CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN TRANSPORT/IMMUNE SYSTEM 10-JUL-15 5AWW  ***

<R2> analysis for 2602160914402522044

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0838
MET 10.0052
VAL 20.0050
LYS 30.0057
ALA 40.0047
PHE 50.0039
TRP 60.0051
SER 70.0055
ALA 80.0022
LEU 90.0059
GLN 100.0082
ILE 110.0039
PRO 120.0069
GLU 130.0078
LEU 140.0055
ARG 150.0080
GLN 160.0129
ARG 170.0101
VAL 180.0093
LEU 190.0112
PHE 200.0101
THR 210.0079
LEU 220.0085
LEU 230.0086
VAL 240.0064
LEU 250.0055
ALA 260.0073
ALA 270.0060
TYR 280.0047
ARG 290.0063
LEU 300.0067
GLY 310.0063
ALA 320.0061
PHE 330.0072
ILE 340.0068
PRO 350.0072
THR 360.0072
PRO 370.0145
GLY 380.0173
VAL 390.0141
ASP 400.0175
LEU 410.0162
ASP 420.0204
LYS 430.0161
ILE 440.0127
GLN 450.0175
GLU 460.0189
PHE 470.0138
LEU 480.0153
ARG 490.0216
THR 500.0183
ALA 510.0187
GLN 520.0138
GLY 530.0131
GLY 540.0164
VAL 550.0131
PHE 560.0109
GLY 570.0131
ILE 580.0109
ILE 590.0095
ASN 600.0096
LEU 610.0099
PHE 620.0084
SER 630.0073
GLY 640.0084
GLY 650.0092
ASN 660.0063
PHE 670.0067
GLU 680.0094
ARG 690.0093
PHE 700.0055
SER 710.0059
ILE 720.0052
PHE 730.0035
ALA 740.0036
LEU 750.0037
GLY 760.0040
ILE 770.0036
MET 780.0047
PRO 790.0036
TYR 800.0031
ILE 810.0044
THR 820.0056
ALA 830.0053
ALA 840.0052
ILE 850.0046
ILE 860.0044
MET 870.0044
GLN 880.0015
ILE 890.0056
LEU 900.0091
VAL 910.0077
THR 920.0143
VAL 930.0202
VAL 940.0224
PRO 950.0230
ALA 960.0225
LEU 970.0129
GLU 980.0097
LYS 990.0120
LEU 1000.0112
SER 1010.0038
LYS 1020.0036
GLU 1030.0131
GLY 1040.0153
GLU 1050.0199
GLU 1060.0174
GLY 1070.0119
ARG 1080.0077
ARG 1090.0068
ILE 1100.0060
ILE 1110.0047
ASN 1120.0027
GLN 1130.0019
TYR 1140.0031
THR 1150.0031
ARG 1160.0019
ILE 1170.0045
GLY 1180.0046
GLY 1190.0026
ILE 1200.0027
ALA 1210.0049
LEU 1220.0042
GLY 1230.0014
ALA 1240.0041
PHE 1250.0057
GLN 1260.0026
GLY 1270.0036
PHE 1280.0076
PHE 1290.0056
LEU 1300.0040
ALA 1310.0088
THR 1320.0109
ALA 1330.0073
PHE 1340.0051
LEU 1350.0090
GLY 1360.0150
ALA 1370.0108
GLU 1380.0110
GLY 1390.0181
GLY 1400.0176
ARG 1410.0142
PHE 1420.0134
LEU 1430.0182
LEU 1440.0235
PRO 1450.0332
GLY 1460.0308
TRP 1470.0267
SER 1480.0263
PRO 1490.0226
GLY 1500.0233
PRO 1510.0182
PHE 1520.0169
PHE 1530.0158
TRP 1540.0136
PHE 1550.0114
VAL 1560.0113
VAL 1570.0091
VAL 1580.0073
VAL 1590.0080
THR 1600.0073
GLN 1610.0044
VAL 1620.0044
ALA 1630.0059
GLY 1640.0050
ILE 1650.0034
ALA 1660.0038
LEU 1670.0050
LEU 1680.0040
LEU 1690.0020
TRP 1700.0041
MET 1710.0041
ALA 1720.0020
GLU 1730.0039
ARG 1740.0048
ILE 1750.0050
THR 1760.0049
GLU 1770.0071
TYR 1780.0090
GLY 1790.0075
ILE 1800.0062
GLY 1810.0029
ASN 1820.0022
GLY 1830.0027
THR 1840.0031
SER 1850.0033
LEU 1860.0042
ILE 1870.0044
ILE 1880.0052
PHE 1890.0053
ALA 1900.0061
GLY 1910.0072
ILE 1920.0086
VAL 1930.0082
VAL 1940.0108
GLU 1950.0128
TRP 1960.0153
LEU 1970.0187
PRO 1980.0229
GLN 1990.0205
ILE 2000.0193
LEU 2010.0269
ARG 2020.0235
THR 2030.0112
ILE 2040.0207
GLY 2050.0244
LEU 2060.0054
ILE 2070.0196
ARG 2080.0307
THR 2090.0082
GLY 2100.0257
GLU 2110.0260
VAL 2120.0252
ASN 2130.0428
LEU 2140.0492
VAL 2150.0560
ALA 2160.0379
PHE 2170.0278
LEU 2180.0418
PHE 2190.0348
PHE 2200.0181
LEU 2210.0260
ALA 2220.0289
PHE 2230.0112
ILE 2240.0125
VAL 2250.0154
LEU 2260.0094
ALA 2270.0079
PHE 2280.0110
ALA 2290.0093
GLY 2300.0087
MET 2310.0086
ALA 2320.0070
ALA 2330.0063
VAL 2340.0048
GLN 2350.0046
GLN 2360.0042
ALA 2370.0043
GLU 2380.0068
ARG 2390.0067
ARG 2400.0065
ILE 2410.0046
PRO 2420.0029
VAL 2430.0035
GLN 2440.0049
TYR 2450.0064
ALA 2460.0094
ARG 2470.0111
LYS 2480.0117
VAL 2490.0090
VAL 2500.0073
GLY 2510.0106
GLY 2520.0110
ARG 2530.0123
VAL 2540.0090
TYR 2550.0017
GLY 2560.0071
GLY 2570.0067
GLN 2580.0053
ALA 2590.0043
THR 2600.0021
TYR 2610.0027
ILE 2620.0047
PRO 2630.0055
ILE 2640.0067
LYS 2650.0051
LEU 2660.0051
ASN 2670.0050
ALA 2680.0044
ALA 2690.0055
GLY 2700.0056
VAL 2710.0061
ILE 2720.0061
PRO 2730.0063
ILE 2740.0064
ILE 2750.0065
PHE 2760.0065
ALA 2770.0080
ALA 2780.0085
ALA 2790.0080
ILE 2800.0087
LEU 2810.0095
GLN 2820.0092
ILE 2830.0085
PRO 2840.0098
ILE 2850.0096
PHE 2860.0069
LEU 2870.0069
ALA 2880.0077
ALA 2890.0075
PRO 2900.0028
PHE 2910.0034
GLN 2920.0047
ASP 2930.0049
ASN 2940.0088
PRO 2950.0140
VAL 2960.0153
LEU 2970.0113
GLN 2980.0117
GLY 2990.0147
ILE 3000.0129
ALA 3010.0112
ASN 3020.0130
PHE 3030.0133
PHE 3040.0108
ASN 3050.0117
PRO 3060.0115
THR 3070.0124
ARG 3080.0131
PRO 3090.0142
SER 3100.0128
GLY 3110.0106
LEU 3120.0102
PHE 3130.0113
ILE 3140.0101
GLU 3150.0089
VAL 3160.0082
LEU 3170.0084
LEU 3180.0075
VAL 3190.0066
ILE 3200.0061
LEU 3210.0065
PHE 3220.0053
THR 3230.0049
TYR 3240.0038
VAL 3250.0044
TYR 3260.0039
THR 3270.0044
ALA 3280.0055
VAL 3290.0055
GLN 3300.0062
PHE 3310.0078
ASP 3320.0080
PRO 3330.0069
LYS 3340.0107
ARG 3350.0106
ILE 3360.0078
ALA 3370.0075
GLU 3380.0088
SER 3390.0064
LEU 3400.0036
ARG 3410.0063
GLU 3420.0033
TYR 3430.0027
GLY 3440.0073
GLY 3450.0058
PHE 3460.0059
ILE 3470.0065
PRO 3480.0083
GLY 3490.0120
ILE 3500.0114
ARG 3510.0140
PRO 3520.0109
GLY 3530.0121
GLU 3540.0151
PRO 3550.0135
THR 3560.0098
VAL 3570.0111
LYS 3580.0108
PHE 3590.0090
LEU 3600.0083
GLU 3610.0095
HIS 3620.0087
ILE 3630.0077
VAL 3640.0072
SER 3650.0068
ARG 3660.0080
LEU 3670.0066
THR 3680.0052
LEU 3690.0047
TRP 3700.0058
GLY 3710.0060
ALA 3720.0054
LEU 3730.0052
PHE 3740.0057
LEU 3750.0060
GLY 3760.0061
LEU 3770.0061
VAL 3780.0062
THR 3790.0069
LEU 3800.0053
LEU 3810.0061
PRO 3820.0057
GLN 3830.0076
ILE 3840.0104
ILE 3850.0139
GLN 3860.0112
ASN 3870.0184
LEU 3880.0301
THR 3890.0269
GLY 3900.0252
ILE 3910.0114
HIS 3920.0111
SER 3930.0108
ILE 3940.0117
ALA 3950.0117
PHE 3960.0085
SER 3970.0088
GLY 3980.0074
ILE 3990.0078
GLY 4000.0084
LEU 4010.0080
LEU 4020.0079
ILE 4030.0073
VAL 4040.0075
VAL 4050.0071
GLY 4060.0055
VAL 4070.0052
ALA 4080.0052
LEU 4090.0048
ASP 4100.0052
THR 4110.0048
LEU 4120.0051
ARG 4130.0058
GLN 4140.0070
VAL 4150.0054
GLU 4160.0076
SER 4170.0124
GLN 4180.0163
LEU 4190.0137
MET 4200.0244
LEU 4210.0417
ARG 4220.0331
SER 4230.0508
TYR 4240.0838
MET 10.0158
PHE 20.0103
ALA 30.0093
ARG 40.0112
LEU 50.0080
ILE 60.0088
ARG 70.0112
TYR 80.0090
PHE 90.0090
GLN 100.0116
GLU 110.0111
ALA 120.0093
ARG 130.0108
ALA 140.0109
GLU 150.0090
LEU 160.0091
ALA 170.0100
ARG 180.0094
VAL 190.0075
THR 200.0085
TRP 210.0083
PRO 220.0169
THR 230.0412
ARG 240.0471
GLU 250.0276
GLN 260.0163
VAL 270.0142
VAL 280.0157
GLU 290.0076
GLY 300.0046
THR 310.0082
GLN 320.0090
ALA 330.0067
ILE 340.0071
LEU 350.0073
LEU 360.0072
PHE 370.0066
THR 380.0069
LEU 390.0081
ALA 400.0094
PHE 410.0084
MET 420.0097
VAL 430.0122
ILE 440.0113
LEU 450.0100
GLY 460.0126
LEU 470.0136
TYR 480.0109
ASP 490.0111
THR 500.0137
VAL 510.0140
PHE 520.0119
ARG 530.0126
PHE 540.0149
LEU 550.0147
ILE 560.0159
GLY 570.0135
LEU 580.0186
LEU 590.0181
ARG 600.0192
MET 10.0437
ASP 20.0471
LEU 30.0486
LEU 40.0347
TYR 50.0239
THR 60.0318
LEU 70.0261
VAL 80.0192
ILE 90.0196
LEU 100.0237
PHE 110.0195
TYR 120.0157
LEU 130.0173
GLY 140.0168
VAL 150.0149
ALA 160.0138
GLY 170.0136
LEU 180.0137
LEU 190.0117
VAL 200.0104
TYR 210.0115
LEU 220.0111
VAL 230.0086
LEU 240.0077
VAL 250.0092
GLN 260.0085
GLU 270.0065
PRO 280.0057
LYS 290.0050
GLN 300.0045
GLY 310.0106
ALA 320.0102
GLY 330.0074
ASP 340.0056
LEU 350.0055
MET 360.0060
GLY 370.0041
GLY 380.0106
SER 390.0134
ALA 400.0128
ASP 410.0117
LEU 420.0173
PHE 430.0211
SER 440.0250
ALA 450.0274
ARG 460.0289
GLY 470.0206
VAL 480.0199
THR 490.0132
GLY 500.0131
GLY 510.0131
LEU 520.0126
TYR 530.0114
ARG 540.0120
LEU 550.0129
THR 560.0114
VAL 570.0118
ILE 580.0139
LEU 590.0133
GLY 600.0125
VAL 610.0135
VAL 620.0137
PHE 630.0122
ALA 640.0105
ALA 650.0106
LEU 660.0116
ALA 670.0091
LEU 680.0090
VAL 690.0144
ILE 700.0133
GLY 710.0154
LEU 720.0200
TRP 730.0284
PRO 740.0284
ARG 750.0235

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.