CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN TRANSPORT/IMMUNE SYSTEM 10-JUL-15 5AWW  ***

<R2> analysis for 2602160914402522044

---  normal mode 31  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0598
MET 10.0096
VAL 20.0112
LYS 30.0139
ALA 40.0141
PHE 50.0136
TRP 60.0201
SER 70.0218
ALA 80.0180
LEU 90.0231
GLN 100.0303
ILE 110.0277
PRO 120.0294
GLU 130.0262
LEU 140.0204
ARG 150.0236
GLN 160.0257
ARG 170.0177
VAL 180.0174
LEU 190.0176
PHE 200.0154
THR 210.0100
LEU 220.0083
LEU 230.0094
VAL 240.0074
LEU 250.0039
ALA 260.0036
ALA 270.0053
TYR 280.0065
ARG 290.0066
LEU 300.0066
GLY 310.0096
ALA 320.0096
PHE 330.0104
ILE 340.0121
PRO 350.0120
THR 360.0120
PRO 370.0144
GLY 380.0137
VAL 390.0108
ASP 400.0100
LEU 410.0107
ASP 420.0127
LYS 430.0087
ILE 440.0070
GLN 450.0124
GLU 460.0154
PHE 470.0118
LEU 480.0117
ARG 490.0203
THR 500.0211
ALA 510.0238
GLN 520.0184
GLY 530.0132
GLY 540.0132
VAL 550.0068
PHE 560.0031
GLY 570.0057
ILE 580.0041
ILE 590.0044
ASN 600.0060
LEU 610.0063
PHE 620.0062
SER 630.0069
GLY 640.0077
GLY 650.0081
ASN 660.0088
PHE 670.0079
GLU 680.0083
ARG 690.0101
PHE 700.0099
SER 710.0106
ILE 720.0111
PHE 730.0088
ALA 740.0089
LEU 750.0079
GLY 760.0070
ILE 770.0063
MET 780.0067
PRO 790.0075
TYR 800.0066
ILE 810.0063
THR 820.0056
ALA 830.0055
ALA 840.0052
ILE 850.0044
ILE 860.0043
MET 870.0031
GLN 880.0019
ILE 890.0060
LEU 900.0079
VAL 910.0078
THR 920.0132
VAL 930.0189
VAL 940.0211
PRO 950.0223
ALA 960.0232
LEU 970.0140
GLU 980.0112
LYS 990.0162
LEU 1000.0146
SER 1010.0073
LYS 1020.0100
GLU 1030.0202
GLY 1040.0219
GLU 1050.0268
GLU 1060.0221
GLY 1070.0142
ARG 1080.0103
ARG 1090.0099
ILE 1100.0063
ILE 1110.0049
ASN 1120.0074
GLN 1130.0078
TYR 1140.0065
THR 1150.0070
ARG 1160.0072
ILE 1170.0085
GLY 1180.0085
GLY 1190.0072
ILE 1200.0078
ALA 1210.0078
LEU 1220.0079
GLY 1230.0080
ALA 1240.0108
PHE 1250.0099
GLN 1260.0079
GLY 1270.0111
PHE 1280.0115
PHE 1290.0089
LEU 1300.0075
ALA 1310.0095
THR 1320.0096
ALA 1330.0087
PHE 1340.0042
LEU 1350.0050
GLY 1360.0090
ALA 1370.0078
GLU 1380.0068
GLY 1390.0071
GLY 1400.0065
ARG 1410.0018
PHE 1420.0047
LEU 1430.0086
LEU 1440.0118
PRO 1450.0168
GLY 1460.0167
TRP 1470.0159
SER 1480.0156
PRO 1490.0143
GLY 1500.0160
PRO 1510.0137
PHE 1520.0139
PHE 1530.0130
TRP 1540.0127
PHE 1550.0129
VAL 1560.0129
VAL 1570.0126
VAL 1580.0125
VAL 1590.0132
THR 1600.0122
GLN 1610.0113
VAL 1620.0109
ALA 1630.0103
GLY 1640.0097
ILE 1650.0087
ALA 1660.0075
LEU 1670.0058
LEU 1680.0062
LEU 1690.0061
TRP 1700.0052
MET 1710.0031
ALA 1720.0050
GLU 1730.0078
ARG 1740.0073
ILE 1750.0068
THR 1760.0083
GLU 1770.0124
TYR 1780.0149
GLY 1790.0110
ILE 1800.0074
GLY 1810.0021
ASN 1820.0039
GLY 1830.0040
THR 1840.0052
SER 1850.0049
LEU 1860.0032
ILE 1870.0041
ILE 1880.0051
PHE 1890.0045
ALA 1900.0045
GLY 1910.0056
ILE 1920.0059
VAL 1930.0060
VAL 1940.0063
GLU 1950.0074
TRP 1960.0076
LEU 1970.0081
PRO 1980.0097
GLN 1990.0087
ILE 2000.0082
LEU 2010.0091
ARG 2020.0082
THR 2030.0060
ILE 2040.0080
GLY 2050.0079
LEU 2060.0040
ILE 2070.0073
ARG 2080.0116
THR 2090.0087
GLY 2100.0097
GLU 2110.0055
VAL 2120.0042
ASN 2130.0078
LEU 2140.0090
VAL 2150.0079
ALA 2160.0042
PHE 2170.0053
LEU 2180.0070
PHE 2190.0043
PHE 2200.0041
LEU 2210.0062
ALA 2220.0052
PHE 2230.0051
ILE 2240.0056
VAL 2250.0057
LEU 2260.0053
ALA 2270.0055
PHE 2280.0047
ALA 2290.0047
GLY 2300.0041
MET 2310.0014
ALA 2320.0020
ALA 2330.0031
VAL 2340.0029
GLN 2350.0051
GLN 2360.0079
ALA 2370.0070
GLU 2380.0123
ARG 2390.0104
ARG 2400.0093
ILE 2410.0085
PRO 2420.0072
VAL 2430.0049
GLN 2440.0071
TYR 2450.0070
ALA 2460.0092
ARG 2470.0082
LYS 2480.0056
VAL 2490.0029
VAL 2500.0087
GLY 2510.0142
GLY 2520.0121
ARG 2530.0070
VAL 2540.0035
TYR 2550.0051
GLY 2560.0093
GLY 2570.0124
GLN 2580.0146
ALA 2590.0103
THR 2600.0038
TYR 2610.0056
ILE 2620.0065
PRO 2630.0095
ILE 2640.0102
LYS 2650.0100
LEU 2660.0102
ASN 2670.0100
ALA 2680.0091
ALA 2690.0106
GLY 2700.0107
VAL 2710.0070
ILE 2720.0079
PRO 2730.0090
ILE 2740.0066
ILE 2750.0065
PHE 2760.0066
ALA 2770.0072
ALA 2780.0070
ALA 2790.0073
ILE 2800.0069
LEU 2810.0052
GLN 2820.0052
ILE 2830.0084
PRO 2840.0081
ILE 2850.0058
PHE 2860.0073
LEU 2870.0122
ALA 2880.0124
ALA 2890.0097
PRO 2900.0080
PHE 2910.0149
GLN 2920.0180
ASP 2930.0264
ASN 2940.0301
PRO 2950.0352
VAL 2960.0348
LEU 2970.0253
GLN 2980.0198
GLY 2990.0218
ILE 3000.0180
ALA 3010.0104
ASN 3020.0098
PHE 3030.0092
PHE 3040.0056
ASN 3050.0033
PRO 3060.0007
THR 3070.0012
ARG 3080.0023
PRO 3090.0013
SER 3100.0028
GLY 3110.0032
LEU 3120.0023
PHE 3130.0041
ILE 3140.0056
GLU 3150.0058
VAL 3160.0064
LEU 3170.0067
LEU 3180.0072
VAL 3190.0080
ILE 3200.0077
LEU 3210.0075
PHE 3220.0075
THR 3230.0088
TYR 3240.0073
VAL 3250.0067
TYR 3260.0080
THR 3270.0083
ALA 3280.0071
VAL 3290.0068
GLN 3300.0087
PHE 3310.0093
ASP 3320.0082
PRO 3330.0077
LYS 3340.0093
ARG 3350.0085
ILE 3360.0072
ALA 3370.0070
GLU 3380.0068
SER 3390.0062
LEU 3400.0046
ARG 3410.0046
GLU 3420.0051
TYR 3430.0056
GLY 3440.0053
GLY 3450.0052
PHE 3460.0053
ILE 3470.0074
PRO 3480.0102
GLY 3490.0138
ILE 3500.0128
ARG 3510.0135
PRO 3520.0095
GLY 3530.0104
GLU 3540.0131
PRO 3550.0132
THR 3560.0105
VAL 3570.0114
LYS 3580.0119
PHE 3590.0114
LEU 3600.0104
GLU 3610.0106
HIS 3620.0117
ILE 3630.0115
VAL 3640.0105
SER 3650.0086
ARG 3660.0133
LEU 3670.0116
THR 3680.0102
LEU 3690.0103
TRP 3700.0141
GLY 3710.0145
ALA 3720.0112
LEU 3730.0093
PHE 3740.0081
LEU 3750.0080
GLY 3760.0072
LEU 3770.0065
VAL 3780.0048
THR 3790.0051
LEU 3800.0048
LEU 3810.0048
PRO 3820.0034
GLN 3830.0025
ILE 3840.0028
ILE 3850.0030
GLN 3860.0026
ASN 3870.0019
LEU 3880.0023
THR 3890.0028
GLY 3900.0022
ILE 3910.0027
HIS 3920.0031
SER 3930.0046
ILE 3940.0050
ALA 3950.0048
PHE 3960.0052
SER 3970.0046
GLY 3980.0051
ILE 3990.0048
GLY 4000.0038
LEU 4010.0045
LEU 4020.0050
ILE 4030.0043
VAL 4040.0041
VAL 4050.0047
GLY 4060.0047
VAL 4070.0029
ALA 4080.0040
LEU 4090.0048
ASP 4100.0036
THR 4110.0023
LEU 4120.0056
ARG 4130.0066
GLN 4140.0050
VAL 4150.0072
GLU 4160.0116
SER 4170.0145
GLN 4180.0119
LEU 4190.0203
MET 4200.0277
LEU 4210.0292
ARG 4220.0275
SER 4230.0442
TYR 4240.0574
MET 10.0415
PHE 20.0254
ALA 30.0230
ARG 40.0258
LEU 50.0185
ILE 60.0242
ARG 70.0264
TYR 80.0188
PHE 90.0209
GLN 100.0280
GLU 110.0244
ALA 120.0195
ARG 130.0248
ALA 140.0232
GLU 150.0172
LEU 160.0191
ALA 170.0201
ARG 180.0153
VAL 190.0120
THR 200.0126
TRP 210.0149
PRO 220.0268
THR 230.0543
ARG 240.0572
GLU 250.0289
GLN 260.0182
VAL 270.0131
VAL 280.0117
GLU 290.0059
GLY 300.0056
THR 310.0086
GLN 320.0079
ALA 330.0077
ILE 340.0064
LEU 350.0080
LEU 360.0081
PHE 370.0068
THR 380.0066
LEU 390.0081
ALA 400.0079
PHE 410.0065
MET 420.0068
VAL 430.0090
ILE 440.0071
LEU 450.0060
GLY 460.0092
LEU 470.0088
TYR 480.0066
ASP 490.0085
THR 500.0106
VAL 510.0084
PHE 520.0062
ARG 530.0079
PHE 540.0094
LEU 550.0074
ILE 560.0030
GLY 570.0059
LEU 580.0125
LEU 590.0121
ARG 600.0103
MET 10.0444
ASP 20.0449
LEU 30.0429
LEU 40.0290
TYR 50.0172
THR 60.0232
LEU 70.0157
VAL 80.0109
ILE 90.0131
LEU 100.0163
PHE 110.0137
TYR 120.0127
LEU 130.0112
GLY 140.0116
VAL 150.0117
ALA 160.0113
GLY 170.0101
LEU 180.0059
LEU 190.0057
VAL 200.0084
TYR 210.0096
LEU 220.0073
VAL 230.0069
LEU 240.0095
VAL 250.0113
GLN 260.0102
GLU 270.0102
PRO 280.0097
LYS 290.0107
GLN 300.0123
GLY 310.0179
ALA 320.0141
GLY 330.0131
ASP 340.0106
LEU 350.0101
MET 360.0094
GLY 370.0043
GLY 380.0082
SER 390.0084
ALA 400.0111
ASP 410.0150
LEU 420.0229
PHE 430.0314
SER 440.0356
ALA 450.0456
ARG 460.0598
GLY 470.0528
VAL 480.0473
THR 490.0234
GLY 500.0215
GLY 510.0155
LEU 520.0106
TYR 530.0099
ARG 540.0099
LEU 550.0030
THR 560.0012
VAL 570.0063
ILE 580.0080
LEU 590.0077
GLY 600.0091
VAL 610.0115
VAL 620.0122
PHE 630.0122
ALA 640.0116
ALA 650.0112
LEU 660.0112
ALA 670.0104
LEU 680.0111
VAL 690.0105
ILE 700.0111
GLY 710.0166
LEU 720.0196
TRP 730.0230
PRO 740.0225
ARG 750.0145

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.