CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN TRANSPORT 21-NOV-13 4CG7  ***

<R2> analysis for 2602160935392533103

---  normal mode 104  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0519
LYS 250.0101
ILE 260.0119
GLN 270.0084
PHE 280.0080
LYS 290.0053
GLU 300.0056
LYS 310.0051
VAL 320.0049
LEU 330.0058
TRP 340.0056
THR 350.0057
ALA 360.0064
ILE 370.0079
THR 380.0088
LEU 390.0083
PHE 400.0087
ILE 410.0085
PHE 420.0090
LEU 430.0097
VAL 440.0088
CYS 450.0067
CYS 460.0029
GLN 470.0053
ILE 480.0054
PRO 490.0049
LEU 500.0047
PHE 510.0060
GLY 520.0076
ILE 530.0105
MET 540.0103
SER 550.0128
SER 560.0071
ASP 570.0031
SER 580.0060
ALA 590.0069
ASP 600.0068
PRO 610.0088
PHE 620.0102
TYR 630.0102
TRP 640.0082
MET 650.0073
ARG 660.0095
VAL 670.0094
ILE 680.0085
LEU 690.0081
ALA 700.0113
SER 710.0108
ASN 720.0100
ARG 730.0049
GLY 740.0050
THR 750.0045
LEU 760.0115
MET 770.0094
GLU 780.0088
LEU 790.0053
GLY 800.0055
ILE 810.0055
SER 820.0027
PRO 830.0014
ILE 840.0012
VAL 850.0057
THR 860.0058
SER 870.0072
GLY 880.0104
LEU 890.0110
ILE 900.0135
MET 910.0165
GLN 920.0148
LEU 930.0167
LEU 940.0177
ALA 950.0175
GLY 960.0185
ALA 970.0217
LYS 980.0110
ILE 990.0124
ILE 1000.0314
GLU 1010.0210
VAL 1020.0302
GLY 1030.0242
ASP 1040.0237
THR 1050.0172
PRO 1060.0174
LYS 1070.0175
ASP 1080.0246
ARG 1090.0140
ALA 1100.0084
LEU 1110.0118
PHE 1120.0110
ASN 1130.0147
GLY 1140.0136
ALA 1150.0135
GLN 1160.0127
LYS 1170.0136
LEU 1180.0122
PHE 1190.0077
GLY 1200.0064
MET 1210.0067
ILE 1220.0082
ILE 1230.0058
THR 1240.0052
ILE 1250.0113
GLY 1260.0138
GLN 1270.0106
SER 1280.0079
ILE 1290.0099
VAL 1300.0091
TYR 1310.0071
VAL 1320.0059
MET 1330.0060
THR 1340.0088
GLY 1350.0095
MET 1360.0078
TYR 1370.0101
GLY 1380.0178
ASP 1390.0132
PRO 1400.0113
SER 1410.0081
GLU 1420.0168
MET 1430.0161
GLY 1440.0171
ALA 1450.0192
GLY 1460.0201
ILE 1470.0064
CYS 1480.0092
LEU 1490.0142
LEU 1500.0067
ILE 1510.0045
THR 1520.0128
ILE 1530.0080
GLN 1540.0042
LEU 1550.0089
PHE 1560.0101
VAL 1570.0081
ALA 1580.0136
GLY 1590.0147
LEU 1600.0110
ILE 1610.0116
VAL 1620.0126
LEU 1630.0092
LEU 1640.0086
LEU 1650.0114
ASP 1660.0121
GLU 1670.0122
LEU 1680.0128
LEU 1690.0127
GLN 1700.0151
LYS 1710.0133
GLY 1720.0123
TYR 1730.0064
GLY 1740.0058
LEU 1750.0033
GLY 1760.0062
SER 1770.0081
GLY 1780.0076
ILE 1790.0055
SER 1800.0073
LEU 1810.0107
PHE 1820.0107
ILE 1830.0105
ALA 1840.0176
THR 1850.0182
ASN 1860.0181
ILE 1870.0163
CYS 1880.0126
GLU 1890.0168
THR 1900.0163
ILE 1910.0111
VAL 1920.0101
TRP 1930.0153
LYS 1940.0202
ALA 1950.0187
PHE 1960.0193
SER 1970.0183
PRO 1980.0166
THR 1990.0332
THR 2000.0300
VAL 2010.0302
ASN 2020.0397
THR 2030.0167
GLY 2040.0148
ARG 2050.0081
GLY 2060.0125
MET 2070.0137
GLU 2080.0119
PHE 2090.0123
GLU 2100.0110
GLY 2110.0158
ALA 2120.0130
ILE 2130.0138
ILE 2140.0182
ALA 2150.0181
LEU 2160.0136
PHE 2170.0130
HIS 2180.0098
LEU 2190.0037
LEU 2200.0054
ALA 2210.0062
THR 2220.0080
ARG 2230.0267
THR 2240.0519
ASP 2250.0408
LYS 2260.0120
VAL 2270.0133
ARG 2280.0070
ALA 2290.0152
LEU 2300.0158
ARG 2310.0122
GLU 2320.0277
ALA 2330.0272
PHE 2340.0124
TYR 2350.0091
ARG 2360.0076
GLN 2370.0072
ASN 2380.0085
LEU 2390.0116
PRO 2400.0096
ASN 2410.0024
LEU 2420.0074
MET 2430.0065
ASN 2440.0081
LEU 2450.0150
ILE 2460.0148
ALA 2470.0091
THR 2480.0142
ILE 2490.0174
PHE 2500.0107
VAL 2510.0099
PHE 2520.0149
ALA 2530.0105
VAL 2540.0041
VAL 2550.0075
ILE 2560.0080
TYR 2570.0047
PHE 2580.0153
GLN 2590.0117
GLY 2600.0099
PHE 2610.0141
ARG 2620.0141
VAL 2630.0134
ASP 2640.0138
LEU 2650.0093
PRO 2660.0075
ILE 2670.0099
LYS 2680.0085
SER 2690.0113
ALA 2700.0098
ARG 2710.0100
TYR 2720.0151
ARG 2730.0334
GLY 2740.0234
GLN 2750.0281
TYR 2760.0261
ASN 2770.0475
THR 2780.0272
TYR 2790.0264
PRO 2800.0196
ILE 2810.0214
LYS 2820.0234
LEU 2830.0203
PHE 2840.0197
TYR 2850.0175
THR 2860.0132
SER 2870.0145
ASN 2880.0144
ILE 2890.0094
PRO 2900.0084
ILE 2910.0108
ILE 2920.0092
LEU 2930.0082
GLN 2940.0087
SER 2950.0082
ALA 2960.0085
LEU 2970.0084
VAL 2980.0078
SER 2990.0080
ASN 3000.0075
LEU 3010.0075
TYR 3020.0062
VAL 3030.0043
ILE 3040.0033
SER 3050.0027
GLN 3060.0010
MET 3070.0044
LEU 3080.0035
SER 3090.0028
ALA 3100.0033
ARG 3110.0037
PHE 3120.0042
SER 3130.0049
GLY 3140.0049
ASN 3150.0037
LEU 3160.0021
LEU 3170.0057
VAL 3180.0087
SER 3190.0066
LEU 3200.0045
LEU 3210.0058
GLY 3220.0064
THR 3230.0076
TRP 3240.0067
SER 3250.0058
ASP 3260.0059
THR 3270.0077
SER 3280.0087
SER 3290.0136
GLY 3300.0184
GLY 3310.0174
PRO 3320.0175
ALA 3330.0160
ARG 3340.0140
ALA 3350.0132
TYR 3360.0127
PRO 3370.0080
VAL 3380.0074
GLY 3390.0055
GLY 3400.0050
LEU 3410.0051
CYS 3420.0045
HIS 3430.0043
TYR 3440.0023
LEU 3450.0023
SER 3460.0064
PRO 3470.0072
PRO 3480.0069
GLU 3490.0041
SER 3500.0073
PHE 3510.0112
GLY 3520.0144
SER 3530.0180
VAL 3540.0121
LEU 3550.0106
GLU 3560.0119
ASP 3570.0142
PRO 3580.0107
VAL 3590.0087
HIS 3600.0055
ALA 3610.0031
VAL 3620.0032
VAL 3630.0023
TYR 3640.0070
ILE 3650.0064
VAL 3660.0068
PHE 3670.0093
MET 3680.0107
LEU 3690.0109
GLY 3700.0115
SER 3710.0095
CYS 3720.0094
ALA 3730.0096
PHE 3740.0042
PHE 3750.0017
SER 3760.0043
LYS 3770.0060
THR 3780.0082
TRP 3790.0090
ILE 3800.0103
GLU 3810.0148
VAL 3820.0204
SER 3830.0191
GLY 3840.0159
SER 3850.0064
SER 3860.0094
ALA 3870.0110
LYS 3880.0165
ASP 3890.0156
VAL 3900.0115
ALA 3910.0122
LYS 3920.0167
GLN 3930.0108
LEU 3940.0079
LYS 3950.0137
GLU 3960.0165
GLN 3970.0120
GLN 3980.0071
MET 3990.0054
VAL 4000.0094
MET 4010.0082
ARG 4020.0090
GLY 4030.0144
HIS 4040.0141
ARG 4050.0077
GLU 4060.0201
THR 4070.0218
SER 4080.0126
MET 4090.0151
VAL 4100.0139
HIS 4110.0118
GLU 4120.0087
LEU 4130.0094
ASN 4140.0100
ARG 4150.0095
TYR 4160.0102
ILE 4170.0102
PRO 4180.0126
THR 4190.0116
ALA 4200.0172
ALA 4210.0182
ALA 4220.0196
PHE 4230.0188
GLY 4240.0199
GLY 4250.0172
LEU 4260.0200
CYS 4270.0227
ILE 4280.0201
GLY 4290.0192
ALA 4300.0189
LEU 4310.0185
SER 4320.0186
VAL 4330.0153
LEU 4340.0134
ALA 4350.0132
ASP 4360.0120
PHE 4370.0120
LEU 4380.0119
GLY 4390.0089
ALA 4400.0047
ILE 4410.0056
GLY 4420.0080
SER 4430.0085
GLY 4440.0050
THR 4450.0072
GLY 4460.0076
ILE 4470.0091
LEU 4480.0060
LEU 4490.0055
ALA 4500.0080
VAL 4510.0076
THR 4520.0055
ILE 4530.0073
ILE 4540.0081
TYR 4550.0078
GLN 4560.0068
TYR 4570.0074
PHE 4580.0085
GLU 4590.0083
ILE 4600.0032
PHE 4610.0036
VAL 4620.0027
LYS 4630.0058
GLU 4640.0055
GLN 4650.0054
SER 4660.0128
GLU 4670.0179
VAL 4680.0290
GLY 4690.0147
SER 4700.0223
MET 4710.0250
GLY 4720.0229
ALA 4730.0145
LEU 4740.0148
LEU 4750.0148
PHE 4760.0144
PHE 70.0157
VAL 80.0178
GLU 90.0095
PRO 100.0097
SER 110.0152
ARG 120.0217
GLN 130.0227
PHE 140.0117
VAL 150.0075
LYS 160.0203
ASP 170.0117
SER 180.0132
ILE 190.0214
ARG 200.0085
LEU 210.0138
VAL 220.0264
LYS 230.0212
ARG 240.0079
CYS 250.0068
THR 260.0053
LYS 270.0039
PRO 280.0071
ASP 290.0102
ARG 300.0134
LYS 310.0191
GLU 320.0097
PHE 330.0097
GLN 340.0186
LYS 350.0084
ILE 360.0143
ALA 370.0230
MET 380.0095
ALA 390.0156
THR 400.0151
ALA 410.0132
ILE 420.0138
GLY 430.0133
PHE 440.0120
ALA 450.0202
ILE 460.0284
MET 470.0227
GLY 480.0116
PHE 490.0252
ILE 500.0305
GLY 510.0247
PHE 520.0071
PHE 530.0040
VAL 540.0149
LYS 550.0137
LEU 560.0096
ILE 570.0061
HIS 580.0065
ILE 590.0079
PRO 600.0038
ILE 610.0087
ASN 620.0179
ASN 630.0168
ILE 640.0143
ILE 650.0143
VAL 660.0175
GLY 670.0134
GLY 680.0047
GLU 610.0182
ASP 620.0164
SER 630.0108
PRO 640.0073
GLY 650.0232
LEU 660.0233
LYS 670.0142
VAL 680.0178
GLY 690.0150
PRO 700.0145
VAL 710.0153
PRO 720.0250
VAL 730.0199
LEU 740.0200
VAL 750.0209
MET 760.0166
SER 770.0178
LEU 780.0203
LEU 790.0133
PHE 800.0091
ILE 810.0113
ALA 820.0109
SER 830.0060
VAL 840.0085
PHE 850.0107
MET 860.0114
LEU 870.0104
HIS 880.0101
ILE 890.0101
TRP 900.0104
GLY 910.0247
LYS 920.0307
TYR 930.0197
THR 940.0245
ARG 950.0217
SER 960.0299

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.