CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SUGAR BINDING PROTEIN 10-JUL-21 7RDP  ***

<R2> analysis for 2602121516161351776

---  normal mode 51  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0726
GLY 1120.0726
PRO 1130.0263
LEU 1140.0216
ILE 1150.0077
VAL 1160.0142
PRO 1170.0370
TYR 1180.0206
ASN 1190.0296
LEU 1200.0187
PRO 1210.0258
LEU 1220.0219
PRO 1230.0438
GLY 1240.0571
GLY 1250.0284
VAL 1260.0069
VAL 1270.0156
PRO 1280.0281
ARG 1290.0304
MET 1300.0174
LEU 1310.0170
ILE 1320.0109
THR 1330.0121
ILE 1340.0101
LEU 1350.0196
GLY 1360.0234
THR 1370.0116
VAL 1380.0276
LYS 1390.0438
PRO 1400.0371
ASN 1410.0401
ALA 1420.0399
ASN 1430.0235
ASN 1430.0235
ARG 1440.0233
ILE 1450.0140
ALA 1460.0261
LEU 1470.0190
ASP 1480.0168
PHE 1490.0094
GLN 1500.0155
ARG 1510.0079
GLY 1520.0094
ASN 1530.0450
ASP 1540.0149
VAL 1550.0085
ALA 1560.0093
PHE 1570.0085
HIS 1580.0109
PHE 1590.0154
ASN 1600.0131
PRO 1610.0112
ARG 1620.0089
PHE 1630.0117
ASN 1640.0106
GLU 1650.0058
ASN 1660.0040
ASN 1660.0040
ASN 1670.0156
ARG 1680.0136
ARG 1690.0134
VAL 1700.0147
ILE 1710.0154
VAL 1720.0101
CYS 1730.0092
ASN 1740.0117
THR 1750.0132
LYS 1760.0190
LEU 1770.0195
ASP 1780.0228
ASN 1790.0294
ASN 1800.0213
TRP 1810.0081
GLY 1820.0204
ARG 1830.0373
GLU 1840.0090
GLU 1850.0106
ARG 1860.0115
GLN 1870.0263
SER 1880.0365
VAL 1890.0333
PHE 1900.0192
PRO 1910.0228
PHE 1920.0242
GLU 1930.0389
GLU 1930.0389
SER 1940.0305
GLY 1950.0151
LYS 1960.0333
PRO 1970.0347
PHE 1980.0316
LYS 1990.0166
ILE 2000.0135
GLN 2010.0102
VAL 2020.0115
LEU 2030.0153
VAL 2040.0248
GLU 2050.0231
PRO 2060.0314
ASP 2070.0260
HIS 2080.0249
PHE 2090.0189
LYS 2100.0108
VAL 2110.0261
ALA 2120.0375
VAL 2130.0259
ASN 2140.0097
ASP 2150.0491
ALA 2160.0361
HIS 2170.0590
LEU 2180.0509
LEU 2190.0321
GLN 2200.0120
TYR 2210.0168
ASN 2220.0211
ASN 2220.0211
HIS 2230.0233
ARG 2240.0188
VAL 2250.0232
LYS 2260.0636
LYS 2270.0247
LEU 2280.0133
ASN 2290.0300
GLU 2300.0258
ILE 2310.0177
SER 2320.0269
SER 2320.0269
LYS 2330.0242
LEU 2340.0196
GLY 2350.0319
ILE 2360.0254
SER 2370.0408
GLY 2380.0334
ASP 2390.0400
ILE 2400.0348
ASP 2410.0359
LEU 2420.0110
THR 2430.0068
SER 2440.0232
SER 2440.0231
ALA 2450.0210
SER 2460.0271
TYR 2470.0209
THR 2480.0129
MET 2490.0089
MET 2490.0090
ILE 2500.0127

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.