CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN TRANSPORT/IMMUNE SYSTEM 10-JUL-15 5AWW  ***

<R2> analysis for 2602160914402522044

---  normal mode 52  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0731
MET 10.0063
VAL 20.0106
LYS 30.0133
ALA 40.0078
PHE 50.0099
TRP 60.0151
SER 70.0138
ALA 80.0112
LEU 90.0166
GLN 100.0197
ILE 110.0136
PRO 120.0130
GLU 130.0080
LEU 140.0087
ARG 150.0128
GLN 160.0104
ARG 170.0093
VAL 180.0104
LEU 190.0086
PHE 200.0079
THR 210.0082
LEU 220.0055
LEU 230.0046
VAL 240.0051
LEU 250.0040
ALA 260.0015
ALA 270.0050
TYR 280.0058
ARG 290.0045
LEU 300.0065
GLY 310.0097
ALA 320.0072
PHE 330.0094
ILE 340.0114
PRO 350.0114
THR 360.0107
PRO 370.0094
GLY 380.0069
VAL 390.0073
ASP 400.0085
LEU 410.0108
ASP 420.0132
LYS 430.0095
ILE 440.0077
GLN 450.0110
GLU 460.0116
PHE 470.0060
LEU 480.0084
ARG 490.0132
THR 500.0060
ALA 510.0054
GLN 520.0064
GLY 530.0052
GLY 540.0097
VAL 550.0075
PHE 560.0053
GLY 570.0072
ILE 580.0044
ILE 590.0034
ASN 600.0032
LEU 610.0034
PHE 620.0048
SER 630.0040
GLY 640.0046
GLY 650.0035
ASN 660.0068
PHE 670.0083
GLU 680.0081
ARG 690.0088
PHE 700.0101
SER 710.0103
ILE 720.0101
PHE 730.0080
ALA 740.0076
LEU 750.0074
GLY 760.0024
ILE 770.0023
MET 780.0027
PRO 790.0060
TYR 800.0060
ILE 810.0051
THR 820.0062
ALA 830.0063
ALA 840.0066
ILE 850.0062
ILE 860.0038
MET 870.0053
GLN 880.0073
ILE 890.0051
LEU 900.0022
VAL 910.0032
THR 920.0076
VAL 930.0083
VAL 940.0050
PRO 950.0033
ALA 960.0062
LEU 970.0052
GLU 980.0041
LYS 990.0051
LEU 1000.0050
SER 1010.0056
LYS 1020.0039
GLU 1030.0052
GLY 1040.0100
GLU 1050.0101
GLU 1060.0051
GLY 1070.0031
ARG 1080.0061
ARG 1090.0051
ILE 1100.0081
ILE 1110.0104
ASN 1120.0087
GLN 1130.0089
TYR 1140.0106
THR 1150.0087
ARG 1160.0079
ILE 1170.0084
GLY 1180.0086
GLY 1190.0086
ILE 1200.0085
ALA 1210.0098
LEU 1220.0092
GLY 1230.0100
ALA 1240.0113
PHE 1250.0104
GLN 1260.0097
GLY 1270.0108
PHE 1280.0098
PHE 1290.0099
LEU 1300.0079
ALA 1310.0065
THR 1320.0067
ALA 1330.0081
PHE 1340.0048
LEU 1350.0029
GLY 1360.0041
ALA 1370.0081
GLU 1380.0128
GLY 1390.0137
GLY 1400.0084
ARG 1410.0080
PHE 1420.0057
LEU 1430.0066
LEU 1440.0101
PRO 1450.0115
GLY 1460.0086
TRP 1470.0061
SER 1480.0040
PRO 1490.0030
GLY 1500.0055
PRO 1510.0067
PHE 1520.0039
PHE 1530.0038
TRP 1540.0068
PHE 1550.0070
VAL 1560.0065
VAL 1570.0083
VAL 1580.0094
VAL 1590.0087
THR 1600.0085
GLN 1610.0096
VAL 1620.0092
ALA 1630.0075
GLY 1640.0079
ILE 1650.0080
ALA 1660.0057
LEU 1670.0054
LEU 1680.0054
LEU 1690.0028
TRP 1700.0022
MET 1710.0022
ALA 1720.0020
GLU 1730.0025
ARG 1740.0029
ILE 1750.0062
THR 1760.0064
GLU 1770.0056
TYR 1780.0061
GLY 1790.0074
ILE 1800.0077
GLY 1810.0087
ASN 1820.0087
GLY 1830.0088
THR 1840.0073
SER 1850.0068
LEU 1860.0069
ILE 1870.0050
ILE 1880.0057
PHE 1890.0063
ALA 1900.0075
GLY 1910.0072
ILE 1920.0076
VAL 1930.0085
VAL 1940.0083
GLU 1950.0085
TRP 1960.0105
LEU 1970.0094
PRO 1980.0111
GLN 1990.0145
ILE 2000.0142
LEU 2010.0134
ARG 2020.0123
THR 2030.0141
ILE 2040.0143
GLY 2050.0087
LEU 2060.0104
ILE 2070.0191
ARG 2080.0284
THR 2090.0255
GLY 2100.0260
GLU 2110.0126
VAL 2120.0146
ASN 2130.0228
LEU 2140.0209
VAL 2150.0276
ALA 2160.0246
PHE 2170.0192
LEU 2180.0227
PHE 2190.0260
PHE 2200.0207
LEU 2210.0214
ALA 2220.0211
PHE 2230.0138
ILE 2240.0146
VAL 2250.0131
LEU 2260.0076
ALA 2270.0077
PHE 2280.0074
ALA 2290.0027
GLY 2300.0017
MET 2310.0037
ALA 2320.0039
ALA 2330.0064
VAL 2340.0095
GLN 2350.0077
GLN 2360.0075
ALA 2370.0097
GLU 2380.0088
ARG 2390.0075
ARG 2400.0075
ILE 2410.0146
PRO 2420.0144
VAL 2430.0133
GLN 2440.0076
TYR 2450.0141
ALA 2460.0263
ARG 2470.0133
LYS 2480.0093
VAL 2490.0149
VAL 2500.0452
GLY 2510.0640
GLY 2520.0731
ARG 2530.0283
VAL 2540.0309
TYR 2550.0367
GLY 2560.0167
GLY 2570.0273
GLN 2580.0362
ALA 2590.0217
THR 2600.0138
TYR 2610.0132
ILE 2620.0112
PRO 2630.0072
ILE 2640.0082
LYS 2650.0086
LEU 2660.0094
ASN 2670.0091
ALA 2680.0115
ALA 2690.0109
GLY 2700.0112
VAL 2710.0096
ILE 2720.0122
PRO 2730.0109
ILE 2740.0080
ILE 2750.0084
PHE 2760.0087
ALA 2770.0079
ALA 2780.0075
ALA 2790.0077
ILE 2800.0086
LEU 2810.0084
GLN 2820.0076
ILE 2830.0088
PRO 2840.0095
ILE 2850.0090
PHE 2860.0098
LEU 2870.0104
ALA 2880.0116
ALA 2890.0104
PRO 2900.0085
PHE 2910.0112
GLN 2920.0108
ASP 2930.0162
ASN 2940.0196
PRO 2950.0200
VAL 2960.0222
LEU 2970.0181
GLN 2980.0140
GLY 2990.0162
ILE 3000.0167
ALA 3010.0124
ASN 3020.0110
PHE 3030.0124
PHE 3040.0092
ASN 3050.0073
PRO 3060.0080
THR 3070.0081
ARG 3080.0085
PRO 3090.0144
SER 3100.0131
GLY 3110.0078
LEU 3120.0079
PHE 3130.0142
ILE 3140.0134
GLU 3150.0085
VAL 3160.0098
LEU 3170.0129
LEU 3180.0118
VAL 3190.0091
ILE 3200.0120
LEU 3210.0153
PHE 3220.0120
THR 3230.0107
TYR 3240.0136
VAL 3250.0181
TYR 3260.0159
THR 3270.0138
ALA 3280.0162
VAL 3290.0164
GLN 3300.0117
PHE 3310.0098
ASP 3320.0190
PRO 3330.0198
LYS 3340.0227
ARG 3350.0462
ILE 3360.0419
ALA 3370.0297
GLU 3380.0511
SER 3390.0548
LEU 3400.0321
ARG 3410.0446
GLU 3420.0508
TYR 3430.0319
GLY 3440.0311
GLY 3450.0166
PHE 3460.0116
ILE 3470.0133
PRO 3480.0136
GLY 3490.0222
ILE 3500.0218
ARG 3510.0285
PRO 3520.0168
GLY 3530.0176
GLU 3540.0197
PRO 3550.0185
THR 3560.0155
VAL 3570.0150
LYS 3580.0193
PHE 3590.0167
LEU 3600.0132
GLU 3610.0094
HIS 3620.0101
ILE 3630.0061
VAL 3640.0081
SER 3650.0116
ARG 3660.0107
LEU 3670.0126
THR 3680.0121
LEU 3690.0148
TRP 3700.0139
GLY 3710.0102
ALA 3720.0110
LEU 3730.0135
PHE 3740.0105
LEU 3750.0082
GLY 3760.0100
LEU 3770.0099
VAL 3780.0044
THR 3790.0041
LEU 3800.0047
LEU 3810.0077
PRO 3820.0089
GLN 3830.0123
ILE 3840.0145
ILE 3850.0180
GLN 3860.0203
ASN 3870.0229
LEU 3880.0272
THR 3890.0260
GLY 3900.0295
ILE 3910.0227
HIS 3920.0232
SER 3930.0215
ILE 3940.0117
ALA 3950.0123
PHE 3960.0117
SER 3970.0089
GLY 3980.0053
ILE 3990.0064
GLY 4000.0104
LEU 4010.0079
LEU 4020.0064
ILE 4030.0083
VAL 4040.0085
VAL 4050.0076
GLY 4060.0083
VAL 4070.0087
ALA 4080.0075
LEU 4090.0065
ASP 4100.0083
THR 4110.0081
LEU 4120.0047
ARG 4130.0053
GLN 4140.0073
VAL 4150.0048
GLU 4160.0048
SER 4170.0075
GLN 4180.0060
LEU 4190.0038
MET 4200.0048
LEU 4210.0074
ARG 4220.0075
SER 4230.0097
TYR 4240.0275
MET 10.0276
PHE 20.0290
ALA 30.0035
ARG 40.0193
LEU 50.0292
ILE 60.0320
ARG 70.0299
TYR 80.0260
PHE 90.0265
GLN 100.0269
GLU 110.0243
ALA 120.0179
ARG 130.0160
ALA 140.0156
GLU 150.0128
LEU 160.0120
ALA 170.0088
ARG 180.0075
VAL 190.0090
THR 200.0067
TRP 210.0096
PRO 220.0125
THR 230.0128
ARG 240.0158
GLU 250.0128
GLN 260.0063
VAL 270.0058
VAL 280.0085
GLU 290.0076
GLY 300.0026
THR 310.0034
GLN 320.0081
ALA 330.0063
ILE 340.0057
LEU 350.0090
LEU 360.0096
PHE 370.0083
THR 380.0092
LEU 390.0096
ALA 400.0080
PHE 410.0076
MET 420.0072
VAL 430.0065
ILE 440.0051
LEU 450.0037
GLY 460.0056
LEU 470.0066
TYR 480.0035
ASP 490.0063
THR 500.0123
VAL 510.0150
PHE 520.0125
ARG 530.0142
PHE 540.0174
LEU 550.0160
ILE 560.0184
GLY 570.0136
LEU 580.0096
LEU 590.0288
ARG 600.0162
MET 10.0211
ASP 20.0186
LEU 30.0108
LEU 40.0065
TYR 50.0047
THR 60.0099
LEU 70.0112
VAL 80.0080
ILE 90.0046
LEU 100.0081
PHE 110.0076
TYR 120.0038
LEU 130.0025
GLY 140.0021
VAL 150.0019
ALA 160.0045
GLY 170.0048
LEU 180.0031
LEU 190.0032
VAL 200.0055
TYR 210.0054
LEU 220.0036
VAL 230.0043
LEU 240.0057
VAL 250.0057
GLN 260.0048
GLU 270.0056
PRO 280.0065
LYS 290.0066
GLN 300.0069
GLY 310.0074
ALA 320.0107
GLY 330.0129
ASP 340.0126
LEU 350.0121
MET 360.0108
GLY 370.0090
GLY 380.0095
SER 390.0088
ALA 400.0083
ASP 410.0080
LEU 420.0084
PHE 430.0090
SER 440.0043
ALA 450.0082
ARG 460.0205
GLY 470.0196
VAL 480.0161
THR 490.0065
GLY 500.0035
GLY 510.0036
LEU 520.0046
TYR 530.0033
ARG 540.0039
LEU 550.0040
THR 560.0024
VAL 570.0034
ILE 580.0057
LEU 590.0042
GLY 600.0060
VAL 610.0100
VAL 620.0080
PHE 630.0062
ALA 640.0093
ALA 650.0104
LEU 660.0075
ALA 670.0076
LEU 680.0106
VAL 690.0100
ILE 700.0080
GLY 710.0119
LEU 720.0138
TRP 730.0129
PRO 740.0126
ARG 750.0116

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.