CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN TRANSPORT/IMMUNE SYSTEM 10-JUL-15 5AWW  ***

<R2> analysis for 2602160914402522044

---  normal mode 106  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0534
MET 10.0142
VAL 20.0168
LYS 30.0204
ALA 40.0154
PHE 50.0143
TRP 60.0203
SER 70.0236
ALA 80.0193
LEU 90.0172
GLN 100.0312
ILE 110.0296
PRO 120.0220
GLU 130.0075
LEU 140.0104
ARG 150.0092
GLN 160.0046
ARG 170.0046
VAL 180.0068
LEU 190.0037
PHE 200.0053
THR 210.0073
LEU 220.0082
LEU 230.0112
VAL 240.0092
LEU 250.0069
ALA 260.0098
ALA 270.0156
TYR 280.0139
ARG 290.0144
LEU 300.0178
GLY 310.0186
ALA 320.0180
PHE 330.0202
ILE 340.0093
PRO 350.0074
THR 360.0074
PRO 370.0130
GLY 380.0096
VAL 390.0086
ASP 400.0113
LEU 410.0070
ASP 420.0086
LYS 430.0078
ILE 440.0058
GLN 450.0041
GLU 460.0107
PHE 470.0105
LEU 480.0063
ARG 490.0412
THR 500.0469
ALA 510.0534
GLN 520.0187
GLY 530.0128
GLY 540.0144
VAL 550.0107
PHE 560.0069
GLY 570.0065
ILE 580.0028
ILE 590.0026
ASN 600.0033
LEU 610.0039
PHE 620.0054
SER 630.0053
GLY 640.0083
GLY 650.0098
ASN 660.0101
PHE 670.0062
GLU 680.0102
ARG 690.0112
PHE 700.0088
SER 710.0101
ILE 720.0098
PHE 730.0085
ALA 740.0076
LEU 750.0076
GLY 760.0076
ILE 770.0075
MET 780.0086
PRO 790.0117
TYR 800.0099
ILE 810.0112
THR 820.0163
ALA 830.0111
ALA 840.0106
ILE 850.0139
ILE 860.0103
MET 870.0028
GLN 880.0078
ILE 890.0071
LEU 900.0061
VAL 910.0091
THR 920.0069
VAL 930.0068
VAL 940.0080
PRO 950.0043
ALA 960.0047
LEU 970.0074
GLU 980.0072
LYS 990.0076
LEU 1000.0043
SER 1010.0158
LYS 1020.0174
GLU 1030.0070
GLY 1040.0072
GLU 1050.0031
GLU 1060.0050
GLY 1070.0064
ARG 1080.0056
ARG 1090.0033
ILE 1100.0074
ILE 1110.0117
ASN 1120.0082
GLN 1130.0032
TYR 1140.0050
THR 1150.0041
ARG 1160.0037
ILE 1170.0037
GLY 1180.0078
GLY 1190.0068
ILE 1200.0031
ALA 1210.0109
LEU 1220.0142
GLY 1230.0099
ALA 1240.0116
PHE 1250.0151
GLN 1260.0150
GLY 1270.0103
PHE 1280.0107
PHE 1290.0119
LEU 1300.0104
ALA 1310.0091
THR 1320.0124
ALA 1330.0069
PHE 1340.0066
LEU 1350.0067
GLY 1360.0123
ALA 1370.0189
GLU 1380.0259
GLY 1390.0251
GLY 1400.0180
ARG 1410.0145
PHE 1420.0067
LEU 1430.0073
LEU 1440.0104
PRO 1450.0210
GLY 1460.0223
TRP 1470.0201
SER 1480.0245
PRO 1490.0220
GLY 1500.0286
PRO 1510.0244
PHE 1520.0232
PHE 1530.0146
TRP 1540.0082
PHE 1550.0102
VAL 1560.0115
VAL 1570.0054
VAL 1580.0037
VAL 1590.0095
THR 1600.0100
GLN 1610.0078
VAL 1620.0077
ALA 1630.0096
GLY 1640.0105
ILE 1650.0087
ALA 1660.0072
LEU 1670.0078
LEU 1680.0078
LEU 1690.0020
TRP 1700.0018
MET 1710.0017
ALA 1720.0043
GLU 1730.0049
ARG 1740.0047
ILE 1750.0064
THR 1760.0080
GLU 1770.0085
TYR 1780.0092
GLY 1790.0073
ILE 1800.0073
GLY 1810.0031
ASN 1820.0054
GLY 1830.0079
THR 1840.0051
SER 1850.0033
LEU 1860.0031
ILE 1870.0052
ILE 1880.0052
PHE 1890.0052
ALA 1900.0044
GLY 1910.0038
ILE 1920.0037
VAL 1930.0055
VAL 1940.0076
GLU 1950.0089
TRP 1960.0132
LEU 1970.0197
PRO 1980.0272
GLN 1990.0189
ILE 2000.0085
LEU 2010.0185
ARG 2020.0209
THR 2030.0253
ILE 2040.0251
GLY 2050.0277
LEU 2060.0236
ILE 2070.0220
ARG 2080.0325
THR 2090.0216
GLY 2100.0143
GLU 2110.0199
VAL 2120.0180
ASN 2130.0134
LEU 2140.0044
VAL 2150.0160
ALA 2160.0176
PHE 2170.0105
LEU 2180.0118
PHE 2190.0101
PHE 2200.0148
LEU 2210.0256
ALA 2220.0293
PHE 2230.0206
ILE 2240.0186
VAL 2250.0266
LEU 2260.0323
ALA 2270.0240
PHE 2280.0196
ALA 2290.0222
GLY 2300.0255
MET 2310.0237
ALA 2320.0184
ALA 2330.0100
VAL 2340.0118
GLN 2350.0081
GLN 2360.0091
ALA 2370.0112
GLU 2380.0081
ARG 2390.0037
ARG 2400.0080
ILE 2410.0072
PRO 2420.0103
VAL 2430.0056
GLN 2440.0055
TYR 2450.0064
ALA 2460.0069
ARG 2470.0125
LYS 2480.0136
VAL 2490.0105
VAL 2500.0071
GLY 2510.0146
GLY 2520.0124
ARG 2530.0034
VAL 2540.0124
TYR 2550.0140
GLY 2560.0145
GLY 2570.0082
GLN 2580.0107
ALA 2590.0219
THR 2600.0226
TYR 2610.0209
ILE 2620.0130
PRO 2630.0116
ILE 2640.0091
LYS 2650.0042
LEU 2660.0044
ASN 2670.0028
ALA 2680.0026
ALA 2690.0080
GLY 2700.0112
VAL 2710.0119
ILE 2720.0113
PRO 2730.0105
ILE 2740.0124
ILE 2750.0128
PHE 2760.0119
ALA 2770.0150
ALA 2780.0128
ALA 2790.0110
ILE 2800.0140
LEU 2810.0112
GLN 2820.0075
ILE 2830.0115
PRO 2840.0149
ILE 2850.0117
PHE 2860.0113
LEU 2870.0101
ALA 2880.0134
ALA 2890.0105
PRO 2900.0074
PHE 2910.0013
GLN 2920.0094
ASP 2930.0223
ASN 2940.0249
PRO 2950.0323
VAL 2960.0335
LEU 2970.0218
GLN 2980.0120
GLY 2990.0152
ILE 3000.0228
ALA 3010.0227
ASN 3020.0226
PHE 3030.0199
PHE 3040.0096
ASN 3050.0090
PRO 3060.0075
THR 3070.0132
ARG 3080.0123
PRO 3090.0141
SER 3100.0052
GLY 3110.0057
LEU 3120.0111
PHE 3130.0274
ILE 3140.0244
GLU 3150.0171
VAL 3160.0197
LEU 3170.0203
LEU 3180.0175
VAL 3190.0119
ILE 3200.0079
LEU 3210.0107
PHE 3220.0089
THR 3230.0043
TYR 3240.0043
VAL 3250.0108
TYR 3260.0044
THR 3270.0042
ALA 3280.0095
VAL 3290.0056
GLN 3300.0058
PHE 3310.0063
ASP 3320.0063
PRO 3330.0081
LYS 3340.0115
ARG 3350.0099
ILE 3360.0119
ALA 3370.0170
GLU 3380.0179
SER 3390.0126
LEU 3400.0103
ARG 3410.0115
GLU 3420.0092
TYR 3430.0066
GLY 3440.0034
GLY 3450.0094
PHE 3460.0060
ILE 3470.0072
PRO 3480.0082
GLY 3490.0141
ILE 3500.0032
ARG 3510.0086
PRO 3520.0091
GLY 3530.0230
GLU 3540.0226
PRO 3550.0040
THR 3560.0076
VAL 3570.0106
LYS 3580.0064
PHE 3590.0068
LEU 3600.0085
GLU 3610.0058
HIS 3620.0050
ILE 3630.0056
VAL 3640.0059
SER 3650.0069
ARG 3660.0084
LEU 3670.0069
THR 3680.0059
LEU 3690.0064
TRP 3700.0038
GLY 3710.0038
ALA 3720.0038
LEU 3730.0030
PHE 3740.0038
LEU 3750.0030
GLY 3760.0087
LEU 3770.0123
VAL 3780.0082
THR 3790.0102
LEU 3800.0102
LEU 3810.0124
PRO 3820.0058
GLN 3830.0079
ILE 3840.0085
ILE 3850.0080
GLN 3860.0087
ASN 3870.0062
LEU 3880.0057
THR 3890.0091
GLY 3900.0099
ILE 3910.0112
HIS 3920.0119
SER 3930.0163
ILE 3940.0110
ALA 3950.0076
PHE 3960.0092
SER 3970.0081
GLY 3980.0090
ILE 3990.0067
GLY 4000.0059
LEU 4010.0069
LEU 4020.0080
ILE 4030.0084
VAL 4040.0070
VAL 4050.0105
GLY 4060.0112
VAL 4070.0102
ALA 4080.0093
LEU 4090.0080
ASP 4100.0106
THR 4110.0083
LEU 4120.0079
ARG 4130.0080
GLN 4140.0087
VAL 4150.0115
GLU 4160.0105
SER 4170.0192
GLN 4180.0171
LEU 4190.0124
MET 4200.0164
LEU 4210.0210
ARG 4220.0142
SER 4230.0213
TYR 4240.0270
MET 10.0109
PHE 20.0168
ALA 30.0185
ARG 40.0120
LEU 50.0112
ILE 60.0133
ARG 70.0098
TYR 80.0084
PHE 90.0095
GLN 100.0073
GLU 110.0081
ALA 120.0094
ARG 130.0088
ALA 140.0085
GLU 150.0066
LEU 160.0049
ALA 170.0091
ARG 180.0093
VAL 190.0044
THR 200.0047
TRP 210.0136
PRO 220.0327
THR 230.0180
ARG 240.0177
GLU 250.0337
GLN 260.0229
VAL 270.0235
VAL 280.0291
GLU 290.0172
GLY 300.0185
THR 310.0233
GLN 320.0163
ALA 330.0138
ILE 340.0113
LEU 350.0086
LEU 360.0064
PHE 370.0048
THR 380.0022
LEU 390.0074
ALA 400.0120
PHE 410.0080
MET 420.0096
VAL 430.0175
ILE 440.0118
LEU 450.0037
GLY 460.0106
LEU 470.0060
TYR 480.0071
ASP 490.0131
THR 500.0094
VAL 510.0108
PHE 520.0152
ARG 530.0149
PHE 540.0099
LEU 550.0118
ILE 560.0089
GLY 570.0133
LEU 580.0136
LEU 590.0133
ARG 600.0102
MET 10.0178
ASP 20.0122
LEU 30.0158
LEU 40.0113
TYR 50.0078
THR 60.0103
LEU 70.0098
VAL 80.0051
ILE 90.0065
LEU 100.0279
PHE 110.0262
TYR 120.0147
LEU 130.0151
GLY 140.0169
VAL 150.0138
ALA 160.0119
GLY 170.0141
LEU 180.0104
LEU 190.0082
VAL 200.0084
TYR 210.0043
LEU 220.0030
VAL 230.0036
LEU 240.0031
VAL 250.0075
GLN 260.0074
GLU 270.0084
PRO 280.0204
LYS 290.0234
GLN 300.0160
GLY 310.0202
ALA 320.0363
GLY 330.0469
ASP 340.0291
LEU 350.0217
MET 360.0133
GLY 370.0074
GLY 380.0075
SER 390.0090
ALA 400.0056
ASP 410.0062
LEU 420.0217
PHE 430.0373
SER 440.0296
ALA 450.0311
ARG 460.0366
GLY 470.0325
VAL 480.0220
THR 490.0126
GLY 500.0121
GLY 510.0098
LEU 520.0066
TYR 530.0063
ARG 540.0025
LEU 550.0019
THR 560.0048
VAL 570.0030
ILE 580.0051
LEU 590.0087
GLY 600.0076
VAL 610.0040
VAL 620.0096
PHE 630.0086
ALA 640.0040
ALA 650.0073
LEU 660.0071
ALA 670.0044
LEU 680.0059
VAL 690.0070
ILE 700.0056
GLY 710.0206
LEU 720.0208
TRP 730.0098
PRO 740.0161
ARG 750.0188

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.