093
THR 2000.0126
GLY 2010.0125
TYR 2020.0116
ALA 2030.0127
VAL 2040.0097
GLY 2050.0134
SER 2060.0207
SER 2060.0208
GLY 2070.0195
THR 2080.0230
THR 2080.0230
PHE 2090.0187
LYS 2100.0177
SER 2110.0173
THR 2120.0148
SER 2130.0120
ILE 2140.0087
ASP 2150.0068
ASP 2150.0068
GLY 2160.0042
ILE 2170.0020
ALA 2180.0021
ASP 2190.0019
THR 2200.0031
GLY 2210.0035
THR 2220.0040
THR 2230.0058
LEU 2240.0063
LEU 2250.0066
TYR 2260.0063
LEU 2270.0064
PRO 2280.0064
ALA 2290.0067
THR 2300.0069
VAL 2310.0061
VAL 2320.0062
SER 2330.0081
ALA 2340.0072
TYR 2350.0067
TRP 2360.0084
ALA 2370.0123
GLN 2380.0106
VAL 2390.0166
SER 2400.0284
SER 2400.0284
GLY 2410.0303
ALA 2420.0198
LYS 2430.0225
SER 2440.0212
SER 2450.0223
SER 2460.0327
SER 2470.0256
VAL 2480.0171
GLY 2490.0232
GLY 2500.0163
TYR 2510.0088
VAL 2520.0090
PHE 2530.0152
PRO 2540.0258
CYS 2550.0318
SER 2560.0411
ALA 2570.0252
THR 2580.0170
LEU 2590.0107
PRO 2600.0087
SER 2610.0112
PHE 2620.0097
THR 2630.0121
PHE 2640.0105
GLY 2650.0121
VAL 2660.0100
GLY 2670.0128
SER 2680.0160
ALA 2690.0138
ARG 2700.0138
ILE 2710.0112
VAL 2720.0122
ILE 2730.0097
PRO 2740.0105
GLY 2750.0103
ASP 2760.0108
ASP 2760.0108
TYR 2770.0083
ILE 2780.0084
ASP 2790.0104
PHE 2800.0105
GLY 2810.0236
PRO 2820.0326
ILE 2830.0335
SER 2840.0582
THR 2850.1026
GLY 2860.1041
SER 2870.0569
SER 2880.0559
SER 2890.0255
SER 2890.0255
CYS 2900.0177
PHE 2910.0098
GLY 2920.0084
GLY 2930.0079
ILE 2940.0074
GLN 2950.0076
SER 2960.0080
SER 2970.0058
ALA 2980.0060
ALA 2980.0060
GLY 2990.0058
GLY 2990.0063
ILE 3000.0049
GLY 3010.0030
ILE 3020.0031
ASN 3030.0047
ILE 3040.0046
PHE 3050.0051
GLY 3060.0048
ASP 3070.0045
VAL 3080.0064
ALA 3090.0065
LEU 3100.0050
LYS 3110.0057
LYS 3110.0057
ALA 3120.0069
ALA 3130.0075
PHE 3140.0055
VAL 3150.0034
VAL 3160.0028
PHE 3170.0044
ASN 3180.0062
GLY 3190.0097
ALA 3200.0117
THR 3210.0160
THR 3220.0129
PRO 3230.0078
PRO 3230.0078
THR 3240.0045
LEU 3250.0014
LEU 3250.0015
GLY 3260.0010
PHE 3270.0049
ALA 3280.0067
SER 3290.0095
SER 3290.0095
LYS 3300.0110

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.