CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SUGAR BINDING PROTEIN 10-JUL-21 7RDP  ***

<R2> analysis for 2602121014121285500

---  normal mode 23  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0601
GLY 1120.0556
PRO 1130.0426
LEU 1140.0338
ILE 1150.0304
VAL 1160.0233
PRO 1170.0321
TYR 1180.0216
ASN 1190.0261
LEU 1200.0149
PRO 1210.0345
LEU 1220.0382
PRO 1230.0579
GLY 1240.0529
GLY 1250.0388
VAL 1260.0321
VAL 1270.0295
PRO 1280.0343
ARG 1290.0428
MET 1300.0221
LEU 1310.0062
ILE 1320.0054
THR 1330.0213
ILE 1340.0185
LEU 1350.0201
GLY 1360.0255
THR 1370.0185
VAL 1380.0146
LYS 1390.0128
PRO 1400.0094
ASN 1410.0265
ALA 1420.0149
ASN 1430.0146
ASN 1430.0147
ARG 1440.0148
ILE 1450.0192
ALA 1460.0180
LEU 1470.0138
ASP 1480.0090
PHE 1490.0116
GLN 1500.0198
ARG 1510.0222
GLY 1520.0253
ASN 1530.0356
ASP 1540.0206
VAL 1550.0147
ALA 1560.0154
PHE 1570.0119
HIS 1580.0117
PHE 1590.0123
ASN 1600.0112
PRO 1610.0101
ARG 1620.0087
PHE 1630.0082
ASN 1640.0095
GLU 1650.0053
ASN 1660.0205
ASN 1660.0205
ASN 1670.0253
ARG 1680.0124
ARG 1690.0087
VAL 1700.0110
ILE 1710.0050
VAL 1720.0094
CYS 1730.0085
ASN 1740.0163
THR 1750.0178
LYS 1760.0097
LEU 1770.0101
ASP 1780.0291
ASN 1790.0123
ASN 1800.0304
TRP 1810.0120
GLY 1820.0217
ARG 1830.0362
GLU 1840.0217
GLU 1850.0139
ARG 1860.0120
GLN 1870.0093
SER 1880.0217
VAL 1890.0280
PHE 1900.0187
PRO 1910.0269
PHE 1920.0149
GLU 1930.0132
GLU 1930.0132
SER 1940.0038
GLY 1950.0013
LYS 1960.0139
PRO 1970.0193
PHE 1980.0220
LYS 1990.0232
ILE 2000.0233
GLN 2010.0271
VAL 2020.0171
LEU 2030.0177
VAL 2040.0202
GLU 2050.0308
PRO 2060.0359
ASP 2070.0457
HIS 2080.0308
PHE 2090.0254
LYS 2100.0327
VAL 2110.0304
ALA 2120.0352
VAL 2130.0302
ASN 2140.0377
ASP 2150.0601
ALA 2160.0601
HIS 2170.0472
LEU 2180.0321
LEU 2190.0268
GLN 2200.0311
TYR 2210.0191
ASN 2220.0221
ASN 2220.0222
HIS 2230.0162
ARG 2240.0313
VAL 2250.0226
LYS 2260.0421
LYS 2270.0344
LEU 2280.0273
ASN 2290.0438
GLU 2300.0328
ILE 2310.0273
SER 2320.0398
SER 2320.0398
LYS 2330.0305
LEU 2340.0122
GLY 2350.0139
ILE 2360.0180
SER 2370.0227
GLY 2380.0282
ASP 2390.0227
ILE 2400.0250
ASP 2410.0242
LEU 2420.0217
THR 2430.0230
SER 2440.0219
SER 2440.0220
ALA 2450.0190
SER 2460.0201
TYR 2470.0287
THR 2480.0448
MET 2490.0493
MET 2490.0491
ILE 2500.0548

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.