CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN TRANSPORT/IMMUNE SYSTEM 10-JUL-15 5AWW  ***

<R2> analysis for 2602160914402522044

---  normal mode 22  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0680
MET 10.0102
VAL 20.0094
LYS 30.0124
ALA 40.0114
PHE 50.0089
TRP 60.0109
SER 70.0138
ALA 80.0117
LEU 90.0125
GLN 100.0167
ILE 110.0176
PRO 120.0190
GLU 130.0161
LEU 140.0125
ARG 150.0136
GLN 160.0140
ARG 170.0095
VAL 180.0086
LEU 190.0113
PHE 200.0102
THR 210.0078
LEU 220.0079
LEU 230.0099
VAL 240.0094
LEU 250.0077
ALA 260.0084
ALA 270.0091
TYR 280.0082
ARG 290.0081
LEU 300.0081
GLY 310.0085
ALA 320.0080
PHE 330.0068
ILE 340.0079
PRO 350.0066
THR 360.0065
PRO 370.0080
GLY 380.0103
VAL 390.0087
ASP 400.0111
LEU 410.0092
ASP 420.0132
LYS 430.0133
ILE 440.0099
GLN 450.0120
GLU 460.0153
PHE 470.0123
LEU 480.0121
ARG 490.0170
THR 500.0155
ALA 510.0153
GLN 520.0114
GLY 530.0094
GLY 540.0123
VAL 550.0115
PHE 560.0085
GLY 570.0094
ILE 580.0088
ILE 590.0085
ASN 600.0071
LEU 610.0069
PHE 620.0077
SER 630.0078
GLY 640.0077
GLY 650.0069
ASN 660.0070
PHE 670.0064
GLU 680.0068
ARG 690.0057
PHE 700.0063
SER 710.0067
ILE 720.0077
PHE 730.0083
ALA 740.0076
LEU 750.0084
GLY 760.0088
ILE 770.0092
MET 780.0094
PRO 790.0104
TYR 800.0097
ILE 810.0092
THR 820.0115
ALA 830.0109
ALA 840.0081
ILE 850.0116
ILE 860.0156
MET 870.0108
GLN 880.0166
ILE 890.0261
LEU 900.0216
VAL 910.0262
THR 920.0391
VAL 930.0357
VAL 940.0237
PRO 950.0328
ALA 960.0273
LEU 970.0232
GLU 980.0375
LYS 990.0438
LEU 1000.0360
SER 1010.0375
LYS 1020.0521
GLU 1030.0529
GLY 1040.0506
GLU 1050.0445
GLU 1060.0360
GLY 1070.0294
ARG 1080.0238
ARG 1090.0172
ILE 1100.0142
ILE 1110.0094
ASN 1120.0062
GLN 1130.0060
TYR 1140.0057
THR 1150.0066
ARG 1160.0071
ILE 1170.0082
GLY 1180.0099
GLY 1190.0096
ILE 1200.0097
ALA 1210.0112
LEU 1220.0106
GLY 1230.0101
ALA 1240.0097
PHE 1250.0092
GLN 1260.0081
GLY 1270.0062
PHE 1280.0066
PHE 1290.0050
LEU 1300.0044
ALA 1310.0056
THR 1320.0064
ALA 1330.0047
PHE 1340.0049
LEU 1350.0070
GLY 1360.0105
ALA 1370.0097
GLU 1380.0124
GLY 1390.0158
GLY 1400.0139
ARG 1410.0136
PHE 1420.0114
LEU 1430.0128
LEU 1440.0148
PRO 1450.0194
GLY 1460.0204
TRP 1470.0182
SER 1480.0164
PRO 1490.0149
GLY 1500.0157
PRO 1510.0155
PHE 1520.0153
PHE 1530.0121
TRP 1540.0105
PHE 1550.0109
VAL 1560.0095
VAL 1570.0068
VAL 1580.0073
VAL 1590.0086
THR 1600.0075
GLN 1610.0075
VAL 1620.0091
ALA 1630.0090
GLY 1640.0088
ILE 1650.0096
ALA 1660.0089
LEU 1670.0091
LEU 1680.0092
LEU 1690.0081
TRP 1700.0081
MET 1710.0078
ALA 1720.0077
GLU 1730.0072
ARG 1740.0071
ILE 1750.0062
THR 1760.0048
GLU 1770.0052
TYR 1780.0063
GLY 1790.0060
ILE 1800.0044
GLY 1810.0027
ASN 1820.0041
GLY 1830.0067
THR 1840.0067
SER 1850.0053
LEU 1860.0050
ILE 1870.0066
ILE 1880.0064
PHE 1890.0051
ALA 1900.0057
GLY 1910.0066
ILE 1920.0058
VAL 1930.0053
VAL 1940.0059
GLU 1950.0059
TRP 1960.0053
LEU 1970.0075
PRO 1980.0089
GLN 1990.0088
ILE 2000.0097
LEU 2010.0155
ARG 2020.0183
THR 2030.0114
ILE 2040.0184
GLY 2050.0322
LEU 2060.0267
ILE 2070.0166
ARG 2080.0350
THR 2090.0411
GLY 2100.0283
GLU 2110.0313
VAL 2120.0172
ASN 2130.0126
LEU 2140.0139
VAL 2150.0251
ALA 2160.0227
PHE 2170.0139
LEU 2180.0199
PHE 2190.0235
PHE 2200.0156
LEU 2210.0136
ALA 2220.0189
PHE 2230.0147
ILE 2240.0109
VAL 2250.0118
LEU 2260.0133
ALA 2270.0103
PHE 2280.0072
ALA 2290.0096
GLY 2300.0089
MET 2310.0055
ALA 2320.0058
ALA 2330.0066
VAL 2340.0040
GLN 2350.0026
GLN 2360.0049
ALA 2370.0029
GLU 2380.0035
ARG 2390.0048
ARG 2400.0059
ILE 2410.0086
PRO 2420.0107
VAL 2430.0094
GLN 2440.0097
TYR 2450.0086
ALA 2460.0092
ARG 2470.0060
LYS 2480.0079
VAL 2490.0110
VAL 2500.0211
GLY 2510.0304
GLY 2520.0286
ARG 2530.0194
VAL 2540.0114
TYR 2550.0067
GLY 2560.0075
GLY 2570.0122
GLN 2580.0162
ALA 2590.0161
THR 2600.0121
TYR 2610.0085
ILE 2620.0062
PRO 2630.0047
ILE 2640.0040
LYS 2650.0031
LEU 2660.0024
ASN 2670.0036
ALA 2680.0041
ALA 2690.0028
GLY 2700.0033
VAL 2710.0043
ILE 2720.0059
PRO 2730.0068
ILE 2740.0068
ILE 2750.0065
PHE 2760.0083
ALA 2770.0101
ALA 2780.0077
ALA 2790.0084
ILE 2800.0115
LEU 2810.0112
GLN 2820.0106
ILE 2830.0123
PRO 2840.0136
ILE 2850.0113
PHE 2860.0085
LEU 2870.0106
ALA 2880.0106
ALA 2890.0074
PRO 2900.0043
PHE 2910.0045
GLN 2920.0055
ASP 2930.0049
ASN 2940.0080
PRO 2950.0136
VAL 2960.0166
LEU 2970.0139
GLN 2980.0127
GLY 2990.0182
ILE 3000.0186
ALA 3010.0152
ASN 3020.0161
PHE 3030.0189
PHE 3040.0164
ASN 3050.0148
PRO 3060.0137
THR 3070.0157
ARG 3080.0173
PRO 3090.0185
SER 3100.0191
GLY 3110.0173
LEU 3120.0153
PHE 3130.0171
ILE 3140.0169
GLU 3150.0135
VAL 3160.0126
LEU 3170.0143
LEU 3180.0132
VAL 3190.0098
ILE 3200.0095
LEU 3210.0112
PHE 3220.0099
THR 3230.0076
TYR 3240.0071
VAL 3250.0088
TYR 3260.0077
THR 3270.0064
ALA 3280.0066
VAL 3290.0078
GLN 3300.0073
PHE 3310.0054
ASP 3320.0062
PRO 3330.0063
LYS 3340.0092
ARG 3350.0086
ILE 3360.0057
ALA 3370.0061
GLU 3380.0083
SER 3390.0076
LEU 3400.0045
ARG 3410.0054
GLU 3420.0084
TYR 3430.0078
GLY 3440.0046
GLY 3450.0051
PHE 3460.0048
ILE 3470.0085
PRO 3480.0120
GLY 3490.0168
ILE 3500.0137
ARG 3510.0139
PRO 3520.0101
GLY 3530.0124
GLU 3540.0143
PRO 3550.0141
THR 3560.0102
VAL 3570.0097
LYS 3580.0112
PHE 3590.0101
LEU 3600.0072
GLU 3610.0073
HIS 3620.0074
ILE 3630.0060
VAL 3640.0046
SER 3650.0048
ARG 3660.0039
LEU 3670.0034
THR 3680.0043
LEU 3690.0047
TRP 3700.0040
GLY 3710.0048
ALA 3720.0058
LEU 3730.0076
PHE 3740.0064
LEU 3750.0064
GLY 3760.0091
LEU 3770.0100
VAL 3780.0090
THR 3790.0096
LEU 3800.0129
LEU 3810.0140
PRO 3820.0133
GLN 3830.0160
ILE 3840.0187
ILE 3850.0191
GLN 3860.0182
ASN 3870.0228
LEU 3880.0271
THR 3890.0225
GLY 3900.0223
ILE 3910.0168
HIS 3920.0162
SER 3930.0127
ILE 3940.0090
ALA 3950.0073
PHE 3960.0069
SER 3970.0094
GLY 3980.0084
ILE 3990.0078
GLY 4000.0070
LEU 4010.0057
LEU 4020.0052
ILE 4030.0046
VAL 4040.0030
VAL 4050.0022
GLY 4060.0025
VAL 4070.0019
ALA 4080.0004
LEU 4090.0022
ASP 4100.0016
THR 4110.0027
LEU 4120.0052
ARG 4130.0057
GLN 4140.0057
VAL 4150.0085
GLU 4160.0102
SER 4170.0121
GLN 4180.0124
LEU 4190.0154
MET 4200.0179
LEU 4210.0196
ARG 4220.0206
SER 4230.0238
TYR 4240.0287
MET 10.0078
PHE 20.0094
ALA 30.0088
ARG 40.0055
LEU 50.0056
ILE 60.0071
ARG 70.0053
TYR 80.0042
PHE 90.0050
GLN 100.0054
GLU 110.0046
ALA 120.0041
ARG 130.0046
ALA 140.0048
GLU 150.0043
LEU 160.0033
ALA 170.0037
ARG 180.0038
VAL 190.0024
THR 200.0030
TRP 210.0029
PRO 220.0097
THR 230.0204
ARG 240.0242
GLU 250.0213
GLN 260.0152
VAL 270.0128
VAL 280.0146
GLU 290.0125
GLY 300.0087
THR 310.0086
GLN 320.0086
ALA 330.0064
ILE 340.0041
LEU 350.0043
LEU 360.0037
PHE 370.0021
THR 380.0013
LEU 390.0015
ALA 400.0042
PHE 410.0050
MET 420.0048
VAL 430.0056
ILE 440.0063
LEU 450.0068
GLY 460.0066
LEU 470.0069
TYR 480.0078
ASP 490.0077
THR 500.0070
VAL 510.0065
PHE 520.0063
ARG 530.0054
PHE 540.0043
LEU 550.0038
ILE 560.0057
GLY 570.0094
LEU 580.0162
LEU 590.0116
ARG 600.0272
MET 10.0640
ASP 20.0650
LEU 30.0680
LEU 40.0549
TYR 50.0371
THR 60.0370
LEU 70.0370
VAL 80.0278
ILE 90.0172
LEU 100.0200
PHE 110.0221
TYR 120.0146
LEU 130.0082
GLY 140.0115
VAL 150.0127
ALA 160.0087
GLY 170.0068
LEU 180.0074
LEU 190.0081
VAL 200.0075
TYR 210.0072
LEU 220.0064
VAL 230.0067
LEU 240.0069
VAL 250.0045
GLN 260.0052
GLU 270.0060
PRO 280.0050
LYS 290.0058
GLN 300.0070
GLY 310.0109
ALA 320.0199
GLY 330.0176
ASP 340.0049
LEU 350.0050
MET 360.0053
GLY 370.0032
GLY 380.0041
SER 390.0074
ALA 400.0091
ASP 410.0129
LEU 420.0134
PHE 430.0136
SER 440.0099
ALA 450.0120
ARG 460.0077
GLY 470.0101
VAL 480.0086
THR 490.0074
GLY 500.0070
GLY 510.0065
LEU 520.0059
TYR 530.0063
ARG 540.0060
LEU 550.0065
THR 560.0069
VAL 570.0087
ILE 580.0097
LEU 590.0099
GLY 600.0116
VAL 610.0156
VAL 620.0143
PHE 630.0116
ALA 640.0140
ALA 650.0156
LEU 660.0138
ALA 670.0104
LEU 680.0125
VAL 690.0147
ILE 700.0118
GLY 710.0093
LEU 720.0127
TRP 730.0158
PRO 740.0164
ARG 750.0220

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.