CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN TRANSPORT/IMMUNE SYSTEM 10-JUL-15 5AWW  ***

<R2> analysis for 2602160914402522044

---  normal mode 59  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0636
MET 10.0112
VAL 20.0128
LYS 30.0109
ALA 40.0091
PHE 50.0103
TRP 60.0091
SER 70.0058
ALA 80.0063
LEU 90.0063
GLN 100.0080
ILE 110.0073
PRO 120.0085
GLU 130.0081
LEU 140.0080
ARG 150.0078
GLN 160.0047
ARG 170.0052
VAL 180.0051
LEU 190.0041
PHE 200.0037
THR 210.0048
LEU 220.0036
LEU 230.0031
VAL 240.0040
LEU 250.0022
ALA 260.0019
ALA 270.0025
TYR 280.0019
ARG 290.0025
LEU 300.0033
GLY 310.0053
ALA 320.0062
PHE 330.0069
ILE 340.0075
PRO 350.0093
THR 360.0102
PRO 370.0129
GLY 380.0141
VAL 390.0155
ASP 400.0175
LEU 410.0175
ASP 420.0176
LYS 430.0113
ILE 440.0123
GLN 450.0182
GLU 460.0141
PHE 470.0110
LEU 480.0187
ARG 490.0321
THR 500.0311
ALA 510.0422
GLN 520.0279
GLY 530.0223
GLY 540.0308
VAL 550.0168
PHE 560.0144
GLY 570.0161
ILE 580.0111
ILE 590.0107
ASN 600.0093
LEU 610.0057
PHE 620.0057
SER 630.0049
GLY 640.0059
GLY 650.0068
ASN 660.0055
PHE 670.0100
GLU 680.0104
ARG 690.0122
PHE 700.0104
SER 710.0085
ILE 720.0068
PHE 730.0043
ALA 740.0057
LEU 750.0058
GLY 760.0022
ILE 770.0025
MET 780.0028
PRO 790.0044
TYR 800.0069
ILE 810.0087
THR 820.0067
ALA 830.0081
ALA 840.0117
ILE 850.0094
ILE 860.0088
MET 870.0098
GLN 880.0138
ILE 890.0103
LEU 900.0076
VAL 910.0073
THR 920.0198
VAL 930.0238
VAL 940.0180
PRO 950.0139
ALA 960.0179
LEU 970.0132
GLU 980.0094
LYS 990.0120
LEU 1000.0127
SER 1010.0129
LYS 1020.0087
GLU 1030.0131
GLY 1040.0242
GLU 1050.0261
GLU 1060.0147
GLY 1070.0090
ARG 1080.0131
ARG 1090.0104
ILE 1100.0186
ILE 1110.0235
ASN 1120.0184
GLN 1130.0187
TYR 1140.0222
THR 1150.0173
ARG 1160.0149
ILE 1170.0154
GLY 1180.0116
GLY 1190.0106
ILE 1200.0079
ALA 1210.0053
LEU 1220.0052
GLY 1230.0072
ALA 1240.0102
PHE 1250.0100
GLN 1260.0106
GLY 1270.0138
PHE 1280.0135
PHE 1290.0112
LEU 1300.0122
ALA 1310.0137
THR 1320.0121
ALA 1330.0083
PHE 1340.0062
LEU 1350.0112
GLY 1360.0176
ALA 1370.0132
GLU 1380.0193
GLY 1390.0219
GLY 1400.0179
ARG 1410.0123
PHE 1420.0112
LEU 1430.0158
LEU 1440.0191
PRO 1450.0159
GLY 1460.0156
TRP 1470.0171
SER 1480.0170
PRO 1490.0131
GLY 1500.0156
PRO 1510.0209
PHE 1520.0169
PHE 1530.0150
TRP 1540.0144
PHE 1550.0146
VAL 1560.0123
VAL 1570.0124
VAL 1580.0128
VAL 1590.0094
THR 1600.0082
GLN 1610.0089
VAL 1620.0077
ALA 1630.0067
GLY 1640.0064
ILE 1650.0066
ALA 1660.0090
LEU 1670.0077
LEU 1680.0072
LEU 1690.0094
TRP 1700.0095
MET 1710.0087
ALA 1720.0082
GLU 1730.0087
ARG 1740.0070
ILE 1750.0051
THR 1760.0054
GLU 1770.0040
TYR 1780.0029
GLY 1790.0037
ILE 1800.0049
GLY 1810.0050
ASN 1820.0052
GLY 1830.0053
THR 1840.0047
SER 1850.0042
LEU 1860.0029
ILE 1870.0024
ILE 1880.0018
PHE 1890.0024
ALA 1900.0012
GLY 1910.0011
ILE 1920.0016
VAL 1930.0025
VAL 1940.0028
GLU 1950.0031
TRP 1960.0078
LEU 1970.0103
PRO 1980.0112
GLN 1990.0156
ILE 2000.0173
LEU 2010.0201
ARG 2020.0186
THR 2030.0224
ILE 2040.0148
GLY 2050.0278
LEU 2060.0246
ILE 2070.0148
ARG 2080.0636
THR 2090.0427
GLY 2100.0220
GLU 2110.0301
VAL 2120.0348
ASN 2130.0425
LEU 2140.0312
VAL 2150.0228
ALA 2160.0218
PHE 2170.0161
LEU 2180.0240
PHE 2190.0258
PHE 2200.0188
LEU 2210.0285
ALA 2220.0396
PHE 2230.0258
ILE 2240.0231
VAL 2250.0301
LEU 2260.0276
ALA 2270.0188
PHE 2280.0153
ALA 2290.0107
GLY 2300.0098
MET 2310.0074
ALA 2320.0083
ALA 2330.0047
VAL 2340.0034
GLN 2350.0053
GLN 2360.0075
ALA 2370.0060
GLU 2380.0093
ARG 2390.0086
ARG 2400.0095
ILE 2410.0054
PRO 2420.0039
VAL 2430.0026
GLN 2440.0024
TYR 2450.0024
ALA 2460.0040
ARG 2470.0047
LYS 2480.0038
VAL 2490.0035
VAL 2500.0072
GLY 2510.0153
GLY 2520.0155
ARG 2530.0046
VAL 2540.0067
TYR 2550.0077
GLY 2560.0064
GLY 2570.0072
GLN 2580.0112
ALA 2590.0019
THR 2600.0042
TYR 2610.0069
ILE 2620.0066
PRO 2630.0085
ILE 2640.0071
LYS 2650.0047
LEU 2660.0034
ASN 2670.0016
ALA 2680.0052
ALA 2690.0068
GLY 2700.0044
VAL 2710.0053
ILE 2720.0059
PRO 2730.0058
ILE 2740.0067
ILE 2750.0073
PHE 2760.0074
ALA 2770.0086
ALA 2780.0083
ALA 2790.0092
ILE 2800.0124
LEU 2810.0120
GLN 2820.0122
ILE 2830.0181
PRO 2840.0182
ILE 2850.0176
PHE 2860.0126
LEU 2870.0106
ALA 2880.0120
ALA 2890.0154
PRO 2900.0046
PHE 2910.0138
GLN 2920.0243
ASP 2930.0402
ASN 2940.0408
PRO 2950.0524
VAL 2960.0405
LEU 2970.0229
GLN 2980.0290
GLY 2990.0355
ILE 3000.0298
ALA 3010.0265
ASN 3020.0249
PHE 3030.0262
PHE 3040.0217
ASN 3050.0179
PRO 3060.0137
THR 3070.0112
ARG 3080.0135
PRO 3090.0126
SER 3100.0135
GLY 3110.0141
LEU 3120.0083
PHE 3130.0076
ILE 3140.0121
GLU 3150.0094
VAL 3160.0032
LEU 3170.0064
LEU 3180.0089
VAL 3190.0061
ILE 3200.0045
LEU 3210.0058
PHE 3220.0058
THR 3230.0053
TYR 3240.0049
VAL 3250.0027
TYR 3260.0033
THR 3270.0034
ALA 3280.0012
VAL 3290.0023
GLN 3300.0042
PHE 3310.0038
ASP 3320.0059
PRO 3330.0052
LYS 3340.0033
ARG 3350.0063
ILE 3360.0064
ALA 3370.0032
GLU 3380.0075
SER 3390.0124
LEU 3400.0086
ARG 3410.0099
GLU 3420.0162
TYR 3430.0162
GLY 3440.0116
GLY 3450.0015
PHE 3460.0021
ILE 3470.0008
PRO 3480.0013
GLY 3490.0073
ILE 3500.0055
ARG 3510.0093
PRO 3520.0037
GLY 3530.0053
GLU 3540.0059
PRO 3550.0053
THR 3560.0028
VAL 3570.0032
LYS 3580.0041
PHE 3590.0028
LEU 3600.0008
GLU 3610.0013
HIS 3620.0015
ILE 3630.0029
VAL 3640.0034
SER 3650.0046
ARG 3660.0036
LEU 3670.0042
THR 3680.0040
LEU 3690.0044
TRP 3700.0036
GLY 3710.0037
ALA 3720.0036
LEU 3730.0052
PHE 3740.0083
LEU 3750.0090
GLY 3760.0100
LEU 3770.0150
VAL 3780.0150
THR 3790.0108
LEU 3800.0165
LEU 3810.0262
PRO 3820.0223
GLN 3830.0251
ILE 3840.0365
ILE 3850.0341
GLN 3860.0257
ASN 3870.0418
LEU 3880.0501
THR 3890.0293
GLY 3900.0383
ILE 3910.0175
HIS 3920.0228
SER 3930.0153
ILE 3940.0068
ALA 3950.0062
PHE 3960.0041
SER 3970.0043
GLY 3980.0076
ILE 3990.0043
GLY 4000.0035
LEU 4010.0067
LEU 4020.0068
ILE 4030.0037
VAL 4040.0044
VAL 4050.0051
GLY 4060.0035
VAL 4070.0040
ALA 4080.0036
LEU 4090.0057
ASP 4100.0050
THR 4110.0038
LEU 4120.0081
ARG 4130.0080
GLN 4140.0073
VAL 4150.0086
GLU 4160.0083
SER 4170.0086
GLN 4180.0083
LEU 4190.0061
MET 4200.0060
LEU 4210.0053
ARG 4220.0059
SER 4230.0042
TYR 4240.0202
MET 10.0209
PHE 20.0139
ALA 30.0023
ARG 40.0115
LEU 50.0158
ILE 60.0128
ARG 70.0127
TYR 80.0108
PHE 90.0084
GLN 100.0081
GLU 110.0069
ALA 120.0049
ARG 130.0052
ALA 140.0053
GLU 150.0051
LEU 160.0067
ALA 170.0083
ARG 180.0084
VAL 190.0105
THR 200.0123
TRP 210.0114
PRO 220.0095
THR 230.0163
ARG 240.0280
GLU 250.0234
GLN 260.0174
VAL 270.0133
VAL 280.0156
GLU 290.0181
GLY 300.0153
THR 310.0126
GLN 320.0144
ALA 330.0132
ILE 340.0113
LEU 350.0106
LEU 360.0103
PHE 370.0056
THR 380.0048
LEU 390.0044
ALA 400.0022
PHE 410.0020
MET 420.0025
VAL 430.0024
ILE 440.0019
LEU 450.0023
GLY 460.0049
LEU 470.0052
TYR 480.0042
ASP 490.0057
THR 500.0069
VAL 510.0058
PHE 520.0053
ARG 530.0074
PHE 540.0070
LEU 550.0064
ILE 560.0085
GLY 570.0082
LEU 580.0064
LEU 590.0042
ARG 600.0030
MET 10.0186
ASP 20.0195
LEU 30.0127
LEU 40.0043
TYR 50.0050
THR 60.0109
LEU 70.0103
VAL 80.0102
ILE 90.0101
LEU 100.0117
PHE 110.0109
TYR 120.0055
LEU 130.0042
GLY 140.0049
VAL 150.0072
ALA 160.0052
GLY 170.0065
LEU 180.0102
LEU 190.0103
VAL 200.0115
TYR 210.0139
LEU 220.0130
VAL 230.0130
LEU 240.0142
VAL 250.0150
GLN 260.0130
GLU 270.0140
PRO 280.0109
LYS 290.0069
GLN 300.0105
GLY 310.0155
ALA 320.0197
GLY 330.0222
ASP 340.0132
LEU 350.0111
MET 360.0094
GLY 370.0097
GLY 380.0107
SER 390.0129
ALA 400.0109
ASP 410.0103
LEU 420.0128
PHE 430.0125
SER 440.0096
ALA 450.0072
ARG 460.0025
GLY 470.0078
VAL 480.0089
THR 490.0101
GLY 500.0098
GLY 510.0115
LEU 520.0124
TYR 530.0112
ARG 540.0109
LEU 550.0133
THR 560.0135
VAL 570.0140
ILE 580.0156
LEU 590.0135
GLY 600.0137
VAL 610.0157
VAL 620.0122
PHE 630.0064
ALA 640.0066
ALA 650.0070
LEU 660.0049
ALA 670.0020
LEU 680.0030
VAL 690.0083
ILE 700.0073
GLY 710.0068
LEU 720.0125
TRP 730.0207
PRO 740.0261
ARG 750.0306

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.