CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HYDROLASE 10-FEB-15 4Y4D  ***

<R2> analysis for 2602120909361234529

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0554
SER 10.0116
SER 10.0116
THR 20.0140
GLY 30.0124
SER 40.0125
ALA 50.0143
THR 60.0107
THR 70.0122
THR 80.0136
PRO 90.0151
ILE 100.0156
ASP 110.0275
SER 120.0274
LEU 130.0148
ASP 140.0128
ASP 150.0127
ALA 160.0125
TYR 170.0083
ILE 180.0087
THR 190.0063
PRO 200.0056
VAL 210.0036
GLN 220.0037
ILE 230.0072
GLY 240.0066
THR 250.0123
PRO 260.0107
ALA 270.0076
GLN 280.0067
THR 290.0044
LEU 300.0054
ASN 310.0033
LEU 320.0029
ASP 330.0041
PHE 340.0043
ASP 350.0031
THR 360.0017
GLY 370.0059
SER 380.0076
SER 390.0090
ASP 400.0100
LEU 410.0020
TRP 420.0039
VAL 430.0078
PHE 440.0086
SER 450.0075
SER 460.0052
GLU 470.0046
THR 480.0069
THR 490.0086
ALA 500.0146
SER 510.0167
GLU 520.0105
VAL 530.0108
ASP 540.0154
ASP 540.0154
GLY 550.0170
GLN 560.0174
THR 570.0118
ILE 580.0105
TYR 590.0061
THR 600.0030
PRO 610.0059
SER 620.0092
LYS 630.0096
SER 640.0084
THR 650.0131
THR 660.0141
ALA 670.0083
LYS 680.0083
LEU 690.0100
LEU 700.0037
SER 710.0187
GLY 720.0130
ALA 730.0040
THR 740.0035
TRP 750.0068
SER 760.0129
ILE 770.0219
SER 780.0287
SER 780.0288
TYR 790.0149
GLY 800.0155
ASP 810.0435
GLY 820.0371
SER 830.0101
SER 840.0172
SER 850.0110
SER 860.0086
GLY 870.0055
ASP 880.0046
VAL 890.0045
TYR 900.0055
THR 910.0048
ASP 920.0078
THR 930.0077
VAL 940.0085
SER 950.0068
VAL 960.0085
GLY 970.0120
GLY 980.0119
LEU 990.0122
THR 1000.0109
VAL 1010.0081
THR 1020.0072
GLY 1030.0030
GLN 1040.0024
ALA 1050.0029
VAL 1060.0032
GLU 1070.0017
SER 1080.0033
ALA 1090.0063
LYS 1100.0075
LYS 1110.0082
VAL 1120.0099
SER 1130.0095
SER 1140.0050
SER 1150.0021
SER 1150.0021
PHE 1160.0046
THR 1170.0069
GLU 1180.0091
ASP 1190.0101
SER 1200.0147
THR 1210.0115
ILE 1220.0113
ASP 1230.0084
GLY 1240.0084
LEU 1250.0038
LEU 1260.0014
GLY 1270.0045
LEU 1280.0055
ALA 1290.0073
PHE 1300.0097
SER 1310.0126
THR 1320.0097
LEU 1330.0058
ASN 1340.0099
THR 1350.0107
VAL 1360.0087
SER 1370.0087
PRO 1380.0096
THR 1390.0130
GLN 1400.0146
GLN 1410.0126
LYS 1420.0122
THR 1430.0086
PHE 1440.0063
PHE 1450.0099
ASP 1460.0086
ASP 1460.0086
ASN 1470.0049
ALA 1480.0050
LYS 1490.0089
ALA 1500.0137
SER 1510.0102
SER 1510.0102
LEU 1520.0054
ASP 1530.0075
SER 1540.0092
PRO 1550.0101
VAL 1560.0062
PHE 1570.0066
THR 1580.0070
ALA 1590.0059
ASP 1600.0039
LEU 1610.0040
GLY 1620.0059
TYR 1630.0096
HIS 1640.0145
ALA 1650.0170
PRO 1660.0147
GLY 1670.0063
THR 1680.0089
TYR 1690.0086
ASN 1700.0113
PHE 1710.0102
GLY 1720.0092
PHE 1730.0072
ILE 1740.0073
ASP 1750.0107
THR 1760.0097
THR 1770.0312
ALA 1780.0105
TYR 1790.0130
THR 1800.0129
GLY 1810.0287
SER 1820.0350
SER 1820.0349
ILE 1830.0105
THR 1840.0119
TYR 1850.0037
THR 1860.0037
ALA 1870.0038
VAL 1880.0060
SER 1890.0240
THR 1900.0185
LYS 1910.0518
GLN 1920.0391
GLY 1930.0149
PHE 1940.0080
TRP 1950.0047
GLU 1960.0093
TRP 1970.0052
THR 1980.0056
SER 1990.0044
THR 2000.0067
GLY 2010.0040
TYR 2020.0090
ALA 2030.0080
VAL 2040.0084
GLY 2050.0100
SER 2060.0153
SER 2060.0153
GLY 2070.0185
THR 2080.0116
THR 2080.0119
PHE 2090.0085
LYS 2100.0214
SER 2110.0218
THR 2120.0131
SER 2130.0060
ILE 2140.0080
ASP 2150.0121
ASP 2150.0121
GLY 2160.0127
ILE 2170.0092
ALA 2180.0076
ASP 2190.0040
THR 2200.0027
GLY 2210.0014
THR 2220.0040
THR 2230.0028
LEU 2240.0056
LEU 2250.0060
TYR 2260.0060
LEU 2270.0091
PRO 2280.0132
ALA 2290.0230
THR 2300.0304
VAL 2310.0148
VAL 2320.0080
SER 2330.0125
ALA 2340.0122
TYR 2350.0075
TRP 2360.0061
ALA 2370.0129
GLN 2380.0106
VAL 2390.0107
SER 2400.0146
SER 2400.0146
GLY 2410.0138
ALA 2420.0061
LYS 2430.0024
SER 2440.0027
SER 2450.0055
SER 2460.0091
SER 2470.0183
VAL 2480.0052
GLY 2490.0077
GLY 2500.0047
TYR 2510.0020
VAL 2520.0038
PHE 2530.0059
PRO 2540.0051
CYS 2550.0013
SER 2560.0090
ALA 2570.0073
THR 2580.0065
LEU 2590.0040
PRO 2600.0049
SER 2610.0025
PHE 2620.0048
THR 2630.0060
PHE 2640.0037
GLY 2650.0057
VAL 2660.0049
GLY 2670.0162
SER 2680.0243
ALA 2690.0102
ARG 2700.0087
ILE 2710.0042
VAL 2720.0064
ILE 2730.0032
PRO 2740.0036
GLY 2750.0060
ASP 2760.0068
ASP 2760.0067
TYR 2770.0039
ILE 2780.0049
ASP 2790.0074
PHE 2800.0076
GLY 2810.0075
PRO 2820.0119
ILE 2830.0160
SER 2840.0180
THR 2850.0260
GLY 2860.0316
SER 2870.0257
SER 2880.0271
SER 2890.0104
SER 2890.0104
CYS 2900.0074
PHE 2910.0074
GLY 2920.0071
GLY 2930.0062
ILE 2940.0049
GLN 2950.0030
SER 2960.0118
SER 2970.0090
ALA 2980.0138
ALA 2980.0136
GLY 2990.0536
GLY 2990.0503
ILE 3000.0301
GLY 3010.0203
ILE 3020.0139
ASN 3030.0117
ILE 3040.0117
PHE 3050.0070
GLY 3060.0067
ASP 3070.0033
VAL 3080.0039
ALA 3090.0046
LEU 3100.0043
LYS 3110.0028
LYS 3110.0028
ALA 3120.0028
ALA 3130.0035
PHE 3140.0032
VAL 3150.0029
VAL 3160.0026
PHE 3170.0044
ASN 3180.0047
GLY 3190.0188
ALA 3200.0242
THR 3210.0375
THR 3220.0554
PRO 3230.0087
PRO 3230.0087
THR 3240.0016
LEU 3250.0019
LEU 3250.0019
GLY 3260.0017
PHE 3270.0038
ALA 3280.0037
SER 3290.0039
SER 3290.0038
LYS 3300.0067

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.