CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN TRANSPORT/IMMUNE SYSTEM 10-JUL-15 5AWW  ***

<R2> analysis for 2602160914402522044

---  normal mode 10  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1188
MET 10.0068
VAL 20.0071
LYS 30.0077
ALA 40.0062
PHE 50.0058
TRP 60.0067
SER 70.0057
ALA 80.0042
LEU 90.0044
GLN 100.0049
ILE 110.0040
PRO 120.0027
GLU 130.0022
LEU 140.0024
ARG 150.0022
GLN 160.0020
ARG 170.0022
VAL 180.0019
LEU 190.0020
PHE 200.0026
THR 210.0027
LEU 220.0029
LEU 230.0030
VAL 240.0032
LEU 250.0036
ALA 260.0036
ALA 270.0044
TYR 280.0036
ARG 290.0021
LEU 300.0041
GLY 310.0031
ALA 320.0022
PHE 330.0027
ILE 340.0031
PRO 350.0037
THR 360.0038
PRO 370.0063
GLY 380.0071
VAL 390.0059
ASP 400.0065
LEU 410.0057
ASP 420.0070
LYS 430.0064
ILE 440.0048
GLN 450.0055
GLU 460.0064
PHE 470.0050
LEU 480.0045
ARG 490.0062
THR 500.0056
ALA 510.0050
GLN 520.0035
GLY 530.0036
GLY 540.0043
VAL 550.0036
PHE 560.0028
GLY 570.0038
ILE 580.0031
ILE 590.0024
ASN 600.0025
LEU 610.0027
PHE 620.0022
SER 630.0020
GLY 640.0021
GLY 650.0017
ASN 660.0012
PHE 670.0016
GLU 680.0023
ARG 690.0023
PHE 700.0025
SER 710.0022
ILE 720.0018
PHE 730.0014
ALA 740.0014
LEU 750.0014
GLY 760.0016
ILE 770.0017
MET 780.0017
PRO 790.0017
TYR 800.0020
ILE 810.0021
THR 820.0021
ALA 830.0026
ALA 840.0029
ILE 850.0023
ILE 860.0040
MET 870.0051
GLN 880.0054
ILE 890.0060
LEU 900.0078
VAL 910.0089
THR 920.0095
VAL 930.0105
VAL 940.0123
PRO 950.0143
ALA 960.0143
LEU 970.0115
GLU 980.0125
LYS 990.0142
LEU 1000.0119
SER 1010.0112
LYS 1020.0133
GLU 1030.0133
GLY 1040.0127
GLU 1050.0112
GLU 1060.0097
GLY 1070.0095
ARG 1080.0086
ARG 1090.0071
ILE 1100.0071
ILE 1110.0071
ASN 1120.0055
GLN 1130.0049
TYR 1140.0054
THR 1150.0043
ARG 1160.0034
ILE 1170.0038
GLY 1180.0038
GLY 1190.0029
ILE 1200.0027
ALA 1210.0033
LEU 1220.0030
GLY 1230.0025
ALA 1240.0034
PHE 1250.0038
GLN 1260.0027
GLY 1270.0031
PHE 1280.0045
PHE 1290.0036
LEU 1300.0030
ALA 1310.0045
THR 1320.0051
ALA 1330.0037
PHE 1340.0033
LEU 1350.0045
GLY 1360.0060
ALA 1370.0050
GLU 1380.0055
GLY 1390.0072
GLY 1400.0070
ARG 1410.0063
PHE 1420.0059
LEU 1430.0072
LEU 1440.0085
PRO 1450.0107
GLY 1460.0113
TRP 1470.0096
SER 1480.0094
PRO 1490.0082
GLY 1500.0089
PRO 1510.0089
PHE 1520.0091
PHE 1530.0076
TRP 1540.0065
PHE 1550.0070
VAL 1560.0064
VAL 1570.0045
VAL 1580.0043
VAL 1590.0044
THR 1600.0031
GLN 1610.0024
VAL 1620.0026
ALA 1630.0020
GLY 1640.0016
ILE 1650.0014
ALA 1660.0017
LEU 1670.0016
LEU 1680.0019
LEU 1690.0022
TRP 1700.0024
MET 1710.0027
ALA 1720.0028
GLU 1730.0031
ARG 1740.0033
ILE 1750.0029
THR 1760.0032
GLU 1770.0036
TYR 1780.0032
GLY 1790.0026
ILE 1800.0023
GLY 1810.0025
ASN 1820.0025
GLY 1830.0025
THR 1840.0022
SER 1850.0022
LEU 1860.0022
ILE 1870.0022
ILE 1880.0022
PHE 1890.0022
ALA 1900.0021
GLY 1910.0021
ILE 1920.0023
VAL 1930.0027
VAL 1940.0032
GLU 1950.0044
TRP 1960.0065
LEU 1970.0088
PRO 1980.0105
GLN 1990.0131
ILE 2000.0146
LEU 2010.0184
ARG 2020.0218
THR 2030.0223
ILE 2040.0264
GLY 2050.0336
LEU 2060.0334
ILE 2070.0335
ARG 2080.0425
THR 2090.0460
GLY 2100.0430
GLU 2110.0369
VAL 2120.0282
ASN 2130.0282
LEU 2140.0261
VAL 2150.0213
ALA 2160.0167
PHE 2170.0175
LEU 2180.0178
PHE 2190.0133
PHE 2200.0105
LEU 2210.0117
ALA 2220.0116
PHE 2230.0071
ILE 2240.0066
VAL 2250.0081
LEU 2260.0066
ALA 2270.0047
PHE 2280.0053
ALA 2290.0057
GLY 2300.0043
MET 2310.0040
ALA 2320.0049
ALA 2330.0046
VAL 2340.0046
GLN 2350.0045
GLN 2360.0058
ALA 2370.0067
GLU 2380.0107
ARG 2390.0112
ARG 2400.0119
ILE 2410.0098
PRO 2420.0079
VAL 2430.0073
GLN 2440.0081
TYR 2450.0129
ALA 2460.0177
ARG 2470.0159
LYS 2480.0257
VAL 2490.0301
VAL 2500.0470
GLY 2510.0593
GLY 2520.0510
ARG 2530.0423
VAL 2540.0267
TYR 2550.0247
GLY 2560.0152
GLY 2570.0179
GLN 2580.0158
ALA 2590.0078
THR 2600.0092
TYR 2610.0098
ILE 2620.0101
PRO 2630.0104
ILE 2640.0105
LYS 2650.0073
LEU 2660.0069
ASN 2670.0056
ALA 2680.0044
ALA 2690.0038
GLY 2700.0024
VAL 2710.0012
ILE 2720.0012
PRO 2730.0016
ILE 2740.0016
ILE 2750.0018
PHE 2760.0021
ALA 2770.0026
ALA 2780.0028
ALA 2790.0027
ILE 2800.0028
LEU 2810.0031
GLN 2820.0032
ILE 2830.0020
PRO 2840.0025
ILE 2850.0024
PHE 2860.0012
LEU 2870.0014
ALA 2880.0014
ALA 2890.0013
PRO 2900.0013
PHE 2910.0014
GLN 2920.0020
ASP 2930.0021
ASN 2940.0007
PRO 2950.0015
VAL 2960.0022
LEU 2970.0018
GLN 2980.0024
GLY 2990.0037
ILE 3000.0037
ALA 3010.0037
ASN 3020.0047
PHE 3030.0053
PHE 3040.0050
ASN 3050.0051
PRO 3060.0052
THR 3070.0068
ARG 3080.0073
PRO 3090.0073
SER 3100.0068
GLY 3110.0058
LEU 3120.0054
PHE 3130.0053
ILE 3140.0051
GLU 3150.0041
VAL 3160.0037
LEU 3170.0044
LEU 3180.0041
VAL 3190.0037
ILE 3200.0044
LEU 3210.0055
PHE 3220.0044
THR 3230.0039
TYR 3240.0053
VAL 3250.0056
TYR 3260.0041
THR 3270.0051
ALA 3280.0066
VAL 3290.0057
GLN 3300.0058
PHE 3310.0092
ASP 3320.0112
PRO 3330.0113
LYS 3340.0135
ARG 3350.0137
ILE 3360.0114
ALA 3370.0106
GLU 3380.0115
SER 3390.0120
LEU 3400.0098
ARG 3410.0082
GLU 3420.0099
TYR 3430.0120
GLY 3440.0091
GLY 3450.0084
PHE 3460.0054
ILE 3470.0056
PRO 3480.0060
GLY 3490.0085
ILE 3500.0085
ARG 3510.0094
PRO 3520.0091
GLY 3530.0106
GLU 3540.0125
PRO 3550.0114
THR 3560.0097
VAL 3570.0109
LYS 3580.0106
PHE 3590.0099
LEU 3600.0099
GLU 3610.0097
HIS 3620.0106
ILE 3630.0109
VAL 3640.0086
SER 3650.0083
ARG 3660.0109
LEU 3670.0096
THR 3680.0068
LEU 3690.0082
TRP 3700.0080
GLY 3710.0053
ALA 3720.0054
LEU 3730.0057
PHE 3740.0038
LEU 3750.0031
GLY 3760.0035
LEU 3770.0024
VAL 3780.0018
THR 3790.0026
LEU 3800.0033
LEU 3810.0030
PRO 3820.0040
GLN 3830.0057
ILE 3840.0060
ILE 3850.0067
GLN 3860.0089
ASN 3870.0103
LEU 3880.0110
THR 3890.0133
GLY 3900.0161
ILE 3910.0133
HIS 3920.0116
SER 3930.0093
ILE 3940.0057
ALA 3950.0047
PHE 3960.0042
SER 3970.0038
GLY 3980.0027
ILE 3990.0026
GLY 4000.0027
LEU 4010.0026
LEU 4020.0018
ILE 4030.0020
VAL 4040.0027
VAL 4050.0032
GLY 4060.0025
VAL 4070.0025
ALA 4080.0033
LEU 4090.0039
ASP 4100.0036
THR 4110.0034
LEU 4120.0044
ARG 4130.0047
GLN 4140.0044
VAL 4150.0045
GLU 4160.0059
SER 4170.0063
GLN 4180.0057
LEU 4190.0059
MET 4200.0076
LEU 4210.0079
ARG 4220.0069
SER 4230.0084
TYR 4240.0103
MET 10.0509
PHE 20.0493
ALA 30.0476
ARG 40.0355
LEU 50.0291
ILE 60.0334
ARG 70.0297
TYR 80.0215
PHE 90.0205
GLN 100.0251
GLU 110.0213
ALA 120.0143
ARG 130.0171
ALA 140.0185
GLU 150.0151
LEU 160.0138
ALA 170.0160
ARG 180.0156
VAL 190.0126
THR 200.0124
TRP 210.0106
PRO 220.0080
THR 230.0080
ARG 240.0062
GLU 250.0085
GLN 260.0079
VAL 270.0056
VAL 280.0071
GLU 290.0077
GLY 300.0062
THR 310.0061
GLN 320.0069
ALA 330.0061
ILE 340.0050
LEU 350.0056
LEU 360.0059
PHE 370.0049
THR 380.0046
LEU 390.0058
ALA 400.0053
PHE 410.0041
MET 420.0047
VAL 430.0044
ILE 440.0031
LEU 450.0022
GLY 460.0027
LEU 470.0016
TYR 480.0029
ASP 490.0054
THR 500.0096
VAL 510.0141
PHE 520.0163
ARG 530.0219
PHE 540.0286
LEU 550.0444
ILE 560.0471
GLY 570.0643
LEU 580.0795
LEU 590.1036
ARG 600.1188
MET 10.0179
ASP 20.0173
LEU 30.0168
LEU 40.0151
TYR 50.0132
THR 60.0129
LEU 70.0117
VAL 80.0100
ILE 90.0090
LEU 100.0091
PHE 110.0073
TYR 120.0060
LEU 130.0062
GLY 140.0056
VAL 150.0038
ALA 160.0035
GLY 170.0039
LEU 180.0031
LEU 190.0020
VAL 200.0026
TYR 210.0029
LEU 220.0021
VAL 230.0022
LEU 240.0030
VAL 250.0033
GLN 260.0032
GLU 270.0041
PRO 280.0045
LYS 290.0059
GLN 300.0067
GLY 310.0091
ALA 320.0088
GLY 330.0048
ASP 340.0020
LEU 350.0018
MET 360.0021
GLY 370.0028
GLY 380.0038
SER 390.0045
ALA 400.0034
ASP 410.0039
LEU 420.0040
PHE 430.0032
SER 440.0042
ALA 450.0045
ARG 460.0054
GLY 470.0049
VAL 480.0045
THR 490.0036
GLY 500.0037
GLY 510.0032
LEU 520.0025
TYR 530.0029
ARG 540.0030
LEU 550.0022
THR 560.0020
VAL 570.0027
ILE 580.0030
LEU 590.0024
GLY 600.0024
VAL 610.0037
VAL 620.0039
PHE 630.0034
ALA 640.0040
ALA 650.0057
LEU 660.0059
ALA 670.0052
LEU 680.0070
VAL 690.0083
ILE 700.0087
GLY 710.0088
LEU 720.0110
TRP 730.0123
PRO 740.0146
ARG 750.0150

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.