CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN TRANSPORT/IMMUNE SYSTEM 10-JUL-15 5AWW  ***

<R2> analysis for 2602160914402522044

---  normal mode 87  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0411
MET 10.0061
VAL 20.0088
LYS 30.0086
ALA 40.0028
PHE 50.0056
TRP 60.0082
SER 70.0022
ALA 80.0054
LEU 90.0050
GLN 100.0024
ILE 110.0047
PRO 120.0055
GLU 130.0067
LEU 140.0080
ARG 150.0059
GLN 160.0057
ARG 170.0072
VAL 180.0124
LEU 190.0128
PHE 200.0095
THR 210.0103
LEU 220.0133
LEU 230.0130
VAL 240.0090
LEU 250.0073
ALA 260.0102
ALA 270.0097
TYR 280.0057
ARG 290.0049
LEU 300.0076
GLY 310.0069
ALA 320.0054
PHE 330.0065
ILE 340.0069
PRO 350.0070
THR 360.0066
PRO 370.0047
GLY 380.0048
VAL 390.0049
ASP 400.0107
LEU 410.0079
ASP 420.0084
LYS 430.0107
ILE 440.0088
GLN 450.0065
GLU 460.0159
PHE 470.0131
LEU 480.0069
ARG 490.0200
THR 500.0185
ALA 510.0134
GLN 520.0084
GLY 530.0064
GLY 540.0022
VAL 550.0060
PHE 560.0056
GLY 570.0053
ILE 580.0035
ILE 590.0034
ASN 600.0034
LEU 610.0025
PHE 620.0033
SER 630.0025
GLY 640.0019
GLY 650.0015
ASN 660.0020
PHE 670.0025
GLU 680.0025
ARG 690.0036
PHE 700.0050
SER 710.0052
ILE 720.0059
PHE 730.0038
ALA 740.0047
LEU 750.0045
GLY 760.0045
ILE 770.0051
MET 780.0071
PRO 790.0096
TYR 800.0092
ILE 810.0098
THR 820.0092
ALA 830.0051
ALA 840.0092
ILE 850.0117
ILE 860.0098
MET 870.0183
GLN 880.0207
ILE 890.0156
LEU 900.0205
VAL 910.0224
THR 920.0094
VAL 930.0150
VAL 940.0310
PRO 950.0270
ALA 960.0277
LEU 970.0235
GLU 980.0182
LYS 990.0133
LEU 1000.0217
SER 1010.0254
LYS 1020.0240
GLU 1030.0227
GLY 1040.0094
GLU 1050.0111
GLU 1060.0207
GLY 1070.0184
ARG 1080.0084
ARG 1090.0090
ILE 1100.0167
ILE 1110.0156
ASN 1120.0048
GLN 1130.0085
TYR 1140.0108
THR 1150.0063
ARG 1160.0060
ILE 1170.0059
GLY 1180.0067
GLY 1190.0073
ILE 1200.0063
ALA 1210.0087
LEU 1220.0088
GLY 1230.0073
ALA 1240.0092
PHE 1250.0107
GLN 1260.0094
GLY 1270.0092
PHE 1280.0090
PHE 1290.0068
LEU 1300.0066
ALA 1310.0064
THR 1320.0068
ALA 1330.0075
PHE 1340.0072
LEU 1350.0066
GLY 1360.0120
ALA 1370.0123
GLU 1380.0102
GLY 1390.0142
GLY 1400.0129
ARG 1410.0099
PHE 1420.0089
LEU 1430.0092
LEU 1440.0092
PRO 1450.0100
GLY 1460.0092
TRP 1470.0074
SER 1480.0152
PRO 1490.0154
GLY 1500.0140
PRO 1510.0106
PHE 1520.0083
PHE 1530.0065
TRP 1540.0088
PHE 1550.0066
VAL 1560.0044
VAL 1570.0054
VAL 1580.0051
VAL 1590.0034
THR 1600.0048
GLN 1610.0046
VAL 1620.0054
ALA 1630.0058
GLY 1640.0050
ILE 1650.0045
ALA 1660.0065
LEU 1670.0056
LEU 1680.0046
LEU 1690.0041
TRP 1700.0038
MET 1710.0013
ALA 1720.0016
GLU 1730.0037
ARG 1740.0029
ILE 1750.0052
THR 1760.0065
GLU 1770.0062
TYR 1780.0055
GLY 1790.0078
ILE 1800.0108
GLY 1810.0082
ASN 1820.0050
GLY 1830.0021
THR 1840.0034
SER 1850.0042
LEU 1860.0034
ILE 1870.0026
ILE 1880.0035
PHE 1890.0047
ALA 1900.0042
GLY 1910.0044
ILE 1920.0058
VAL 1930.0057
VAL 1940.0046
GLU 1950.0056
TRP 1960.0071
LEU 1970.0073
PRO 1980.0083
GLN 1990.0094
ILE 2000.0084
LEU 2010.0078
ARG 2020.0071
THR 2030.0100
ILE 2040.0059
GLY 2050.0046
LEU 2060.0069
ILE 2070.0069
ARG 2080.0091
THR 2090.0033
GLY 2100.0127
GLU 2110.0044
VAL 2120.0022
ASN 2130.0099
LEU 2140.0159
VAL 2150.0187
ALA 2160.0173
PHE 2170.0075
LEU 2180.0045
PHE 2190.0096
PHE 2200.0150
LEU 2210.0153
ALA 2220.0164
PHE 2230.0124
ILE 2240.0107
VAL 2250.0125
LEU 2260.0159
ALA 2270.0129
PHE 2280.0064
ALA 2290.0090
GLY 2300.0115
MET 2310.0114
ALA 2320.0126
ALA 2330.0117
VAL 2340.0108
GLN 2350.0114
GLN 2360.0103
ALA 2370.0067
GLU 2380.0092
ARG 2390.0176
ARG 2400.0206
ILE 2410.0135
PRO 2420.0117
VAL 2430.0107
GLN 2440.0223
TYR 2450.0160
ALA 2460.0180
ARG 2470.0364
LYS 2480.0342
VAL 2490.0307
VAL 2500.0256
GLY 2510.0328
GLY 2520.0134
ARG 2530.0070
VAL 2540.0320
TYR 2550.0367
GLY 2560.0354
GLY 2570.0249
GLN 2580.0168
ALA 2590.0139
THR 2600.0154
TYR 2610.0167
ILE 2620.0106
PRO 2630.0104
ILE 2640.0122
LYS 2650.0107
LEU 2660.0096
ASN 2670.0130
ALA 2680.0184
ALA 2690.0205
GLY 2700.0167
VAL 2710.0102
ILE 2720.0139
PRO 2730.0123
ILE 2740.0077
ILE 2750.0103
PHE 2760.0099
ALA 2770.0065
ALA 2780.0090
ALA 2790.0078
ILE 2800.0068
LEU 2810.0073
GLN 2820.0083
ILE 2830.0074
PRO 2840.0063
ILE 2850.0064
PHE 2860.0062
LEU 2870.0054
ALA 2880.0063
ALA 2890.0086
PRO 2900.0103
PHE 2910.0098
GLN 2920.0141
ASP 2930.0153
ASN 2940.0085
PRO 2950.0225
VAL 2960.0184
LEU 2970.0086
GLN 2980.0102
GLY 2990.0117
ILE 3000.0070
ALA 3010.0116
ASN 3020.0136
PHE 3030.0120
PHE 3040.0148
ASN 3050.0165
PRO 3060.0183
THR 3070.0247
ARG 3080.0274
PRO 3090.0279
SER 3100.0235
GLY 3110.0217
LEU 3120.0216
PHE 3130.0234
ILE 3140.0178
GLU 3150.0148
VAL 3160.0134
LEU 3170.0111
LEU 3180.0045
VAL 3190.0039
ILE 3200.0049
LEU 3210.0076
PHE 3220.0118
THR 3230.0104
TYR 3240.0124
VAL 3250.0189
TYR 3260.0177
THR 3270.0162
ALA 3280.0235
VAL 3290.0289
GLN 3300.0246
PHE 3310.0163
ASP 3320.0182
PRO 3330.0151
LYS 3340.0114
ARG 3350.0143
ILE 3360.0143
ALA 3370.0197
GLU 3380.0227
SER 3390.0237
LEU 3400.0176
ARG 3410.0177
GLU 3420.0178
TYR 3430.0163
GLY 3440.0099
GLY 3450.0193
PHE 3460.0122
ILE 3470.0134
PRO 3480.0151
GLY 3490.0225
ILE 3500.0117
ARG 3510.0177
PRO 3520.0174
GLY 3530.0315
GLU 3540.0411
PRO 3550.0306
THR 3560.0226
VAL 3570.0132
LYS 3580.0282
PHE 3590.0243
LEU 3600.0172
GLU 3610.0321
HIS 3620.0345
ILE 3630.0311
VAL 3640.0295
SER 3650.0293
ARG 3660.0266
LEU 3670.0187
THR 3680.0204
LEU 3690.0171
TRP 3700.0103
GLY 3710.0089
ALA 3720.0090
LEU 3730.0075
PHE 3740.0065
LEU 3750.0067
GLY 3760.0086
LEU 3770.0088
VAL 3780.0094
THR 3790.0104
LEU 3800.0122
LEU 3810.0096
PRO 3820.0091
GLN 3830.0101
ILE 3840.0124
ILE 3850.0134
GLN 3860.0162
ASN 3870.0162
LEU 3880.0240
THR 3890.0286
GLY 3900.0330
ILE 3910.0228
HIS 3920.0212
SER 3930.0231
ILE 3940.0144
ALA 3950.0139
PHE 3960.0130
SER 3970.0106
GLY 3980.0106
ILE 3990.0105
GLY 4000.0092
LEU 4010.0084
LEU 4020.0094
ILE 4030.0050
VAL 4040.0053
VAL 4050.0060
GLY 4060.0030
VAL 4070.0033
ALA 4080.0025
LEU 4090.0013
ASP 4100.0027
THR 4110.0026
LEU 4120.0019
ARG 4130.0012
GLN 4140.0015
VAL 4150.0015
GLU 4160.0010
SER 4170.0014
GLN 4180.0026
LEU 4190.0015
MET 4200.0031
LEU 4210.0003
ARG 4220.0064
SER 4230.0101
TYR 4240.0075
MET 10.0374
PHE 20.0184
ALA 30.0269
ARG 40.0327
LEU 50.0334
ILE 60.0312
ARG 70.0219
TYR 80.0181
PHE 90.0189
GLN 100.0082
GLU 110.0066
ALA 120.0170
ARG 130.0052
ALA 140.0157
GLU 150.0229
LEU 160.0151
ALA 170.0221
ARG 180.0303
VAL 190.0149
THR 200.0143
TRP 210.0101
PRO 220.0166
THR 230.0167
ARG 240.0155
GLU 250.0213
GLN 260.0183
VAL 270.0158
VAL 280.0172
GLU 290.0145
GLY 300.0106
THR 310.0080
GLN 320.0101
ALA 330.0047
ILE 340.0020
LEU 350.0047
LEU 360.0072
PHE 370.0052
THR 380.0062
LEU 390.0068
ALA 400.0052
PHE 410.0061
MET 420.0066
VAL 430.0087
ILE 440.0075
LEU 450.0053
GLY 460.0070
LEU 470.0080
TYR 480.0060
ASP 490.0044
THR 500.0048
VAL 510.0050
PHE 520.0051
ARG 530.0057
PHE 540.0076
LEU 550.0080
ILE 560.0075
GLY 570.0085
LEU 580.0108
LEU 590.0121
ARG 600.0106
MET 10.0194
ASP 20.0169
LEU 30.0225
LEU 40.0231
TYR 50.0187
THR 60.0148
LEU 70.0164
VAL 80.0180
ILE 90.0164
LEU 100.0197
PHE 110.0196
TYR 120.0111
LEU 130.0132
GLY 140.0118
VAL 150.0057
ALA 160.0040
GLY 170.0060
LEU 180.0059
LEU 190.0064
VAL 200.0067
TYR 210.0074
LEU 220.0039
VAL 230.0028
LEU 240.0049
VAL 250.0055
GLN 260.0045
GLU 270.0086
PRO 280.0094
LYS 290.0115
GLN 300.0140
GLY 310.0239
ALA 320.0316
GLY 330.0393
ASP 340.0205
LEU 350.0124
MET 360.0116
GLY 370.0130
GLY 380.0122
SER 390.0111
ALA 400.0127
ASP 410.0124
LEU 420.0200
PHE 430.0197
SER 440.0156
ALA 450.0103
ARG 460.0114
GLY 470.0083
VAL 480.0081
THR 490.0060
GLY 500.0116
GLY 510.0157
LEU 520.0100
TYR 530.0081
ARG 540.0104
LEU 550.0080
THR 560.0073
VAL 570.0083
ILE 580.0127
LEU 590.0113
GLY 600.0134
VAL 610.0217
VAL 620.0171
PHE 630.0091
ALA 640.0116
ALA 650.0110
LEU 660.0041
ALA 670.0054
LEU 680.0047
VAL 690.0079
ILE 700.0103
GLY 710.0135
LEU 720.0173
TRP 730.0289
PRO 740.0216
ARG 750.0178

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.