CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PROTEIN TRANSPORT 21-NOV-13 4CG7  ***

<R2> analysis for 2602160935392533103

---  normal mode 28  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0498
LYS 250.0409
ILE 260.0346
GLN 270.0310
PHE 280.0212
LYS 290.0233
GLU 300.0212
LYS 310.0136
VAL 320.0125
LEU 330.0132
TRP 340.0108
THR 350.0075
ALA 360.0065
ILE 370.0097
THR 380.0084
LEU 390.0078
PHE 400.0092
ILE 410.0075
PHE 420.0071
LEU 430.0065
VAL 440.0056
CYS 450.0047
CYS 460.0054
GLN 470.0052
ILE 480.0041
PRO 490.0033
LEU 500.0042
PHE 510.0086
GLY 520.0102
ILE 530.0161
MET 540.0203
SER 550.0228
SER 560.0155
ASP 570.0051
SER 580.0031
ALA 590.0050
ASP 600.0093
PRO 610.0116
PHE 620.0110
TYR 630.0103
TRP 640.0107
MET 650.0105
ARG 660.0105
VAL 670.0091
ILE 680.0093
LEU 690.0090
ALA 700.0063
SER 710.0053
ASN 720.0046
ARG 730.0044
GLY 740.0039
THR 750.0059
LEU 760.0077
MET 770.0056
GLU 780.0062
LEU 790.0059
GLY 800.0061
ILE 810.0072
SER 820.0089
PRO 830.0089
ILE 840.0082
VAL 850.0101
THR 860.0113
SER 870.0116
GLY 880.0121
LEU 890.0118
ILE 900.0127
MET 910.0127
GLN 920.0114
LEU 930.0102
LEU 940.0108
ALA 950.0126
GLY 960.0110
ALA 970.0103
LYS 980.0158
ILE 990.0146
ILE 1000.0337
GLU 1010.0326
VAL 1020.0195
GLY 1030.0162
ASP 1040.0272
THR 1050.0198
PRO 1060.0138
LYS 1070.0241
ASP 1080.0243
ARG 1090.0143
ALA 1100.0157
LEU 1110.0213
PHE 1120.0171
ASN 1130.0148
GLY 1140.0165
ALA 1150.0172
GLN 1160.0166
LYS 1170.0149
LEU 1180.0136
PHE 1190.0156
GLY 1200.0143
MET 1210.0116
ILE 1220.0133
ILE 1230.0124
THR 1240.0113
ILE 1250.0123
GLY 1260.0122
GLN 1270.0090
SER 1280.0089
ILE 1290.0099
VAL 1300.0085
TYR 1310.0083
VAL 1320.0094
MET 1330.0076
THR 1340.0068
GLY 1350.0090
MET 1360.0099
TYR 1370.0080
GLY 1380.0161
ASP 1390.0279
PRO 1400.0281
SER 1410.0289
GLU 1420.0474
MET 1430.0479
GLY 1440.0498
ALA 1450.0371
GLY 1460.0300
ILE 1470.0245
CYS 1480.0186
LEU 1490.0186
LEU 1500.0130
ILE 1510.0105
THR 1520.0126
ILE 1530.0107
GLN 1540.0055
LEU 1550.0060
PHE 1560.0078
VAL 1570.0041
ALA 1580.0026
GLY 1590.0044
LEU 1600.0061
ILE 1610.0061
VAL 1620.0056
LEU 1630.0055
LEU 1640.0059
LEU 1650.0061
ASP 1660.0061
GLU 1670.0068
LEU 1680.0057
LEU 1690.0058
GLN 1700.0064
LYS 1710.0063
GLY 1720.0056
TYR 1730.0064
GLY 1740.0075
LEU 1750.0089
GLY 1760.0085
SER 1770.0075
GLY 1780.0061
ILE 1790.0057
SER 1800.0049
LEU 1810.0046
PHE 1820.0065
ILE 1830.0058
ALA 1840.0065
THR 1850.0063
ASN 1860.0061
ILE 1870.0082
CYS 1880.0074
GLU 1890.0074
THR 1900.0080
ILE 1910.0076
VAL 1920.0088
TRP 1930.0090
LYS 1940.0097
ALA 1950.0109
PHE 1960.0111
SER 1970.0137
PRO 1980.0151
THR 1990.0312
THR 2000.0414
VAL 2010.0401
ASN 2020.0431
THR 2030.0351
GLY 2040.0260
ARG 2050.0186
GLY 2060.0178
MET 2070.0143
GLU 2080.0148
PHE 2090.0150
GLU 2100.0165
GLY 2110.0148
ALA 2120.0154
ILE 2130.0149
ILE 2140.0141
ALA 2150.0148
LEU 2160.0159
PHE 2170.0154
HIS 2180.0151
LEU 2190.0173
LEU 2200.0172
ALA 2210.0141
THR 2220.0186
ARG 2230.0203
THR 2240.0155
ASP 2250.0106
LYS 2260.0097
VAL 2270.0109
ARG 2280.0115
ALA 2290.0120
LEU 2300.0107
ARG 2310.0107
GLU 2320.0139
ALA 2330.0151
PHE 2340.0137
TYR 2350.0103
ARG 2360.0100
GLN 2370.0106
ASN 2380.0111
LEU 2390.0100
PRO 2400.0122
ASN 2410.0142
LEU 2420.0126
MET 2430.0126
ASN 2440.0135
LEU 2450.0152
ILE 2460.0141
ALA 2470.0132
THR 2480.0137
ILE 2490.0142
PHE 2500.0130
VAL 2510.0120
PHE 2520.0125
ALA 2530.0130
VAL 2540.0116
VAL 2550.0097
ILE 2560.0095
TYR 2570.0094
PHE 2580.0062
GLN 2590.0039
GLY 2600.0043
PHE 2610.0032
ARG 2620.0040
VAL 2630.0047
ASP 2640.0057
LEU 2650.0107
PRO 2660.0093
ILE 2670.0112
LYS 2680.0135
SER 2690.0079
ALA 2700.0030
ARG 2710.0053
TYR 2720.0101
ARG 2730.0075
GLY 2740.0099
GLN 2750.0117
TYR 2760.0130
ASN 2770.0127
THR 2780.0121
TYR 2790.0104
PRO 2800.0077
ILE 2810.0077
LYS 2820.0081
LEU 2830.0064
PHE 2840.0050
TYR 2850.0061
THR 2860.0091
SER 2870.0081
ASN 2880.0080
ILE 2890.0108
PRO 2900.0105
ILE 2910.0090
ILE 2920.0093
LEU 2930.0108
GLN 2940.0103
SER 2950.0101
ALA 2960.0116
LEU 2970.0113
VAL 2980.0108
SER 2990.0110
ASN 3000.0116
LEU 3010.0108
TYR 3020.0095
VAL 3030.0098
ILE 3040.0091
SER 3050.0077
GLN 3060.0060
MET 3070.0048
LEU 3080.0065
SER 3090.0050
ALA 3100.0092
ARG 3110.0091
PHE 3120.0173
SER 3130.0226
GLY 3140.0262
ASN 3150.0243
LEU 3160.0276
LEU 3170.0223
VAL 3180.0164
SER 3190.0115
LEU 3200.0127
LEU 3210.0114
GLY 3220.0033
THR 3230.0046
TRP 3240.0062
SER 3250.0041
ASP 3260.0081
THR 3270.0094
SER 3280.0066
SER 3290.0064
GLY 3300.0076
GLY 3310.0081
PRO 3320.0098
ALA 3330.0104
ARG 3340.0098
ALA 3350.0092
TYR 3360.0084
PRO 3370.0080
VAL 3380.0100
GLY 3390.0093
GLY 3400.0077
LEU 3410.0086
CYS 3420.0092
HIS 3430.0092
TYR 3440.0101
LEU 3450.0104
SER 3460.0100
PRO 3470.0099
PRO 3480.0099
GLU 3490.0101
SER 3500.0099
PHE 3510.0095
GLY 3520.0102
SER 3530.0104
VAL 3540.0098
LEU 3550.0107
GLU 3560.0108
ASP 3570.0104
PRO 3580.0112
VAL 3590.0106
HIS 3600.0101
ALA 3610.0105
VAL 3620.0104
VAL 3630.0092
TYR 3640.0090
ILE 3650.0095
VAL 3660.0082
PHE 3670.0070
MET 3680.0083
LEU 3690.0073
GLY 3700.0057
SER 3710.0075
CYS 3720.0084
ALA 3730.0076
PHE 3740.0081
PHE 3750.0099
SER 3760.0097
LYS 3770.0103
THR 3780.0126
TRP 3790.0134
ILE 3800.0138
GLU 3810.0159
VAL 3820.0177
SER 3830.0167
GLY 3840.0146
SER 3850.0115
SER 3860.0113
ALA 3870.0098
LYS 3880.0078
ASP 3890.0064
VAL 3900.0052
ALA 3910.0017
LYS 3920.0054
GLN 3930.0084
LEU 3940.0047
LYS 3950.0096
GLU 3960.0142
GLN 3970.0115
GLN 3980.0080
MET 3990.0016
VAL 4000.0080
MET 4010.0096
ARG 4020.0103
GLY 4030.0177
HIS 4040.0200
ARG 4050.0247
GLU 4060.0275
THR 4070.0208
SER 4080.0162
MET 4090.0100
VAL 4100.0053
HIS 4110.0092
GLU 4120.0113
LEU 4130.0100
ASN 4140.0089
ARG 4150.0110
TYR 4160.0098
ILE 4170.0101
PRO 4180.0110
THR 4190.0088
ALA 4200.0073
ALA 4210.0084
ALA 4220.0073
PHE 4230.0042
GLY 4240.0061
GLY 4250.0073
LEU 4260.0056
CYS 4270.0059
ILE 4280.0080
GLY 4290.0078
ALA 4300.0086
LEU 4310.0099
SER 4320.0100
VAL 4330.0094
LEU 4340.0103
ALA 4350.0106
ASP 4360.0100
PHE 4370.0100
LEU 4380.0109
GLY 4390.0103
ALA 4400.0098
ILE 4410.0102
GLY 4420.0101
SER 4430.0093
GLY 4440.0082
THR 4450.0081
GLY 4460.0081
ILE 4470.0082
LEU 4480.0086
LEU 4490.0071
ALA 4500.0084
VAL 4510.0081
THR 4520.0069
ILE 4530.0070
ILE 4540.0074
TYR 4550.0068
GLN 4560.0066
TYR 4570.0073
PHE 4580.0072
GLU 4590.0081
ILE 4600.0127
PHE 4610.0127
VAL 4620.0163
LYS 4630.0175
GLU 4640.0131
GLN 4650.0153
SER 4660.0192
GLU 4670.0264
VAL 4680.0311
GLY 4690.0322
SER 4700.0302
MET 4710.0327
GLY 4720.0298
ALA 4730.0231
LEU 4740.0239
LEU 4750.0244
PHE 4760.0274
PHE 70.0323
VAL 80.0100
GLU 90.0193
PRO 100.0175
SER 110.0076
ARG 120.0189
GLN 130.0133
PHE 140.0037
VAL 150.0103
LYS 160.0114
ASP 170.0060
SER 180.0047
ILE 190.0069
ARG 200.0061
LEU 210.0022
VAL 220.0059
LYS 230.0083
ARG 240.0053
CYS 250.0082
THR 260.0103
LYS 270.0105
PRO 280.0108
ASP 290.0176
ARG 300.0214
LYS 310.0179
GLU 320.0117
PHE 330.0139
GLN 340.0158
LYS 350.0097
ILE 360.0082
ALA 370.0130
MET 380.0127
ALA 390.0105
THR 400.0116
ALA 410.0129
ILE 420.0135
GLY 430.0133
PHE 440.0110
ALA 450.0099
ILE 460.0129
MET 470.0123
GLY 480.0107
PHE 490.0120
ILE 500.0154
GLY 510.0157
PHE 520.0149
PHE 530.0170
VAL 540.0197
LYS 550.0177
LEU 560.0216
ILE 570.0273
HIS 580.0238
ILE 590.0213
PRO 600.0287
ILE 610.0343
ASN 620.0322
ASN 630.0364
ILE 640.0373
ILE 650.0299
VAL 660.0286
GLY 670.0349
GLY 680.0346
GLU 610.0246
ASP 620.0255
SER 630.0331
PRO 640.0294
GLY 650.0315
LEU 660.0278
LYS 670.0187
VAL 680.0188
GLY 690.0229
PRO 700.0266
VAL 710.0222
PRO 720.0186
VAL 730.0120
LEU 740.0110
VAL 750.0105
MET 760.0052
SER 770.0039
LEU 780.0054
LEU 790.0020
PHE 800.0024
ILE 810.0041
ALA 820.0072
SER 830.0090
VAL 840.0094
PHE 850.0127
MET 860.0151
LEU 870.0135
HIS 880.0097
ILE 890.0112
TRP 900.0100
GLY 910.0135
LYS 920.0129
TYR 930.0118
THR 940.0177
ARG 950.0211
SER 960.0236

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.