CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SUGAR BINDING PROTEIN 10-JUL-21 7RDP  ***

<R2> analysis for 2602121516161351776

---  normal mode 89  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0638
GLY 1120.0321
PRO 1130.0247
LEU 1140.0084
ILE 1150.0496
VAL 1160.0219
PRO 1170.0303
TYR 1180.0405
ASN 1190.0380
LEU 1200.0187
PRO 1210.0551
LEU 1220.0377
PRO 1230.0634
GLY 1240.0638
GLY 1250.0272
VAL 1260.0192
VAL 1270.0398
PRO 1280.0291
ARG 1290.0434
MET 1300.0166
LEU 1310.0273
ILE 1320.0187
THR 1330.0331
ILE 1340.0245
LEU 1350.0172
GLY 1360.0083
THR 1370.0076
VAL 1380.0133
LYS 1390.0162
PRO 1400.0220
ASN 1410.0449
ALA 1420.0208
ASN 1430.0170
ASN 1430.0170
ARG 1440.0108
ILE 1450.0126
ALA 1460.0185
LEU 1470.0131
ASP 1480.0239
PHE 1490.0142
GLN 1500.0232
ARG 1510.0249
GLY 1520.0343
ASN 1530.0416
ASP 1540.0260
VAL 1550.0216
ALA 1560.0095
PHE 1570.0112
HIS 1580.0159
PHE 1590.0127
ASN 1600.0106
PRO 1610.0076
ARG 1620.0078
PHE 1630.0129
ASN 1640.0200
GLU 1650.0188
ASN 1660.0294
ASN 1660.0289
ASN 1670.0029
ARG 1680.0383
ARG 1690.0127
VAL 1700.0097
ILE 1710.0083
VAL 1720.0109
CYS 1730.0090
ASN 1740.0082
THR 1750.0099
LYS 1760.0204
LEU 1770.0143
ASP 1780.0204
ASN 1790.0176
ASN 1800.0308
TRP 1810.0308
GLY 1820.0464
ARG 1830.0334
GLU 1840.0182
GLU 1850.0106
ARG 1860.0171
GLN 1870.0249
SER 1880.0575
VAL 1890.0239
PHE 1900.0326
PRO 1910.0271
PHE 1920.0202
GLU 1930.0173
GLU 1930.0172
SER 1940.0177
GLY 1950.0249
LYS 1960.0149
PRO 1970.0085
PHE 1980.0136
LYS 1990.0158
ILE 2000.0143
GLN 2010.0238
VAL 2020.0115
LEU 2030.0119
VAL 2040.0083
GLU 2050.0090
PRO 2060.0104
ASP 2070.0127
HIS 2080.0062
PHE 2090.0117
LYS 2100.0081
VAL 2110.0240
ALA 2120.0324
VAL 2130.0153
ASN 2140.0190
ASP 2150.0201
ALA 2160.0329
HIS 2170.0347
LEU 2180.0210
LEU 2190.0136
GLN 2200.0146
TYR 2210.0148
ASN 2220.0123
ASN 2220.0121
HIS 2230.0072
ARG 2240.0082
VAL 2250.0083
LYS 2260.0335
LYS 2270.0354
LEU 2280.0152
ASN 2290.0100
GLU 2300.0261
ILE 2310.0222
SER 2320.0316
SER 2320.0315
LYS 2330.0090
LEU 2340.0248
GLY 2350.0637
ILE 2360.0318
SER 2370.0178
GLY 2380.0292
ASP 2390.0101
ILE 2400.0126
ASP 2410.0122
LEU 2420.0091
THR 2430.0308
SER 2440.0369
SER 2440.0373
ALA 2450.0336
SER 2460.0444
TYR 2470.0212
THR 2480.0322
MET 2490.0124
MET 2490.0125
ILE 2500.0261

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.