CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HYDROLASE 10-FEB-15 4Y4D  ***

<R2> analysis for 2602120909361234529

---  normal mode 28  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0503
SER 10.0242
SER 10.0242
THR 20.0158
GLY 30.0067
SER 40.0016
ALA 50.0019
THR 60.0021
THR 70.0030
THR 80.0013
PRO 90.0012
ILE 100.0031
ASP 110.0105
SER 120.0157
LEU 130.0116
ASP 140.0057
ASP 150.0065
ALA 160.0033
TYR 170.0015
ILE 180.0037
THR 190.0025
PRO 200.0032
VAL 210.0063
GLN 220.0057
ILE 230.0045
GLY 240.0057
THR 250.0223
PRO 260.0249
ALA 270.0130
GLN 280.0091
THR 290.0056
LEU 300.0078
ASN 310.0053
LEU 320.0041
ASP 330.0026
PHE 340.0021
ASP 350.0026
THR 360.0028
GLY 370.0022
SER 380.0046
SER 390.0096
ASP 400.0085
LEU 410.0068
TRP 420.0061
VAL 430.0073
PHE 440.0070
SER 450.0109
SER 460.0129
GLU 470.0094
THR 480.0087
THR 490.0211
ALA 500.0244
SER 510.0276
GLU 520.0160
VAL 530.0035
ASP 540.0096
ASP 540.0096
GLY 550.0168
GLN 560.0151
THR 570.0131
ILE 580.0127
TYR 590.0100
THR 600.0101
PRO 610.0084
SER 620.0158
LYS 630.0101
SER 640.0138
THR 650.0322
THR 660.0246
ALA 670.0164
LYS 680.0240
LEU 690.0262
LEU 700.0212
SER 710.0490
GLY 720.0430
ALA 730.0155
THR 740.0205
TRP 750.0127
SER 760.0131
ILE 770.0101
SER 780.0088
SER 780.0088
TYR 790.0080
GLY 800.0127
ASP 810.0197
GLY 820.0141
SER 830.0129
SER 840.0068
SER 850.0036
SER 860.0047
GLY 870.0143
ASP 880.0113
VAL 890.0103
TYR 900.0077
THR 910.0063
ASP 920.0050
THR 930.0033
VAL 940.0063
SER 950.0077
VAL 960.0067
GLY 970.0055
GLY 980.0092
LEU 990.0113
THR 1000.0119
VAL 1010.0100
THR 1020.0051
GLY 1030.0031
GLN 1040.0054
ALA 1050.0055
VAL 1060.0060
GLU 1070.0083
SER 1080.0093
ALA 1090.0068
LYS 1100.0075
LYS 1110.0103
VAL 1120.0080
SER 1130.0243
SER 1140.0366
SER 1150.0345
SER 1150.0344
PHE 1160.0167
THR 1170.0167
GLU 1180.0304
ASP 1190.0237
SER 1200.0240
THR 1210.0160
ILE 1220.0097
ASP 1230.0076
GLY 1240.0056
LEU 1250.0048
LEU 1260.0043
GLY 1270.0057
LEU 1280.0052
ALA 1290.0042
PHE 1300.0046
SER 1310.0129
THR 1320.0131
LEU 1330.0100
ASN 1340.0129
THR 1350.0147
VAL 1360.0121
SER 1370.0199
PRO 1380.0188
THR 1390.0123
GLN 1400.0152
GLN 1410.0128
LYS 1420.0147
THR 1430.0113
PHE 1440.0109
PHE 1450.0116
ASP 1460.0132
ASP 1460.0132
ASN 1470.0163
ALA 1480.0162
LYS 1490.0167
ALA 1500.0252
SER 1510.0262
SER 1510.0262
LEU 1520.0206
ASP 1530.0248
SER 1540.0182
PRO 1550.0131
VAL 1560.0078
PHE 1570.0047
THR 1580.0042
ALA 1590.0078
ASP 1600.0088
LEU 1610.0067
GLY 1620.0064
TYR 1630.0088
HIS 1640.0107
ALA 1650.0082
PRO 1660.0053
GLY 1670.0054
THR 1680.0061
TYR 1690.0037
ASN 1700.0025
PHE 1710.0063
GLY 1720.0109
PHE 1730.0085
ILE 1740.0084
ASP 1750.0218
THR 1760.0342
THR 1770.0503
ALA 1780.0294
TYR 1790.0102
THR 1800.0078
GLY 1810.0135
SER 1820.0168
SER 1820.0168
ILE 1830.0085
THR 1840.0094
TYR 1850.0091
THR 1860.0087
ALA 1870.0167
VAL 1880.0146
SER 1890.0181
THR 1900.0134
LYS 1910.0205
GLN 1920.0170
GLY 1930.0076
PHE 1940.0067
TRP 1950.0078
GLU 1960.0108
TRP 1970.0098
THR 1980.0069
SER 1990.0030
THR 2000.0053
GLY 2010.0116
TYR 2020.0104
ALA 2030.0128
VAL 2040.0090
GLY 2050.0102
SER 2060.0347
SER 2060.0348
GLY 2070.0234
THR 2080.0250
THR 2080.0251
PHE 2090.0155
LYS 2100.0160
SER 2110.0182
THR 2120.0171
SER 2130.0054
ILE 2140.0037
ASP 2150.0068
ASP 2150.0068
GLY 2160.0071
ILE 2170.0082
ALA 2180.0068
ASP 2190.0051
THR 2200.0039
GLY 2210.0025
THR 2220.0033
THR 2230.0020
LEU 2240.0017
LEU 2250.0018
TYR 2260.0008
LEU 2270.0032
PRO 2280.0049
ALA 2290.0110
THR 2300.0144
VAL 2310.0093
VAL 2320.0074
SER 2330.0096
ALA 2340.0097
TYR 2350.0084
TRP 2360.0082
ALA 2370.0118
GLN 2380.0083
VAL 2390.0107
SER 2400.0186
SER 2400.0186
GLY 2410.0166
ALA 2420.0126
LYS 2430.0110
SER 2440.0091
SER 2450.0187
SER 2460.0485
SER 2470.0423
VAL 2480.0136
GLY 2490.0167
GLY 2500.0094
TYR 2510.0058
VAL 2520.0069
PHE 2530.0091
PRO 2540.0108
CYS 2550.0089
SER 2560.0231
ALA 2570.0119
THR 2580.0064
LEU 2590.0026
PRO 2600.0035
SER 2610.0072
PHE 2620.0071
THR 2630.0082
PHE 2640.0059
GLY 2650.0068
VAL 2660.0062
GLY 2670.0073
SER 2680.0133
ALA 2690.0115
ARG 2700.0114
ILE 2710.0072
VAL 2720.0079
ILE 2730.0067
PRO 2740.0080
GLY 2750.0056
ASP 2760.0073
ASP 2760.0073
TYR 2770.0060
ILE 2780.0049
ASP 2790.0058
PHE 2800.0065
GLY 2810.0114
PRO 2820.0065
ILE 2830.0178
SER 2840.0264
THR 2850.0138
GLY 2860.0473
SER 2870.0121
SER 2880.0100
SER 2890.0071
SER 2890.0072
CYS 2900.0067
PHE 2910.0062
GLY 2920.0053
GLY 2930.0036
ILE 2940.0042
GLN 2950.0023
SER 2960.0055
SER 2970.0059
ALA 2980.0096
ALA 2980.0093
GLY 2990.0237
GLY 2990.0226
ILE 3000.0193
GLY 3010.0178
ILE 3020.0129
ASN 3030.0049
ILE 3040.0047
PHE 3050.0038
GLY 3060.0039
ASP 3070.0035
VAL 3080.0033
ALA 3090.0048
LEU 3100.0064
LYS 3110.0068
LYS 3110.0068
ALA 3120.0083
ALA 3130.0091
PHE 3140.0079
VAL 3150.0081
VAL 3160.0075
PHE 3170.0083
ASN 3180.0101
GLY 3190.0099
ALA 3200.0147
THR 3210.0258
THR 3220.0224
PRO 3230.0140
PRO 3230.0140
THR 3240.0132
LEU 3250.0099
LEU 3250.0099
GLY 3260.0097
PHE 3270.0080
ALA 3280.0087
SER 3290.0086
SER 3290.0086
LYS 3300.0073

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.