*** ***
Output from eigenvector calculation:
STDOUT:
Build Tirion matrix:
Pdbmat> Computes the Hessian matrix, using an Elastic Network Model.
Pdbmat> Version 3.50, Fevrier 2004.
Pdbmat> Options to be read in pdbmat.dat file.
Pdbmat> Coordinate filename = 2602140528231840242.atom
Pdbmat> Distance cutoff = 5.00
Force constant = 10.00
Origin of mass values = CONS
Pdbmat> Levelshift = 1.0E-09
PRINTing level = 2
Pdbmat> Coordinate file 2602140528231840242.atom to be opened.
Openam> File opened: 2602140528231840242.atom
Pdbmat> Coordinate file in PDB format.
Rdatompdb> Reading pdb file.
Rdatompdb> End of file reached.
Rdatompdb> Number of I/O errors: 0
Rdatompdb> Number of residues found = 24
First residue number = 33
Last residue number = 56
Number of atoms found = 24
Mean number per residue = 1.0
Pdbmat> Coordinate statistics:
= 17.113042 +/- 7.447453 From: 6.185000 To: 30.802000
= 13.583875 +/- 6.906375 From: 1.815000 To: 23.009000
= 2.200250 +/- 3.607992 From: -2.907000 To: 11.612000
Pdbmat> Masses are all set to one.
Openam> File opened: pdbmat.xyzm
Pdbmat> Coordinates and masses considered are saved.
Openam> File opened: pdbmat.sdijf
Pdbmat> Matrix statistics:
Pdbmat> The matrix is 13.3562 % Filled.
Pdbmat> 351 non-zero elements.
Pdbmat> 23 atom-atom interactions.
Pdbmat> Number per atom= 1.92 +/- 0.28
Maximum number = 2
Minimum number = 1
Pdbmat> Matrix trace = 460.000
Pdbmat> Larger element = 11.6972
Pdbmat> 0 elements larger than +/- 1.0E+10
Pdbmat> Normal end.
using diagstd (there are 24 atoms in your structure)
Diagstd> Version 1.05, August 2004.
Diagstd> Matrix to be read from file: pdbmat.sdijf
Diagstd> Lecture de la matrice -Format CERFACS-
Diagstd> Matrix dimension (Nord) = 72
Diagstd> Number of non-zero elements 351
Diagstd> Nb of elements found twice: 0
Diagstd> Nb of elements > 1E+10 : 0
Diagstd> Matrix trace: 460.0000001
%Diagstd-Wn: Nb on non-zero elements there: 72
Openam> file on opening on unit 11:
pdbmat.eigenfacs
Diagstd> Diagonalization.
Diagstd> 72 eigenvectors are about to be computed.
Diagstd> Sum of eigenvalues = 460.0000001
Diagstd> Eigenvalues:
0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
0.0000000 0.0000000 0.0000000 0.0000000 14.0723894
14.7172583 16.4366314 18.0240028 18.6550440 18.9717480
19.2181766 19.5116329 19.7232302 19.8911223 19.9056670
20.0000000 20.0943330 20.1088777 20.2767698 20.4883671
20.7818234 21.0282520 21.3449560 21.9759972 23.5633686
25.2827417 25.9276106
Diagstd> Frequencies (cm-1, if the matrix is a hessien in CHARMM units):
0.0033988 0.0034070 0.0034089 0.0034136 0.0034149
0.0034167 0.0034175 0.0034179 0.0034185 0.0034220
0.0034227 0.0034239 0.0034243 0.0034259 0.0034265
0.0034269 0.0034271 0.0034272 0.0034297 0.0034305
0.0034311 0.0034315 0.0034330 0.0034334 0.0034335
0.0034338 0.0034339 0.0034339 0.0034348 0.0034351
0.0034358 0.0034359 0.0034362 0.0034365 0.0034368
0.0034385 0.0034388 0.0034399 0.0034402 0.0034423
0.0034427 0.0034429 0.0034437 0.0034440 0.0034443
0.0034444 0.0034475 0.0034514 0.0034562 407.3607697
416.5898998 440.2523558 461.0212064 469.0222209 472.9867275
476.0486848 479.6694822 482.2633986 484.3116593 484.4886943
485.6353344 486.7792736 486.9554114 488.9840185 491.5287823
495.0363681 497.9627613 501.6986271 509.0607069 527.1254303
546.0185083 552.9381153
Diagstd> Normal end.
B-factor analysis
Bfactors> Version 1.22, Bordeaux.
Getnam> Eigenvector filename ?
Getnam> 2602140528231840242.eigenfacs
Openam> file on opening on unit 10:
2602140528231840242.eigenfacs
Getnam> Corresponding pdb filename ?
Getnam> 2602140528231840242.atom
Openam> file on opening on unit 11:
2602140528231840242.atom
Getnum> Number of skipped eigenvectors ?
Getnum> 0
Getnum> Number of usefull eigenvectors ?
Getnum> 10000
%Getnum-Err: number larger than 106 This is not allowed. Sorry.
Rdatompdb> Reading pdb file.
Rdatompdb> End of file reached.
Rdatompdb> Number of I/O errors: 0
Rdatompdb> Number of residues found = 24
First residue number = 33
Last residue number = 56
Number of atoms found = 24
Mean number per residue = 1.0
Rdmodfacs> Old Blzpack file format detected.
Rdmodfacs> Numero du vecteur CERFACS en lecture: 1
Rdmodfacs> Valeur propre du vecteur en lecture: 9.7961E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 2
Rdmodfacs> Valeur propre du vecteur en lecture: 9.8437E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 3
Rdmodfacs> Valeur propre du vecteur en lecture: 9.8546E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 4
Rdmodfacs> Valeur propre du vecteur en lecture: 9.8818E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 5
Rdmodfacs> Valeur propre du vecteur en lecture: 9.8893E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 6
Rdmodfacs> Valeur propre du vecteur en lecture: 9.8996E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 7
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9043E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 8
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9066E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 9
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9102E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 10
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9305E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 11
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9347E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 12
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9417E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 13
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9437E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 14
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9529E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 15
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9563E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 16
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9587E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 17
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9599E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 18
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9609E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 19
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9754E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 20
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9801E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 21
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9832E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 22
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9858E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 23
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9947E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 24
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9965E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 25
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9974E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 26
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9988E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 27
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9997E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 28
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9998E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 29
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0005E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 30
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0007E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 31
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0011E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 32
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0011E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 33
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0013E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 34
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0015E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 35
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0017E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 36
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0027E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 37
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0028E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 38
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0034E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 39
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0037E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 40
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0048E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 41
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0051E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 42
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0052E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 43
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0057E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 44
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0059E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 45
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0060E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 46
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0061E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 47
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0079E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 48
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0102E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 49
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0130E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 50
Rdmodfacs> Valeur propre du vecteur en lecture: 14.07
Rdmodfacs> Numero du vecteur CERFACS en lecture: 51
Rdmodfacs> Valeur propre du vecteur en lecture: 14.72
Rdmodfacs> Numero du vecteur CERFACS en lecture: 52
Rdmodfacs> Valeur propre du vecteur en lecture: 16.44
Rdmodfacs> Numero du vecteur CERFACS en lecture: 53
Rdmodfacs> Valeur propre du vecteur en lecture: 18.02
Rdmodfacs> Numero du vecteur CERFACS en lecture: 54
Rdmodfacs> Valeur propre du vecteur en lecture: 18.66
Rdmodfacs> Numero du vecteur CERFACS en lecture: 55
Rdmodfacs> Valeur propre du vecteur en lecture: 18.97
Rdmodfacs> Numero du vecteur CERFACS en lecture: 56
Rdmodfacs> Valeur propre du vecteur en lecture: 19.22
Rdmodfacs> Numero du vecteur CERFACS en lecture: 57
Rdmodfacs> Valeur propre du vecteur en lecture: 19.51
Rdmodfacs> Numero du vecteur CERFACS en lecture: 58
Rdmodfacs> Valeur propre du vecteur en lecture: 19.72
Rdmodfacs> Numero du vecteur CERFACS en lecture: 59
Rdmodfacs> Valeur propre du vecteur en lecture: 19.89
Rdmodfacs> Numero du vecteur CERFACS en lecture: 60
Rdmodfacs> Valeur propre du vecteur en lecture: 19.91
Rdmodfacs> Numero du vecteur CERFACS en lecture: 61
Rdmodfacs> Valeur propre du vecteur en lecture: 20.00
Rdmodfacs> Numero du vecteur CERFACS en lecture: 62
Rdmodfacs> Valeur propre du vecteur en lecture: 20.09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 63
Rdmodfacs> Valeur propre du vecteur en lecture: 20.11
Rdmodfacs> Numero du vecteur CERFACS en lecture: 64
Rdmodfacs> Valeur propre du vecteur en lecture: 20.28
Rdmodfacs> Numero du vecteur CERFACS en lecture: 65
Rdmodfacs> Valeur propre du vecteur en lecture: 20.49
Rdmodfacs> Numero du vecteur CERFACS en lecture: 66
Rdmodfacs> Valeur propre du vecteur en lecture: 20.78
Rdmodfacs> Numero du vecteur CERFACS en lecture: 67
Rdmodfacs> Valeur propre du vecteur en lecture: 21.03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 68
Rdmodfacs> Valeur propre du vecteur en lecture: 21.34
Rdmodfacs> Numero du vecteur CERFACS en lecture: 69
Rdmodfacs> Valeur propre du vecteur en lecture: 21.98
Rdmodfacs> Numero du vecteur CERFACS en lecture: 70
Rdmodfacs> Valeur propre du vecteur en lecture: 23.56
Rdmodfacs> Numero du vecteur CERFACS en lecture: 71
Rdmodfacs> Valeur propre du vecteur en lecture: 25.28
Rdmodfacs> Numero du vecteur CERFACS en lecture: 72
Rdmodfacs> Valeur propre du vecteur en lecture: 25.93
Bfactors> 72 vectors, 72 coordinates in file.
%Bfactors-Wn> All vectors required were not found in vector file.
Openam> file on opening on unit 12:
bfactors.pred
Bfactors> Best zero-eigenvalue found : 0.000000
Bfactors> 49 eigenvalues less than : 0.000000
Bfactors> Lowest non-zero eigenvalue : 14.070000
Bfactors> 23 eigenvectors will be considered.
Bfactors> Rotation-Tranlation modes are skipped.
Bfactors> Mass-weighted B-factors are computed.
(CHARMM units assumed for eigenvalues)
Bfactors> Correlation= -0.496 for 24 C-alpha atoms.
Bfactors> = 0.759 +/- 0.11
Bfactors> = 30.267 +/- 6.25
Bfactors> Shiftng-fct= 29.509
Bfactors> Scaling-fct= 55.525
Bfactors> Predicted, Scaled and Experimental B-factors are saved.
Bfactors> Normal end.
check_modes
Chkmod> Version 1.00, Bordeaux.
Getnam> Eigenvector filename ?
Getnam> 2602140528231840242.eigenfacs
Openam> file on opening on unit 10:
2602140528231840242.eigenfacs
Rdmodfacs> Old Blzpack file format detected.
Rdmodfacs> Numero du vecteur CERFACS en lecture: 1
Rdmodfacs> Frequence du vecteur en lecture: 3.3986E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 2
Rdmodfacs> Frequence du vecteur en lecture: 3.4069E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 3
Rdmodfacs> Frequence du vecteur en lecture: 3.4088E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 4
Rdmodfacs> Frequence du vecteur en lecture: 3.4135E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 5
Rdmodfacs> Frequence du vecteur en lecture: 3.4148E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 6
Rdmodfacs> Frequence du vecteur en lecture: 3.4165E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 7
Rdmodfacs> Frequence du vecteur en lecture: 3.4173E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 8
Rdmodfacs> Frequence du vecteur en lecture: 3.4177E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 9
Rdmodfacs> Frequence du vecteur en lecture: 3.4184E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 10
Rdmodfacs> Frequence du vecteur en lecture: 3.4219E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 11
Rdmodfacs> Frequence du vecteur en lecture: 3.4226E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 12
Rdmodfacs> Frequence du vecteur en lecture: 3.4238E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 13
Rdmodfacs> Frequence du vecteur en lecture: 3.4241E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 14
Rdmodfacs> Frequence du vecteur en lecture: 3.4257E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 15
Rdmodfacs> Frequence du vecteur en lecture: 3.4263E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 16
Rdmodfacs> Frequence du vecteur en lecture: 3.4267E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 17
Rdmodfacs> Frequence du vecteur en lecture: 3.4269E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 18
Rdmodfacs> Frequence du vecteur en lecture: 3.4271E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 19
Rdmodfacs> Frequence du vecteur en lecture: 3.4296E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 20
Rdmodfacs> Frequence du vecteur en lecture: 3.4304E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 21
Rdmodfacs> Frequence du vecteur en lecture: 3.4309E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 22
Rdmodfacs> Frequence du vecteur en lecture: 3.4314E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 23
Rdmodfacs> Frequence du vecteur en lecture: 3.4329E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 24
Rdmodfacs> Frequence du vecteur en lecture: 3.4332E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 25
Rdmodfacs> Frequence du vecteur en lecture: 3.4334E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 26
Rdmodfacs> Frequence du vecteur en lecture: 3.4336E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 27
Rdmodfacs> Frequence du vecteur en lecture: 3.4338E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 28
Rdmodfacs> Frequence du vecteur en lecture: 3.4338E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 29
Rdmodfacs> Frequence du vecteur en lecture: 3.4347E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 30
Rdmodfacs> Frequence du vecteur en lecture: 3.4350E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 31
Rdmodfacs> Frequence du vecteur en lecture: 3.4357E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 32
Rdmodfacs> Frequence du vecteur en lecture: 3.4357E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 33
Rdmodfacs> Frequence du vecteur en lecture: 3.4360E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 34
Rdmodfacs> Frequence du vecteur en lecture: 3.4364E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 35
Rdmodfacs> Frequence du vecteur en lecture: 3.4367E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 36
Rdmodfacs> Frequence du vecteur en lecture: 3.4384E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 37
Rdmodfacs> Frequence du vecteur en lecture: 3.4386E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 38
Rdmodfacs> Frequence du vecteur en lecture: 3.4396E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 39
Rdmodfacs> Frequence du vecteur en lecture: 3.4402E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 40
Rdmodfacs> Frequence du vecteur en lecture: 3.4420E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 41
Rdmodfacs> Frequence du vecteur en lecture: 3.4426E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 42
Rdmodfacs> Frequence du vecteur en lecture: 3.4427E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 43
Rdmodfacs> Frequence du vecteur en lecture: 3.4436E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 44
Rdmodfacs> Frequence du vecteur en lecture: 3.4439E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 45
Rdmodfacs> Frequence du vecteur en lecture: 3.4441E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 46
Rdmodfacs> Frequence du vecteur en lecture: 3.4443E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 47
Rdmodfacs> Frequence du vecteur en lecture: 3.4473E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 48
Rdmodfacs> Frequence du vecteur en lecture: 3.4513E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 49
Rdmodfacs> Frequence du vecteur en lecture: 3.4561E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 50
Rdmodfacs> Frequence du vecteur en lecture: 407.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 51
Rdmodfacs> Frequence du vecteur en lecture: 416.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 52
Rdmodfacs> Frequence du vecteur en lecture: 440.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 53
Rdmodfacs> Frequence du vecteur en lecture: 461.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 54
Rdmodfacs> Frequence du vecteur en lecture: 469.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 55
Rdmodfacs> Frequence du vecteur en lecture: 472.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 56
Rdmodfacs> Frequence du vecteur en lecture: 476.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 57
Rdmodfacs> Frequence du vecteur en lecture: 479.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 58
Rdmodfacs> Frequence du vecteur en lecture: 482.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 59
Rdmodfacs> Frequence du vecteur en lecture: 484.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 60
Rdmodfacs> Frequence du vecteur en lecture: 484.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 61
Rdmodfacs> Frequence du vecteur en lecture: 485.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 62
Rdmodfacs> Frequence du vecteur en lecture: 486.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 63
Rdmodfacs> Frequence du vecteur en lecture: 486.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 64
Rdmodfacs> Frequence du vecteur en lecture: 489.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 65
Rdmodfacs> Frequence du vecteur en lecture: 491.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 66
Rdmodfacs> Frequence du vecteur en lecture: 495.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 67
Rdmodfacs> Frequence du vecteur en lecture: 498.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 68
Rdmodfacs> Frequence du vecteur en lecture: 501.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 69
Rdmodfacs> Frequence du vecteur en lecture: 509.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 70
Rdmodfacs> Frequence du vecteur en lecture: 527.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 71
Rdmodfacs> Frequence du vecteur en lecture: 546.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 72
Rdmodfacs> Frequence du vecteur en lecture: 552.9
Chkmod> 72 vectors, 72 coordinates in file.
Chkmod> That is: 24 cartesian points.
Openam> file on opening on unit 11:
Chkmod.res
Chkmod> Collectivity=f(frequency) to be written in this file.
%Chkmod-Wn> Norm of vector 8 is: 0.9999 (instead of 1.0000).
%Chkmod-Wn> Norm of vector 9 is: 1.0001 (instead of 1.0000).
%Chkmod-Wn> Norm of vector 51 is: 1.0001 (instead of 1.0000).
%Chkmod-Wn> Norm of vector 70 is: 1.0001 (instead of 1.0000).
Chkmod> Normal end.
0.0034 0.1104
0.0034 0.1372
0.0034 0.1090
0.0034 0.1201
0.0034 0.1011
0.0034 0.1876
0.0034 0.1683
0.0034 0.1617
0.0034 0.1479
0.0034 0.3534
0.0034 0.1766
0.0034 0.3604
0.0034 0.2626
0.0034 0.3768
0.0034 0.2597
0.0034 0.1846
0.0034 0.4105
0.0034 0.1066
0.0034 0.4270
0.0034 0.2238
0.0034 0.3694
0.0034 0.2299
0.0034 0.4470
0.0034 0.3729
0.0034 0.0545
0.0034 0.0419
0.0034 0.2549
0.0034 0.0417
0.0034 0.4048
0.0034 0.2885
0.0034 0.1792
0.0034 0.0784
0.0034 0.5329
0.0034 0.1100
0.0034 0.4600
0.0034 0.3998
0.0034 0.4510
0.0034 0.2131
0.0034 0.2250
0.0034 0.1757
0.0034 0.2971
0.0034 0.1048
0.0034 0.3458
0.0034 0.3811
0.0034 0.2600
0.0034 0.2492
0.0034 0.1364
0.0035 0.1390
0.0035 0.1119
407.3087 0.1381
416.6108 0.1641
440.2786 0.1596
460.9502 0.1521
469.0644 0.2261
472.9446 0.2690
476.0508 0.2640
479.6288 0.3474
482.2032 0.3496
484.2772 0.3723
484.5206 0.5356
485.6145 0.1945
486.7059 0.5288
486.9481 0.3660
489.0020 0.3472
491.5273 0.3398
494.9934 0.2573
497.9621 0.2636
501.6188 0.2128
509.0852 0.1433
527.0651 0.1449
545.9655 0.1413
552.9399 0.1162
getting mode 7
running: ../../bin/get_modes.sh 2602140528231840242 7 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 7
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 8
running: ../../bin/get_modes.sh 2602140528231840242 8 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 8
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 9
running: ../../bin/get_modes.sh 2602140528231840242 9 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 9
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 10
running: ../../bin/get_modes.sh 2602140528231840242 10 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 10
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 11
running: ../../bin/get_modes.sh 2602140528231840242 11 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 11
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 12
running: ../../bin/get_modes.sh 2602140528231840242 12 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 12
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 13
running: ../../bin/get_modes.sh 2602140528231840242 13 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 13
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 14
running: ../../bin/get_modes.sh 2602140528231840242 14 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 14
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 15
running: ../../bin/get_modes.sh 2602140528231840242 15 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 15
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 16
running: ../../bin/get_modes.sh 2602140528231840242 16 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 16
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 17
running: ../../bin/get_modes.sh 2602140528231840242 17 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 17
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.17.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.17.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.17.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 18
running: ../../bin/get_modes.sh 2602140528231840242 18 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 18
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.18.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.18.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.18.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 19
running: ../../bin/get_modes.sh 2602140528231840242 19 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 19
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.19.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.19.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.19.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 20
running: ../../bin/get_modes.sh 2602140528231840242 20 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 20
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.20.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.20.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.20.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 21
running: ../../bin/get_modes.sh 2602140528231840242 21 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 21
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.21.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.21.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.21.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 22
running: ../../bin/get_modes.sh 2602140528231840242 22 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 22
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.22.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.22.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.22.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 23
running: ../../bin/get_modes.sh 2602140528231840242 23 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 23
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.23.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.23.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.23.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 24
running: ../../bin/get_modes.sh 2602140528231840242 24 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 24
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.24.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.24.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.24.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 25
running: ../../bin/get_modes.sh 2602140528231840242 25 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 25
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.25.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.25.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.25.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 26
running: ../../bin/get_modes.sh 2602140528231840242 26 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 26
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.26.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.26.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.26.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 27
running: ../../bin/get_modes.sh 2602140528231840242 27 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 27
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.27.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.27.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.27.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 28
running: ../../bin/get_modes.sh 2602140528231840242 28 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 28
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.28.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.28.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.28.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 29
running: ../../bin/get_modes.sh 2602140528231840242 29 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 29
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.29.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.29.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.29.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 30
running: ../../bin/get_modes.sh 2602140528231840242 30 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 30
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.30.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.30.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.30.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 31
running: ../../bin/get_modes.sh 2602140528231840242 31 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 31
calculating perturbed structure for DQ=-100
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=-20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=0
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=20
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=40
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=60
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=80
2602140528231840242.eigenfacs
2602140528231840242.atom
calculating perturbed structure for DQ=100
2602140528231840242.eigenfacs
2602140528231840242.atom
making animated gifs
11 models are in 2602140528231840242.31.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.31.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2602140528231840242.31.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
2602140528231840242.10.pdb
2602140528231840242.11.pdb
2602140528231840242.12.pdb
2602140528231840242.13.pdb
2602140528231840242.14.pdb
2602140528231840242.15.pdb
2602140528231840242.16.pdb
2602140528231840242.17.pdb
2602140528231840242.18.pdb
2602140528231840242.19.pdb
2602140528231840242.20.pdb
2602140528231840242.21.pdb
2602140528231840242.22.pdb
2602140528231840242.23.pdb
2602140528231840242.24.pdb
2602140528231840242.25.pdb
2602140528231840242.26.pdb
2602140528231840242.27.pdb
2602140528231840242.28.pdb
2602140528231840242.29.pdb
2602140528231840242.30.pdb
2602140528231840242.31.pdb
2602140528231840242.7.pdb
2602140528231840242.8.pdb
2602140528231840242.9.pdb
STDERR:
real 0m0.009s
user 0m0.009s
sys 0m0.000s
rm: cannot remove '2602140528231840242.sdijb': No such file or directory
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pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
pstopnm: Writing ppmraw format
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elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.
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