CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SUGAR BINDING PROTEIN 10-JUL-21 7RDP  ***

<R2> analysis for 2602121014121285500

---  normal mode 84  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0625
GLY 1120.0625
PRO 1130.0191
LEU 1140.0154
ILE 1150.0219
VAL 1160.0218
PRO 1170.0154
TYR 1180.0148
ASN 1190.0252
LEU 1200.0140
PRO 1210.0171
LEU 1220.0116
PRO 1230.0189
GLY 1240.0294
GLY 1250.0142
VAL 1260.0066
VAL 1270.0189
PRO 1280.0205
ARG 1290.0308
MET 1300.0174
LEU 1310.0239
ILE 1320.0106
THR 1330.0230
ILE 1340.0127
LEU 1350.0059
GLY 1360.0202
THR 1370.0112
VAL 1380.0051
LYS 1390.0166
PRO 1400.0107
ASN 1410.0450
ALA 1420.0173
ASN 1430.0271
ASN 1430.0271
ARG 1440.0131
ILE 1450.0069
ALA 1460.0105
LEU 1470.0084
ASP 1480.0079
PHE 1490.0014
GLN 1500.0085
ARG 1510.0164
GLY 1520.0257
ASN 1530.0382
ASP 1540.0229
VAL 1550.0164
ALA 1560.0042
PHE 1570.0104
HIS 1580.0169
PHE 1590.0120
ASN 1600.0172
PRO 1610.0047
ARG 1620.0053
PHE 1630.0156
ASN 1640.0239
GLU 1650.0332
ASN 1660.0380
ASN 1660.0353
ASN 1670.0229
ARG 1680.0132
ARG 1690.0087
VAL 1700.0053
ILE 1710.0080
VAL 1720.0241
CYS 1730.0213
ASN 1740.0161
THR 1750.0072
LYS 1760.0037
LEU 1770.0089
ASP 1780.0306
ASN 1790.0246
ASN 1800.0251
TRP 1810.0080
GLY 1820.0085
ARG 1830.0191
GLU 1840.0291
GLU 1850.0288
ARG 1860.0207
GLN 1870.0126
SER 1880.0111
VAL 1890.0323
PHE 1900.0034
PRO 1910.0082
PHE 1920.0094
GLU 1930.0064
GLU 1930.0064
SER 1940.0060
GLY 1950.0169
LYS 1960.0183
PRO 1970.0367
PHE 1980.0208
LYS 1990.0176
ILE 2000.0060
GLN 2010.0041
VAL 2020.0151
LEU 2030.0221
VAL 2040.0211
GLU 2050.0285
PRO 2060.0412
ASP 2070.0126
HIS 2080.0213
PHE 2090.0278
LYS 2100.0319
VAL 2110.0277
ALA 2120.0178
VAL 2130.0057
ASN 2140.0144
ASP 2150.0154
ALA 2160.0262
HIS 2170.0395
LEU 2180.0109
LEU 2190.0116
GLN 2200.0139
TYR 2210.0326
ASN 2220.0456
ASN 2220.0452
HIS 2230.0392
ARG 2240.0140
VAL 2250.0101
LYS 2260.0165
LYS 2270.0245
LEU 2280.0175
ASN 2290.0246
GLU 2300.0070
ILE 2310.0074
SER 2320.0082
SER 2320.0081
LYS 2330.0054
LEU 2340.0112
GLY 2350.0227
ILE 2360.0131
SER 2370.0186
GLY 2380.0145
ASP 2390.0076
ILE 2400.0097
ASP 2410.0248
LEU 2420.0108
THR 2430.0244
SER 2440.0170
SER 2440.0168
ALA 2450.0087
SER 2460.0105
TYR 2470.0195
THR 2480.0155
MET 2490.0078
MET 2490.0077
ILE 2500.0427

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.