CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SUGAR BINDING PROTEIN 10-JUL-21 7RDP  ***

<R2> analysis for 2602121516161351776

---  normal mode 22  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0788
GLY 1120.0267
PRO 1130.0396
LEU 1140.0380
ILE 1150.0788
VAL 1160.0325
PRO 1170.0275
TYR 1180.0240
ASN 1190.0193
LEU 1200.0259
PRO 1210.0267
LEU 1220.0220
PRO 1230.0271
GLY 1240.0167
GLY 1250.0140
VAL 1260.0115
VAL 1270.0035
PRO 1280.0093
ARG 1290.0134
MET 1300.0137
LEU 1310.0200
ILE 1320.0136
THR 1330.0174
ILE 1340.0202
LEU 1350.0261
GLY 1360.0329
THR 1370.0306
VAL 1380.0231
LYS 1390.0268
PRO 1400.0415
ASN 1410.0505
ALA 1420.0362
ASN 1430.0402
ASN 1430.0402
ARG 1440.0246
ILE 1450.0145
ALA 1460.0181
LEU 1470.0190
ASP 1480.0205
PHE 1490.0179
GLN 1500.0201
ARG 1510.0239
GLY 1520.0238
ASN 1530.0252
ASP 1540.0272
VAL 1550.0229
ALA 1560.0231
PHE 1570.0187
HIS 1580.0203
PHE 1590.0158
ASN 1600.0111
PRO 1610.0077
ARG 1620.0145
PHE 1630.0242
ASN 1640.0262
GLU 1650.0271
ASN 1660.0109
ASN 1660.0109
ASN 1670.0071
ARG 1680.0292
ARG 1690.0273
VAL 1700.0202
ILE 1710.0103
VAL 1720.0144
CYS 1730.0173
ASN 1740.0206
THR 1750.0260
LYS 1760.0250
LEU 1770.0321
ASP 1780.0459
ASN 1790.0237
ASN 1800.0199
TRP 1810.0280
GLY 1820.0340
ARG 1830.0434
GLU 1840.0333
GLU 1850.0268
ARG 1860.0323
GLN 1870.0254
SER 1880.0331
VAL 1890.0241
PHE 1900.0122
PRO 1910.0059
PHE 1920.0072
GLU 1930.0148
GLU 1930.0148
SER 1940.0263
GLY 1950.0305
LYS 1960.0240
PRO 1970.0305
PHE 1980.0290
LYS 1990.0340
ILE 2000.0286
GLN 2010.0233
VAL 2020.0180
LEU 2030.0111
VAL 2040.0076
GLU 2050.0069
PRO 2060.0075
ASP 2070.0065
HIS 2080.0080
PHE 2090.0138
LYS 2100.0199
VAL 2110.0264
ALA 2120.0326
VAL 2130.0321
ASN 2140.0402
ASP 2150.0610
ALA 2160.0415
HIS 2170.0428
LEU 2180.0302
LEU 2190.0255
GLN 2200.0195
TYR 2210.0158
ASN 2220.0155
ASN 2220.0155
HIS 2230.0170
ARG 2240.0275
VAL 2250.0261
LYS 2260.0260
LYS 2270.0235
LEU 2280.0152
ASN 2290.0136
GLU 2300.0165
ILE 2310.0175
SER 2320.0157
SER 2320.0156
LYS 2330.0164
LEU 2340.0155
GLY 2350.0105
ILE 2360.0082
SER 2370.0175
GLY 2380.0221
ASP 2390.0272
ILE 2400.0233
ASP 2410.0270
LEU 2420.0238
THR 2430.0232
SER 2440.0203
SER 2440.0203
ALA 2450.0172
SER 2460.0205
TYR 2470.0247
THR 2480.0397
MET 2490.0227
MET 2490.0227
ILE 2500.0377

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.