CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SUGAR BINDING PROTEIN 10-JUL-21 7RDP  ***

<R2> analysis for 2602121516161351776

---  normal mode 18  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1345
GLY 1120.1345
PRO 1130.0630
LEU 1140.0230
ILE 1150.0343
VAL 1160.0177
PRO 1170.0281
TYR 1180.0212
ASN 1190.0337
LEU 1200.0313
PRO 1210.0319
LEU 1220.0251
PRO 1230.0276
GLY 1240.0284
GLY 1250.0156
VAL 1260.0149
VAL 1270.0106
PRO 1280.0089
ARG 1290.0082
MET 1300.0214
LEU 1310.0251
ILE 1320.0298
THR 1330.0288
ILE 1340.0231
LEU 1350.0122
GLY 1360.0101
THR 1370.0248
VAL 1380.0259
LYS 1390.0275
PRO 1400.0264
ASN 1410.0696
ALA 1420.0091
ASN 1430.0097
ASN 1430.0097
ARG 1440.0079
ILE 1450.0045
ALA 1460.0079
LEU 1470.0122
ASP 1480.0144
PHE 1490.0137
GLN 1500.0126
ARG 1510.0181
GLY 1520.0222
ASN 1530.0300
ASP 1540.0203
VAL 1550.0148
ALA 1560.0149
PHE 1570.0147
HIS 1580.0149
PHE 1590.0116
ASN 1600.0141
PRO 1610.0138
ARG 1620.0192
PHE 1630.0188
ASN 1640.0206
GLU 1650.0298
ASN 1660.0363
ASN 1660.0362
ASN 1670.0210
ARG 1680.0162
ARG 1690.0296
VAL 1700.0271
ILE 1710.0201
VAL 1720.0226
CYS 1730.0143
ASN 1740.0132
THR 1750.0160
LYS 1760.0147
LEU 1770.0218
ASP 1780.0381
ASN 1790.0390
ASN 1800.0348
TRP 1810.0185
GLY 1820.0140
ARG 1830.0087
GLU 1840.0127
GLU 1850.0145
ARG 1860.0301
GLN 1870.0296
SER 1880.0381
VAL 1890.0396
PHE 1900.0342
PRO 1910.0303
PHE 1920.0283
GLU 1930.0381
GLU 1930.0381
SER 1940.0283
GLY 1950.0434
LYS 1960.0495
PRO 1970.0333
PHE 1980.0143
LYS 1990.0078
ILE 2000.0158
GLN 2010.0213
VAL 2020.0243
LEU 2030.0203
VAL 2040.0169
GLU 2050.0136
PRO 2060.0091
ASP 2070.0158
HIS 2080.0190
PHE 2090.0195
LYS 2100.0211
VAL 2110.0178
ALA 2120.0125
VAL 2130.0079
ASN 2140.0073
ASP 2150.0095
ALA 2160.0088
HIS 2170.0086
LEU 2180.0097
LEU 2190.0162
GLN 2200.0202
TYR 2210.0214
ASN 2220.0214
ASN 2220.0214
HIS 2230.0177
ARG 2240.0181
VAL 2250.0193
LYS 2260.0189
LYS 2270.0280
LEU 2280.0078
ASN 2290.0235
GLU 2300.0183
ILE 2310.0040
SER 2320.0095
SER 2320.0094
LYS 2330.0192
LEU 2340.0227
GLY 2350.0243
ILE 2360.0196
SER 2370.0114
GLY 2380.0059
ASP 2390.0119
ILE 2400.0141
ASP 2410.0169
LEU 2420.0045
THR 2430.0204
SER 2440.0193
SER 2440.0190
ALA 2450.0285
SER 2460.0336
TYR 2470.0352
THR 2480.0347
MET 2490.0324
MET 2490.0323
ILE 2500.0224

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.