CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SUGAR BINDING PROTEIN 10-JUL-21 7RDP  ***

<R2> analysis for 2602121014121285500

---  normal mode 59  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0942
GLY 1120.0785
PRO 1130.0179
LEU 1140.0180
ILE 1150.0196
VAL 1160.0160
PRO 1170.0171
TYR 1180.0088
ASN 1190.0296
LEU 1200.0171
PRO 1210.0137
LEU 1220.0072
PRO 1230.0244
GLY 1240.0280
GLY 1250.0298
VAL 1260.0185
VAL 1270.0190
PRO 1280.0134
ARG 1290.0269
MET 1300.0108
LEU 1310.0140
ILE 1320.0067
THR 1330.0091
ILE 1340.0107
LEU 1350.0116
GLY 1360.0112
THR 1370.0180
VAL 1380.0109
LYS 1390.0140
PRO 1400.0207
ASN 1410.0142
ALA 1420.0115
ASN 1430.0115
ASN 1430.0115
ARG 1440.0077
ILE 1450.0127
ALA 1460.0164
LEU 1470.0125
ASP 1480.0198
PHE 1490.0272
GLN 1500.0238
ARG 1510.0153
GLY 1520.0211
ASN 1530.0942
ASP 1540.0033
VAL 1550.0174
ALA 1560.0121
PHE 1570.0142
HIS 1580.0073
PHE 1590.0114
ASN 1600.0124
PRO 1610.0051
ARG 1620.0157
PHE 1630.0168
ASN 1640.0200
GLU 1650.0375
ASN 1660.0239
ASN 1660.0232
ASN 1670.0339
ARG 1680.0382
ARG 1690.0301
VAL 1700.0197
ILE 1710.0112
VAL 1720.0204
CYS 1730.0153
ASN 1740.0066
THR 1750.0083
LYS 1760.0185
LEU 1770.0097
ASP 1780.0230
ASN 1790.0175
ASN 1800.0189
TRP 1810.0229
GLY 1820.0258
ARG 1830.0245
GLU 1840.0281
GLU 1850.0329
ARG 1860.0321
GLN 1870.0175
SER 1880.0661
VAL 1890.0578
PHE 1900.0271
PRO 1910.0208
PHE 1920.0075
GLU 1930.0140
GLU 1930.0140
SER 1940.0046
GLY 1950.0178
LYS 1960.0196
PRO 1970.0351
PHE 1980.0315
LYS 1990.0281
ILE 2000.0216
GLN 2010.0091
VAL 2020.0164
LEU 2030.0283
VAL 2040.0133
GLU 2050.0209
PRO 2060.0128
ASP 2070.0177
HIS 2080.0302
PHE 2090.0231
LYS 2100.0303
VAL 2110.0086
ALA 2120.0131
VAL 2130.0220
ASN 2140.0284
ASP 2150.0372
ALA 2160.0223
HIS 2170.0391
LEU 2180.0244
LEU 2190.0122
GLN 2200.0249
TYR 2210.0271
ASN 2220.0383
ASN 2220.0381
HIS 2230.0270
ARG 2240.0344
VAL 2250.0189
LYS 2260.0295
LYS 2270.0152
LEU 2280.0179
ASN 2290.0308
GLU 2300.0288
ILE 2310.0225
SER 2320.0197
SER 2320.0197
LYS 2330.0163
LEU 2340.0200
GLY 2350.0205
ILE 2360.0073
SER 2370.0081
GLY 2380.0084
ASP 2390.0065
ILE 2400.0056
ASP 2410.0048
LEU 2420.0147
THR 2430.0180
SER 2440.0143
SER 2440.0145
ALA 2450.0094
SER 2460.0150
TYR 2470.0206
THR 2480.0397
MET 2490.0185
MET 2490.0184
ILE 2500.0277

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.