Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  PROTEIN TRANSPORT/IMMUNE SYSTEM 10-JUL-15 5AWW  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.0463
MET 1
0.0112
VAL 2
0.0179
LYS 3
0.0190
ALA 4
0.0091
PHE 5
0.0131
TRP 6
0.0177
SER 7
0.0098
ALA 8
0.0125
LEU 9
0.0234
GLN 10
0.0315
ILE 11
0.0267
PRO 12
0.0251
GLU 13
0.0169
LEU 14
0.0146
ARG 15
0.0194
GLN 16
0.0043
ARG 17
0.0051
VAL 18
0.0105
LEU 19
0.0093
PHE 20
0.0088
THR 21
0.0109
LEU 22
0.0106
LEU 23
0.0109
VAL 24
0.0104
LEU 25
0.0079
ALA 26
0.0101
ALA 27
0.0102
TYR 28
0.0088
ARG 29
0.0108
LEU 30
0.0111
GLY 31
0.0090
ALA 32
0.0119
PHE 33
0.0129
ILE 34
0.0049
PRO 35
0.0047
THR 36
0.0048
PRO 37
0.0047
GLY 38
0.0043
VAL 39
0.0038
ASP 40
0.0040
LEU 41
0.0033
ASP 42
0.0044
LYS 43
0.0070
ILE 44
0.0084
GLN 45
0.0094
GLU 46
0.0097
PHE 47
0.0115
LEU 48
0.0143
ARG 49
0.0164
THR 50
0.0142
ALA 51
0.0158
GLN 52
0.0153
GLY 53
0.0168
GLY 54
0.0179
VAL 55
0.0129
PHE 56
0.0145
GLY 57
0.0142
ILE 58
0.0083
ILE 59
0.0094
ASN 60
0.0087
LEU 61
0.0035
PHE 62
0.0037
SER 63
0.0052
GLY 64
0.0047
GLY 65
0.0042
ASN 66
0.0063
PHE 67
0.0080
GLU 68
0.0054
ARG 69
0.0069
PHE 70
0.0036
SER 71
0.0044
ILE 72
0.0057
PHE 73
0.0054
ALA 74
0.0039
LEU 75
0.0038
GLY 76
0.0035
ILE 77
0.0027
MET 78
0.0016
PRO 79
0.0015
TYR 80
0.0031
ILE 81
0.0026
THR 82
0.0023
ALA 83
0.0033
ALA 84
0.0055
ILE 85
0.0055
ILE 86
0.0031
MET 87
0.0067
GLN 88
0.0151
ILE 89
0.0148
LEU 90
0.0084
VAL 91
0.0120
THR 92
0.0171
VAL 93
0.0157
VAL 94
0.0129
PRO 95
0.0111
ALA 96
0.0123
LEU 97
0.0084
GLU 98
0.0082
LYS 99
0.0066
LEU 100
0.0039
SER 101
0.0097
LYS 102
0.0118
GLU 103
0.0158
GLY 104
0.0161
GLU 105
0.0119
GLU 106
0.0117
GLY 107
0.0092
ARG 108
0.0104
ARG 109
0.0157
ILE 110
0.0167
ILE 111
0.0164
ASN 112
0.0136
GLN 113
0.0127
TYR 114
0.0132
THR 115
0.0098
ARG 116
0.0071
ILE 117
0.0066
GLY 118
0.0059
GLY 119
0.0042
ILE 120
0.0021
ALA 121
0.0037
LEU 122
0.0035
GLY 123
0.0031
ALA 124
0.0045
PHE 125
0.0057
GLN 126
0.0058
GLY 127
0.0067
PHE 128
0.0069
PHE 129
0.0083
LEU 130
0.0076
ALA 131
0.0069
THR 132
0.0069
ALA 133
0.0091
PHE 134
0.0088
LEU 135
0.0080
GLY 136
0.0075
ALA 137
0.0074
GLU 138
0.0075
GLY 139
0.0071
GLY 140
0.0076
ARG 141
0.0066
PHE 142
0.0056
LEU 143
0.0054
LEU 144
0.0063
PRO 145
0.0109
GLY 146
0.0130
TRP 147
0.0118
SER 148
0.0105
PRO 149
0.0109
GLY 150
0.0117
PRO 151
0.0124
PHE 152
0.0122
PHE 153
0.0101
TRP 154
0.0100
PHE 155
0.0094
VAL 156
0.0096
VAL 157
0.0074
VAL 158
0.0072
VAL 159
0.0068
THR 160
0.0051
GLN 161
0.0046
VAL 162
0.0046
ALA 163
0.0050
GLY 164
0.0046
ILE 165
0.0034
ALA 166
0.0061
LEU 167
0.0055
LEU 168
0.0055
LEU 169
0.0062
TRP 170
0.0075
MET 171
0.0093
ALA 172
0.0094
GLU 173
0.0091
ARG 174
0.0099
ILE 175
0.0064
THR 176
0.0073
GLU 177
0.0067
TYR 178
0.0059
GLY 179
0.0064
ILE 180
0.0072
GLY 181
0.0051
ASN 182
0.0066
GLY 183
0.0069
THR 184
0.0059
SER 185
0.0058
LEU 186
0.0055
ILE 187
0.0043
ILE 188
0.0032
PHE 189
0.0047
ALA 190
0.0045
GLY 191
0.0034
ILE 192
0.0026
VAL 193
0.0022
VAL 194
0.0038
GLU 195
0.0020
TRP 196
0.0027
LEU 197
0.0024
PRO 198
0.0018
GLN 199
0.0046
ILE 200
0.0058
LEU 201
0.0062
ARG 202
0.0074
THR 203
0.0086
ILE 204
0.0071
GLY 205
0.0109
LEU 206
0.0089
ILE 207
0.0050
ARG 208
0.0201
THR 209
0.0124
GLY 210
0.0121
GLU 211
0.0066
VAL 212
0.0067
ASN 213
0.0069
LEU 214
0.0131
VAL 215
0.0123
ALA 216
0.0059
PHE 217
0.0038
LEU 218
0.0073
PHE 219
0.0064
PHE 220
0.0039
LEU 221
0.0066
ALA 222
0.0066
PHE 223
0.0110
ILE 224
0.0121
VAL 225
0.0124
LEU 226
0.0138
ALA 227
0.0130
PHE 228
0.0123
ALA 229
0.0125
GLY 230
0.0119
MET 231
0.0098
ALA 232
0.0084
ALA 233
0.0068
VAL 234
0.0086
GLN 235
0.0064
GLN 236
0.0054
ALA 237
0.0078
GLU 238
0.0042
ARG 239
0.0042
ARG 240
0.0045
ILE 241
0.0116
PRO 242
0.0124
VAL 243
0.0130
GLN 244
0.0135
TYR 245
0.0150
ALA 246
0.0162
ARG 247
0.0318
LYS 248
0.0325
VAL 249
0.0258
VAL 250
0.0405
GLY 251
0.0415
GLY 252
0.0230
ARG 253
0.0199
VAL 254
0.0250
TYR 255
0.0347
GLY 256
0.0166
GLY 257
0.0169
GLN 258
0.0152
ALA 259
0.0081
THR 260
0.0063
TYR 261
0.0086
ILE 262
0.0080
PRO 263
0.0045
ILE 264
0.0041
LYS 265
0.0059
LEU 266
0.0068
ASN 267
0.0061
ALA 268
0.0057
ALA 269
0.0039
GLY 270
0.0042
VAL 271
0.0060
ILE 272
0.0048
PRO 273
0.0062
ILE 274
0.0065
ILE 275
0.0053
PHE 276
0.0050
ALA 277
0.0064
ALA 278
0.0061
ALA 279
0.0066
ILE 280
0.0067
LEU 281
0.0046
GLN 282
0.0062
ILE 283
0.0102
PRO 284
0.0071
ILE 285
0.0056
PHE 286
0.0098
LEU 287
0.0101
ALA 288
0.0094
ALA 289
0.0098
PRO 290
0.0141
PHE 291
0.0126
GLN 292
0.0123
ASP 293
0.0120
ASN 294
0.0029
PRO 295
0.0170
VAL 296
0.0208
LEU 297
0.0102
GLN 298
0.0086
GLY 299
0.0192
ILE 300
0.0156
ALA 301
0.0049
ASN 302
0.0145
PHE 303
0.0177
PHE 304
0.0080
ASN 305
0.0100
PRO 306
0.0079
THR 307
0.0184
ARG 308
0.0226
PRO 309
0.0241
SER 310
0.0217
GLY 311
0.0124
LEU 312
0.0081
PHE 313
0.0125
ILE 314
0.0116
GLU 315
0.0054
VAL 316
0.0059
LEU 317
0.0092
LEU 318
0.0088
VAL 319
0.0081
ILE 320
0.0077
LEU 321
0.0070
PHE 322
0.0055
THR 323
0.0050
TYR 324
0.0065
VAL 325
0.0084
TYR 326
0.0071
THR 327
0.0069
ALA 328
0.0101
VAL 329
0.0125
GLN 330
0.0106
PHE 331
0.0100
ASP 332
0.0137
PRO 333
0.0099
LYS 334
0.0228
ARG 335
0.0267
ILE 336
0.0200
ALA 337
0.0079
GLU 338
0.0149
SER 339
0.0226
LEU 340
0.0098
ARG 341
0.0182
GLU 342
0.0242
TYR 343
0.0287
GLY 344
0.0351
GLY 345
0.0177
PHE 346
0.0235
ILE 347
0.0228
PRO 348
0.0199
GLY 349
0.0168
ILE 350
0.0198
ARG 351
0.0211
PRO 352
0.0160
GLY 353
0.0134
GLU 354
0.0140
PRO 355
0.0127
THR 356
0.0101
VAL 357
0.0132
LYS 358
0.0156
PHE 359
0.0171
LEU 360
0.0130
GLU 361
0.0125
HIS 362
0.0148
ILE 363
0.0144
VAL 364
0.0107
SER 365
0.0056
ARG 366
0.0062
LEU 367
0.0092
THR 368
0.0088
LEU 369
0.0078
TRP 370
0.0103
GLY 371
0.0085
ALA 372
0.0084
LEU 373
0.0111
PHE 374
0.0100
LEU 375
0.0091
GLY 376
0.0103
LEU 377
0.0117
VAL 378
0.0114
THR 379
0.0085
LEU 380
0.0075
LEU 381
0.0091
PRO 382
0.0083
GLN 383
0.0049
ILE 384
0.0050
ILE 385
0.0064
GLN 386
0.0058
ASN 387
0.0051
LEU 388
0.0062
THR 389
0.0051
GLY 390
0.0050
ILE 391
0.0032
HIS 392
0.0038
SER 393
0.0035
ILE 394
0.0031
ALA 395
0.0015
PHE 396
0.0027
SER 397
0.0044
GLY 398
0.0066
ILE 399
0.0059
GLY 400
0.0065
LEU 401
0.0079
LEU 402
0.0078
ILE 403
0.0064
VAL 404
0.0076
VAL 405
0.0080
GLY 406
0.0069
VAL 407
0.0069
ALA 408
0.0074
LEU 409
0.0050
ASP 410
0.0043
THR 411
0.0051
LEU 412
0.0046
ARG 413
0.0048
GLN 414
0.0036
VAL 415
0.0079
GLU 416
0.0109
SER 417
0.0086
GLN 418
0.0114
LEU 419
0.0165
MET 420
0.0150
LEU 421
0.0060
ARG 422
0.0181
SER 423
0.0199
TYR 424
0.0421
MET 1
0.0358
PHE 2
0.0172
ALA 3
0.0203
ARG 4
0.0250
LEU 5
0.0259
ILE 6
0.0252
ARG 7
0.0169
TYR 8
0.0129
PHE 9
0.0149
GLN 10
0.0084
GLU 11
0.0026
ALA 12
0.0087
ARG 13
0.0143
ALA 14
0.0155
GLU 15
0.0159
LEU 16
0.0187
ALA 17
0.0229
ARG 18
0.0228
VAL 19
0.0142
THR 20
0.0121
TRP 21
0.0111
PRO 22
0.0063
THR 23
0.0100
ARG 24
0.0069
GLU 25
0.0207
GLN 26
0.0148
VAL 27
0.0115
VAL 28
0.0174
GLU 29
0.0170
GLY 30
0.0090
THR 31
0.0107
GLN 32
0.0151
ALA 33
0.0102
ILE 34
0.0091
LEU 35
0.0102
LEU 36
0.0107
PHE 37
0.0087
THR 38
0.0086
LEU 39
0.0089
ALA 40
0.0064
PHE 41
0.0046
MET 42
0.0041
VAL 43
0.0075
ILE 44
0.0095
LEU 45
0.0093
GLY 46
0.0178
LEU 47
0.0207
TYR 48
0.0194
ASP 49
0.0245
THR 50
0.0309
VAL 51
0.0264
PHE 52
0.0213
ARG 53
0.0266
PHE 54
0.0277
LEU 55
0.0261
ILE 56
0.0246
GLY 57
0.0251
LEU 58
0.0358
LEU 59
0.0152
ARG 60
0.0224
MET 1
0.0135
ASP 2
0.0226
LEU 3
0.0182
LEU 4
0.0019
TYR 5
0.0063
THR 6
0.0055
LEU 7
0.0078
VAL 8
0.0094
ILE 9
0.0114
LEU 10
0.0132
PHE 11
0.0118
TYR 12
0.0092
LEU 13
0.0094
GLY 14
0.0096
VAL 15
0.0079
ALA 16
0.0071
GLY 17
0.0057
LEU 18
0.0071
LEU 19
0.0064
VAL 20
0.0048
TYR 21
0.0049
LEU 22
0.0037
VAL 23
0.0041
LEU 24
0.0047
VAL 25
0.0069
GLN 26
0.0071
GLU 27
0.0136
PRO 28
0.0159
LYS 29
0.0245
GLN 30
0.0182
GLY 31
0.0239
ALA 32
0.0261
GLY 33
0.0259
ASP 34
0.0116
LEU 35
0.0059
MET 36
0.0047
GLY 37
0.0074
GLY 38
0.0064
SER 39
0.0174
ALA 40
0.0149
ASP 41
0.0233
LEU 42
0.0270
PHE 43
0.0329
SER 44
0.0403
ALA 45
0.0463
ARG 46
0.0305
GLY 47
0.0240
VAL 48
0.0373
THR 49
0.0208
GLY 50
0.0219
GLY 51
0.0214
LEU 52
0.0178
TYR 53
0.0160
ARG 54
0.0165
LEU 55
0.0153
THR 56
0.0120
VAL 57
0.0122
ILE 58
0.0144
LEU 59
0.0096
GLY 60
0.0075
VAL 61
0.0059
VAL 62
0.0067
PHE 63
0.0044
ALA 64
0.0010
ALA 65
0.0034
LEU 66
0.0043
ALA 67
0.0026
LEU 68
0.0032
VAL 69
0.0063
ILE 70
0.0057
GLY 71
0.0030
LEU 72
0.0015
TRP 73
0.0031
PRO 74
0.0102
ARG 75
0.0206
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.