CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN TRANSPORT/IMMUNE SYSTEM 10-JUL-15 5AWW  ***

<R2> analysis for 2602160914402522044

---  normal mode 37  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0489
MET 10.0085
VAL 20.0084
LYS 30.0050
ALA 40.0047
PHE 50.0074
TRP 60.0039
SER 70.0048
ALA 80.0079
LEU 90.0110
GLN 100.0112
ILE 110.0117
PRO 120.0157
GLU 130.0143
LEU 140.0106
ARG 150.0133
GLN 160.0133
ARG 170.0121
VAL 180.0118
LEU 190.0119
PHE 200.0114
THR 210.0112
LEU 220.0114
LEU 230.0112
VAL 240.0093
LEU 250.0097
ALA 260.0124
ALA 270.0098
TYR 280.0075
ARG 290.0118
LEU 300.0123
GLY 310.0065
ALA 320.0109
PHE 330.0101
ILE 340.0085
PRO 350.0092
THR 360.0102
PRO 370.0111
GLY 380.0106
VAL 390.0119
ASP 400.0131
LEU 410.0134
ASP 420.0145
LYS 430.0134
ILE 440.0120
GLN 450.0129
GLU 460.0149
PHE 470.0129
LEU 480.0121
ARG 490.0150
THR 500.0143
ALA 510.0134
GLN 520.0112
GLY 530.0121
GLY 540.0102
VAL 550.0079
PHE 560.0094
GLY 570.0089
ILE 580.0073
ILE 590.0087
ASN 600.0083
LEU 610.0077
PHE 620.0088
SER 630.0092
GLY 640.0086
GLY 650.0083
ASN 660.0092
PHE 670.0106
GLU 680.0105
ARG 690.0098
PHE 700.0092
SER 710.0082
ILE 720.0079
PHE 730.0061
ALA 740.0064
LEU 750.0062
GLY 760.0037
ILE 770.0041
MET 780.0035
PRO 790.0041
TYR 800.0050
ILE 810.0051
THR 820.0042
ALA 830.0066
ALA 840.0071
ILE 850.0079
ILE 860.0115
MET 870.0130
GLN 880.0152
ILE 890.0217
LEU 900.0186
VAL 910.0142
THR 920.0229
VAL 930.0234
VAL 940.0116
PRO 950.0088
ALA 960.0146
LEU 970.0063
GLU 980.0175
LYS 990.0234
LEU 1000.0130
SER 1010.0202
LYS 1020.0294
GLU 1030.0215
GLY 1040.0234
GLU 1050.0180
GLU 1060.0095
GLY 1070.0079
ARG 1080.0145
ARG 1090.0151
ILE 1100.0114
ILE 1110.0119
ASN 1120.0135
GLN 1130.0138
TYR 1140.0126
THR 1150.0119
ARG 1160.0123
ILE 1170.0122
GLY 1180.0084
GLY 1190.0081
ILE 1200.0080
ALA 1210.0076
LEU 1220.0071
GLY 1230.0077
ALA 1240.0074
PHE 1250.0073
GLN 1260.0073
GLY 1270.0091
PHE 1280.0078
PHE 1290.0083
LEU 1300.0094
ALA 1310.0097
THR 1320.0091
ALA 1330.0094
PHE 1340.0107
LEU 1350.0110
GLY 1360.0114
ALA 1370.0114
GLU 1380.0117
GLY 1390.0118
GLY 1400.0122
ARG 1410.0129
PHE 1420.0129
LEU 1430.0123
LEU 1440.0126
PRO 1450.0113
GLY 1460.0097
TRP 1470.0097
SER 1480.0101
PRO 1490.0101
GLY 1500.0090
PRO 1510.0095
PHE 1520.0091
PHE 1530.0100
TRP 1540.0107
PHE 1550.0109
VAL 1560.0109
VAL 1570.0102
VAL 1580.0113
VAL 1590.0114
THR 1600.0090
GLN 1610.0094
VAL 1620.0099
ALA 1630.0077
GLY 1640.0077
ILE 1650.0074
ALA 1660.0076
LEU 1670.0057
LEU 1680.0062
LEU 1690.0066
TRP 1700.0064
MET 1710.0052
ALA 1720.0078
GLU 1730.0089
ARG 1740.0073
ILE 1750.0090
THR 1760.0096
GLU 1770.0101
TYR 1780.0105
GLY 1790.0100
ILE 1800.0092
GLY 1810.0077
ASN 1820.0066
GLY 1830.0051
THR 1840.0044
SER 1850.0068
LEU 1860.0080
ILE 1870.0078
ILE 1880.0089
PHE 1890.0100
ALA 1900.0114
GLY 1910.0127
ILE 1920.0132
VAL 1930.0162
VAL 1940.0163
GLU 1950.0169
TRP 1960.0175
LEU 1970.0170
PRO 1980.0163
GLN 1990.0159
ILE 2000.0147
LEU 2010.0147
ARG 2020.0126
THR 2030.0078
ILE 2040.0085
GLY 2050.0181
LEU 2060.0170
ILE 2070.0142
ARG 2080.0246
THR 2090.0350
GLY 2100.0343
GLU 2110.0261
VAL 2120.0168
ASN 2130.0220
LEU 2140.0179
VAL 2150.0251
ALA 2160.0171
PHE 2170.0119
LEU 2180.0207
PHE 2190.0237
PHE 2200.0189
LEU 2210.0216
ALA 2220.0248
PHE 2230.0203
ILE 2240.0200
VAL 2250.0201
LEU 2260.0184
ALA 2270.0193
PHE 2280.0180
ALA 2290.0164
GLY 2300.0156
MET 2310.0154
ALA 2320.0147
ALA 2330.0126
VAL 2340.0100
GLN 2350.0113
GLN 2360.0109
ALA 2370.0085
GLU 2380.0072
ARG 2390.0069
ARG 2400.0075
ILE 2410.0150
PRO 2420.0140
VAL 2430.0115
GLN 2440.0120
TYR 2450.0094
ALA 2460.0138
ARG 2470.0157
LYS 2480.0166
VAL 2490.0146
VAL 2500.0180
GLY 2510.0185
GLY 2520.0293
ARG 2530.0180
VAL 2540.0103
TYR 2550.0149
GLY 2560.0162
GLY 2570.0158
GLN 2580.0159
ALA 2590.0127
THR 2600.0109
TYR 2610.0133
ILE 2620.0128
PRO 2630.0104
ILE 2640.0103
LYS 2650.0074
LEU 2660.0061
ASN 2670.0079
ALA 2680.0035
ALA 2690.0036
GLY 2700.0025
VAL 2710.0027
ILE 2720.0016
PRO 2730.0005
ILE 2740.0028
ILE 2750.0020
PHE 2760.0007
ALA 2770.0043
ALA 2780.0041
ALA 2790.0044
ILE 2800.0057
LEU 2810.0066
GLN 2820.0065
ILE 2830.0073
PRO 2840.0065
ILE 2850.0075
PHE 2860.0097
LEU 2870.0086
ALA 2880.0095
ALA 2890.0113
PRO 2900.0118
PHE 2910.0115
GLN 2920.0129
ASP 2930.0128
ASN 2940.0120
PRO 2950.0126
VAL 2960.0116
LEU 2970.0113
GLN 2980.0114
GLY 2990.0110
ILE 3000.0104
ALA 3010.0106
ASN 3020.0103
PHE 3030.0095
PHE 3040.0098
ASN 3050.0104
PRO 3060.0108
THR 3070.0120
ARG 3080.0100
PRO 3090.0091
SER 3100.0087
GLY 3110.0108
LEU 3120.0114
PHE 3130.0103
ILE 3140.0098
GLU 3150.0095
VAL 3160.0087
LEU 3170.0080
LEU 3180.0072
VAL 3190.0058
ILE 3200.0050
LEU 3210.0043
PHE 3220.0030
THR 3230.0034
TYR 3240.0041
VAL 3250.0048
TYR 3260.0050
THR 3270.0059
ALA 3280.0085
VAL 3290.0094
GLN 3300.0097
PHE 3310.0123
ASP 3320.0150
PRO 3330.0129
LYS 3340.0092
ARG 3350.0137
ILE 3360.0140
ALA 3370.0059
GLU 3380.0114
SER 3390.0165
LEU 3400.0072
ARG 3410.0103
GLU 3420.0191
TYR 3430.0112
GLY 3440.0087
GLY 3450.0053
PHE 3460.0074
ILE 3470.0127
PRO 3480.0174
GLY 3490.0329
ILE 3500.0256
ARG 3510.0286
PRO 3520.0166
GLY 3530.0091
GLU 3540.0056
PRO 3550.0147
THR 3560.0107
VAL 3570.0111
LYS 3580.0166
PHE 3590.0172
LEU 3600.0163
GLU 3610.0165
HIS 3620.0156
ILE 3630.0128
VAL 3640.0100
SER 3650.0107
ARG 3660.0089
LEU 3670.0067
THR 3680.0071
LEU 3690.0059
TRP 3700.0049
GLY 3710.0050
ALA 3720.0054
LEU 3730.0045
PHE 3740.0067
LEU 3750.0081
GLY 3760.0094
LEU 3770.0119
VAL 3780.0141
THR 3790.0138
LEU 3800.0149
LEU 3810.0162
PRO 3820.0181
GLN 3830.0184
ILE 3840.0184
ILE 3850.0188
GLN 3860.0175
ASN 3870.0170
LEU 3880.0157
THR 3890.0142
GLY 3900.0127
ILE 3910.0125
HIS 3920.0160
SER 3930.0178
ILE 3940.0138
ALA 3950.0164
PHE 3960.0165
SER 3970.0156
GLY 3980.0141
ILE 3990.0127
GLY 4000.0147
LEU 4010.0149
LEU 4020.0129
ILE 4030.0127
VAL 4040.0128
VAL 4050.0130
GLY 4060.0105
VAL 4070.0103
ALA 4080.0097
LEU 4090.0089
ASP 4100.0091
THR 4110.0077
LEU 4120.0080
ARG 4130.0080
GLN 4140.0065
VAL 4150.0045
GLU 4160.0038
SER 4170.0060
GLN 4180.0023
LEU 4190.0068
MET 4200.0119
LEU 4210.0132
ARG 4220.0153
SER 4230.0218
TYR 4240.0330
MET 10.0381
PHE 20.0042
ALA 30.0264
ARG 40.0174
LEU 50.0161
ILE 60.0218
ARG 70.0087
TYR 80.0073
PHE 90.0119
GLN 100.0115
GLU 110.0087
ALA 120.0089
ARG 130.0071
ALA 140.0070
GLU 150.0059
LEU 160.0036
ALA 170.0039
ARG 180.0041
VAL 190.0018
THR 200.0035
TRP 210.0085
PRO 220.0135
THR 230.0175
ARG 240.0169
GLU 250.0182
GLN 260.0171
VAL 270.0149
VAL 280.0141
GLU 290.0140
GLY 300.0148
THR 310.0143
GLN 320.0121
ALA 330.0130
ILE 340.0137
LEU 350.0131
LEU 360.0119
PHE 370.0118
THR 380.0137
LEU 390.0141
ALA 400.0124
PHE 410.0134
MET 420.0160
VAL 430.0160
ILE 440.0140
LEU 450.0163
GLY 460.0224
LEU 470.0229
TYR 480.0219
ASP 490.0266
THR 500.0347
VAL 510.0354
PHE 520.0302
ARG 530.0356
PHE 540.0409
LEU 550.0369
ILE 560.0390
GLY 570.0257
LEU 580.0285
LEU 590.0489
ARG 600.0196
MET 10.0139
ASP 20.0129
LEU 30.0178
LEU 40.0181
TYR 50.0126
THR 60.0121
LEU 70.0163
VAL 80.0154
ILE 90.0135
LEU 100.0146
PHE 110.0159
TYR 120.0143
LEU 130.0155
GLY 140.0159
VAL 150.0146
ALA 160.0132
GLY 170.0148
LEU 180.0136
LEU 190.0113
VAL 200.0132
TYR 210.0143
LEU 220.0113
VAL 230.0116
LEU 240.0139
VAL 250.0152
GLN 260.0137
GLU 270.0163
PRO 280.0191
LYS 290.0197
GLN 300.0144
GLY 310.0209
ALA 320.0184
GLY 330.0108
ASP 340.0055
LEU 350.0051
MET 360.0061
GLY 370.0083
GLY 380.0095
SER 390.0083
ALA 400.0101
ASP 410.0103
LEU 420.0148
PHE 430.0174
SER 440.0165
ALA 450.0213
ARG 460.0265
GLY 470.0204
VAL 480.0207
THR 490.0107
GLY 500.0073
GLY 510.0045
LEU 520.0067
TYR 530.0062
ARG 540.0037
LEU 550.0061
THR 560.0076
VAL 570.0062
ILE 580.0074
LEU 590.0094
GLY 600.0092
VAL 610.0095
VAL 620.0096
PHE 630.0097
ALA 640.0098
ALA 650.0084
LEU 660.0099
ALA 670.0095
LEU 680.0083
VAL 690.0082
ILE 700.0106
GLY 710.0105
LEU 720.0096
TRP 730.0096
PRO 740.0065
ARG 750.0050

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.