CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 18-AUG-21 7PHT  ***

Normal Mode Analysis for ID 2602161142392562866

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6520
mode 8 1.20 0.5801
mode 9 1.59 0.5567
mode 10 2.44 0.6058
mode 11 2.70 0.6388
mode 12 3.19 0.5444
mode 13 3.26 0.6071
mode 14 4.08 0.0247
mode 15 4.21 0.5114
mode 16 4.39 0.5728
mode 17 4.61 0.0348
mode 18 4.99 0.0101
mode 19 5.02 0.6093
mode 20 5.20 0.0054
mode 21 5.33 0.0216
mode 22 5.42 0.0654
mode 23 5.50 0.0117
mode 24 5.55 0.2447
mode 25 5.63 0.0110
mode 26 5.76 0.0276
mode 27 5.79 0.0657
mode 28 5.81 0.0157
mode 29 5.89 0.0207
mode 30 5.92 0.0181
mode 31 5.97 0.0786
mode 32 6.00 0.0677
mode 33 6.09 0.0310
mode 34 6.13 0.0273
mode 35 6.17 0.0130
mode 36 6.18 0.0206
mode 37 6.31 0.0146
mode 38 6.36 0.0138
mode 39 6.40 0.0216
mode 40 6.42 0.0127
mode 41 6.52 0.0187
mode 42 6.63 0.0392
mode 43 6.70 0.0607
mode 44 6.80 0.1570
mode 45 6.84 0.0210
mode 46 6.93 0.0173
mode 47 6.96 0.0095
mode 48 6.99 0.0215
mode 49 7.05 0.0415
mode 50 7.08 0.0503
mode 51 7.12 0.0265
mode 52 7.13 0.0212
mode 53 7.17 0.1487
mode 54 7.20 0.0516
mode 55 7.23 0.0223
mode 56 7.28 0.1394
mode 57 7.31 0.0891
mode 58 7.37 0.0728
mode 59 7.39 0.0181
mode 60 7.42 0.0153
mode 61 7.43 0.0156
mode 62 7.44 0.0467
mode 63 7.45 0.0346
mode 64 7.47 0.0365
mode 65 7.49 0.0214
mode 66 7.50 0.0184
mode 67 7.58 0.0307
mode 68 7.59 0.0307
mode 69 7.59 0.0107
mode 70 7.63 0.0828
mode 71 7.68 0.0186
mode 72 7.69 0.0060
mode 73 7.72 0.0620
mode 74 7.78 0.0268
mode 75 7.79 0.0383
mode 76 7.85 0.0169
mode 77 7.87 0.0754
mode 78 7.93 0.0462
mode 79 7.94 0.0210
mode 80 7.95 0.1163
mode 81 7.99 0.1052
mode 82 8.04 0.0145
mode 83 8.09 0.0457
mode 84 8.10 0.0238
mode 85 8.12 0.0253
mode 86 8.14 0.0282
mode 87 8.19 0.0114
mode 88 8.22 0.0354
mode 89 8.24 0.0547
mode 90 8.28 0.0395
mode 91 8.30 0.0225
mode 92 8.33 0.0469
mode 93 8.37 0.0213
mode 94 8.44 0.0140
mode 95 8.45 0.0208
mode 96 8.50 0.0403
mode 97 8.51 0.0098
mode 98 8.52 0.0258
mode 99 8.54 0.0711
mode 100 8.56 0.0590
mode 101 8.61 0.0139
mode 102 8.62 0.0729
mode 103 8.63 0.0869
mode 104 8.65 0.0338
mode 105 8.65 0.0409
mode 106 8.66 0.1975

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.